RNA–Protein interactions for RNA: ENST00000346452.8

RHCE-203, Transcript of Rh blood group CcEe antigens, humanhuman

TSL 1 (best) BASIC

Gene RHCE, Length 971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHCE-203ENST00000346452 NISCHQ9Y2I1 1504 aa30.83■■■□□ 2.53
RHCE-203ENST00000346452 CCDC180Q9P1Z9 1646 aa27.15■■□□□ 1.94
RHCE-203ENST00000346452 ABCC9O60706 1549 aa26.98■■□□□ 1.91
RHCE-203ENST00000346452 AEBP2Q6ZN18 517 aaPredicted RBP26.95■■□□□ 1.9
RHCE-203ENST00000346452 ZCCHC6Q5VYS8 1495 aaKnown RBP25.79■■□□□ 1.72
RHCE-203ENST00000346452 DCAF8L2P0C7V8 631 aa25.63■■□□□ 1.69
RHCE-203ENST00000346452 DCAF1Q9Y4B6 1507 aa25.57■■□□□ 1.68
RHCE-203ENST00000346452 RB1CC1Q8TDY2 1594 aa25.54■■□□□ 1.68
RHCE-203ENST00000346452 MYO15BQ96JP2 1530 aa25.47■■□□□ 1.67
RHCE-203ENST00000346452 NACADO15069 1562 aa25.43■■□□□ 1.66
RHCE-203ENST00000346452 CHIC1Q5VXU3 224 aa25.41■■□□□ 1.66
RHCE-203ENST00000346452 DNAJC5BQ9UF47 199 aa25.3■■□□□ 1.64
RHCE-203ENST00000346452 PABPN1Q86U42 306 aaKnown RBP eCLIP25.18■■□□□ 1.62
RHCE-203ENST00000346452 UNC13AQ9UPW8 1703 aa24.96■■□□□ 1.59
RHCE-203ENST00000346452 SCRIBQ14160 1630 aa24.79■■□□□ 1.56
RHCE-203ENST00000346452 BICRAQ9NZM4 1560 aa24.76■■□□□ 1.55
RHCE-203ENST00000346452 SHROOM4Q9ULL8 1493 aa24.72■■□□□ 1.55
RHCE-203ENST00000346452 CC2D2AQ9P2K1 1620 aa24.28■■□□□ 1.48
RHCE-203ENST00000346452 CECR2Q9BXF3 1484 aa24.25■■□□□ 1.47
RHCE-203ENST00000346452 EIF4G1Q04637 1599 aaKnown RBP24.2■■□□□ 1.46
RHCE-203ENST00000346452 BAZ1AQ9NRL2 1556 aaPredicted RBP23.9■■□□□ 1.42
RHCE-203ENST00000346452 SMARCA4P51532 1647 aa23.77■■□□□ 1.4
RHCE-203ENST00000346452 MROH2BQ7Z745 1585 aa23.74■■□□□ 1.39
RHCE-203ENST00000346452 RSF1Q96T23 1441 aaPredicted RBP23.72■■□□□ 1.39
RHCE-203ENST00000346452 SUPT5HO00267 1087 aaKnown RBP23.63■■□□□ 1.37
RHCE-203ENST00000346452 SMARCA2P51531 1590 aa23.57■■□□□ 1.36
RHCE-203ENST00000346452 PEG3Q9GZU2 1588 aa23.55■■□□□ 1.36
RHCE-203ENST00000346452 ATAD2BQ9ULI0 1458 aa23.53■■□□□ 1.36
RHCE-203ENST00000346452 WIZO95785 1651 aa23.5■■□□□ 1.35
RHCE-203ENST00000346452 NCAPD3P42695 1498 aa23.45■■□□□ 1.34
RHCE-203ENST00000346452 BAZ1BQ9UIG0 1483 aaKnown RBP23.4■■□□□ 1.34
RHCE-203ENST00000346452 HMGXB3Q12766 1538 aa23.37■■□□□ 1.33
RHCE-203ENST00000346452 TOP2AP11388 1531 aaKnown RBP23.33■■□□□ 1.33
RHCE-203ENST00000346452 ERCC6Q03468 1493 aa23.31■■□□□ 1.32
RHCE-203ENST00000346452 SENP3Q9H4L4 574 aaPredicted RBP23.24■■□□□ 1.31
RHCE-203ENST00000346452 DNAJC5Q9H3Z4 198 aa23.21■■□□□ 1.31
RHCE-203ENST00000346452 NESP48681 1621 aa23.14■■□□□ 1.29
RHCE-203ENST00000346452 CUX2O14529 1486 aa23.12■■□□□ 1.29
RHCE-203ENST00000346452 CCDC88BA6NC98 1476 aa23.06■■□□□ 1.28
RHCE-203ENST00000346452 LAMC3Q9Y6N6 1575 aa22.86■■□□□ 1.25
RHCE-203ENST00000346452 PHF23Q9BUL5 403 aaPredicted RBP22.83■■□□□ 1.25
RHCE-203ENST00000346452 CADPSQ9ULU8 1353 aa22.82■■□□□ 1.24
RHCE-203ENST00000346452 THOC2Q8NI27 1593 aaKnown RBP22.8■■□□□ 1.24
RHCE-203ENST00000346452 KIF21AQ7Z4S6 1674 aa22.8■■□□□ 1.24
RHCE-203ENST00000346452 PDS5BQ9NTI5 1447 aa22.79■■□□□ 1.24
RHCE-203ENST00000346452 CFTRP13569 1480 aa22.78■■□□□ 1.24
RHCE-203ENST00000346452 PRDM2Q13029 1718 aa22.6■■□□□ 1.21
RHCE-203ENST00000346452 MRC2Q9UBG0 1479 aa22.59■■□□□ 1.21
RHCE-203ENST00000346452 FANCD2Q9BXW9 1451 aa22.53■■□□□ 1.2
RHCE-203ENST00000346452 CEP164Q9UPV0 1460 aa22.52■■□□□ 1.2
RHCE-203ENST00000346452 WDR62O43379 1518 aa22.47■■□□□ 1.19
RHCE-203ENST00000346452 TRIM41Q8WV44 630 aa22.41■■□□□ 1.18
RHCE-203ENST00000346452 WRNQ14191 1432 aaPredicted RBP eCLIP22.39■■□□□ 1.17
RHCE-203ENST00000346452 ABCC8Q09428 1581 aa22.35■■□□□ 1.17
RHCE-203ENST00000346452 URB2Q14146 1524 aaKnown RBP22.28■■□□□ 1.16
RHCE-203ENST00000346452 DNMBPQ6XZF7 1577 aa22.25■■□□□ 1.15
RHCE-203ENST00000346452 CUX1P39880 1505 aa22.23■■□□□ 1.15
RHCE-203ENST00000346452 TOP2BQ02880 1626 aa22.23■■□□□ 1.15
RHCE-203ENST00000346452 TOPBP1Q92547 1522 aa22.22■■□□□ 1.15
RHCE-203ENST00000346452 SYNJ1O43426 1573 aa22.21■■□□□ 1.15
RHCE-203ENST00000346452 BIVM-ERCC5R4GMW8 1640 aa22.2■■□□□ 1.14
RHCE-203ENST00000346452 OSCARQ8IYS5 282 aa22.18■■□□□ 1.14
RHCE-203ENST00000346452 FGD5Q6ZNL6 1462 aa22.1■■□□□ 1.13
RHCE-203ENST00000346452 POLA1P09884 1462 aaPredicted RBP22.06■■□□□ 1.12
RHCE-203ENST00000346452 ZNF608Q9ULD9 1512 aaPredicted RBP22.05■■□□□ 1.12
RHCE-203ENST00000346452 SOGA1O94964 1423 aa22.04■■□□□ 1.12
RHCE-203ENST00000346452 IFT140Q96RY7 1462 aa22.03■■□□□ 1.12
RHCE-203ENST00000346452 RAD54L2Q9Y4B4 1467 aa21.95■■□□□ 1.1
RHCE-203ENST00000346452 ABCA10Q8WWZ4 1543 aa21.94■■□□□ 1.1
RHCE-203ENST00000346452 EEA1Q15075 1411 aa21.92■■□□□ 1.1
RHCE-203ENST00000346452 KIF27Q86VH2 1401 aa21.91■■□□□ 1.1
RHCE-203ENST00000346452 FBLN2P98095 1184 aa21.9■■□□□ 1.1
RHCE-203ENST00000346452 EIF4G3O43432 1585 aaKnown RBP21.9■■□□□ 1.1
RHCE-203ENST00000346452 TARBP1Q13395 1621 aaKnown RBP21.88■■□□□ 1.09
RHCE-203ENST00000346452 AQRO60306 1485 aaKnown RBP eCLIP21.88■■□□□ 1.093e-7■■■□□ 17
RHCE-203ENST00000346452 RIMBP3CA6NJZ7 1639 aa21.85■■□□□ 1.09
RHCE-203ENST00000346452 RIMBP3BA6NNM3 1639 aa21.85■■□□□ 1.09
RHCE-203ENST00000346452 RIMBP3Q9UFD9 1639 aa21.85■■□□□ 1.09
RHCE-203ENST00000346452 WDR97A6NE52 1622 aa21.84■■□□□ 1.09
RHCE-203ENST00000346452 FAM9AQ8IZU1 332 aaPredicted RBP21.81■■□□□ 1.08
RHCE-203ENST00000346452 TDRD9Q8NDG6 1382 aaKnown RBP21.81■■□□□ 1.08
RHCE-203ENST00000346452 CSRNP3Q8WYN3 585 aa21.79■■□□□ 1.08
RHCE-203ENST00000346452 GAPVD1Q14C86 1478 aa21.78■■□□□ 1.08
RHCE-203ENST00000346452 CHD1O14646 1710 aa21.77■■□□□ 1.08
RHCE-203ENST00000346452 ARHGEF11O15085 1522 aa21.76■■□□□ 1.07
RHCE-203ENST00000346452 RUSC2Q8N2Y8 1516 aa21.76■■□□□ 1.07
RHCE-203ENST00000346452 CYB5RLQ6IPT4 315 aa21.75■■□□□ 1.07
RHCE-203ENST00000346452 ABCA5Q8WWZ7 1642 aa21.74■■□□□ 1.07
RHCE-203ENST00000346452 GRIN2BQ13224 1484 aa21.71■■□□□ 1.07
RHCE-203ENST00000346452 IGF1RP08069 1367 aa21.7■■□□□ 1.06
RHCE-203ENST00000346452 ERICH3Q5RHP9 1530 aa21.7■■□□□ 1.06
RHCE-203ENST00000346452 SNAPC4Q5SXM2 1469 aa21.64■■□□□ 1.06
RHCE-203ENST00000346452 CHMP7Q8WUX9 453 aaPredicted RBP21.63■■□□□ 1.05
RHCE-203ENST00000346452 PBRM1Q86U86 1689 aa21.62■■□□□ 1.05
RHCE-203ENST00000346452 CARMIL1Q5VZK9 1371 aa21.61■■□□□ 1.05
RHCE-203ENST00000346452 CUL7Q14999 1698 aa21.6■■□□□ 1.05
RHCE-203ENST00000346452 TRHP20396 242 aaPredicted RBP21.6■■□□□ 1.05
RHCE-203ENST00000346452 FOXD1Q16676 465 aa21.59■■□□□ 1.05
RHCE-203ENST00000346452 MAGI1Q96QZ7 1491 aaPredicted RBP21.58■■□□□ 1.05
RHCE-203ENST00000346452 PRXQ9BXM0 1461 aa21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms