RNA–Protein interactions for RNA: ENST00000497720.1

THBS1-206, Transcript of thrombospondin 1, humanhuman

TSL 2

Gene THBS1, Length 527 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1-206ENST00000497720 NISCHQ9Y2I1 1504 aa22.47■■□□□ 1.19
THBS1-206ENST00000497720 ABCC9O60706 1549 aa20.57■□□□□ 0.88
THBS1-206ENST00000497720 CCDC180Q9P1Z9 1646 aa20.27■□□□□ 0.84
THBS1-206ENST00000497720 DNAJC5BQ9UF47 199 aa19.52■□□□□ 0.72
THBS1-206ENST00000497720 RB1CC1Q8TDY2 1594 aa19.41■□□□□ 0.7
THBS1-206ENST00000497720 NACADO15069 1562 aa19.19■□□□□ 0.66
THBS1-206ENST00000497720 PABPN1Q86U42 306 aaKnown RBP eCLIP19.07■□□□□ 0.64
THBS1-206ENST00000497720 UNC13AQ9UPW8 1703 aa19.06■□□□□ 0.64
THBS1-206ENST00000497720 DCAF8L2P0C7V8 631 aa19.03■□□□□ 0.64
THBS1-206ENST00000497720 BICRAQ9NZM4 1560 aa18.91■□□□□ 0.62
THBS1-206ENST00000497720 MYO15BQ96JP2 1530 aa18.84■□□□□ 0.61
THBS1-206ENST00000497720 ZCCHC6Q5VYS8 1495 aaKnown RBP18.64■□□□□ 0.57
THBS1-206ENST00000497720 DCAF1Q9Y4B6 1507 aa18.62■□□□□ 0.57
THBS1-206ENST00000497720 CC2D2AQ9P2K1 1620 aa18.56■□□□□ 0.56
THBS1-206ENST00000497720 SHROOM4Q9ULL8 1493 aa18.53■□□□□ 0.56
THBS1-206ENST00000497720 CECR2Q9BXF3 1484 aa18.52■□□□□ 0.56
THBS1-206ENST00000497720 SCRIBQ14160 1630 aa18.51■□□□□ 0.55
THBS1-206ENST00000497720 EIF4G1Q04637 1599 aaKnown RBP18.44■□□□□ 0.54
THBS1-206ENST00000497720 DNAJC5Q9H3Z4 198 aa18.06■□□□□ 0.48
THBS1-206ENST00000497720 CUX2O14529 1486 aa17.78■□□□□ 0.44
THBS1-206ENST00000497720 ERCC6Q03468 1493 aa17.75■□□□□ 0.43
THBS1-206ENST00000497720 NCAPD3P42695 1498 aa17.7■□□□□ 0.42
THBS1-206ENST00000497720 ATAD2BQ9ULI0 1458 aa17.64■□□□□ 0.41
THBS1-206ENST00000497720 NESP48681 1621 aa17.61■□□□□ 0.41
THBS1-206ENST00000497720 SMARCA4P51532 1647 aa17.59■□□□□ 0.41
THBS1-206ENST00000497720 HMGXB3Q12766 1538 aa17.59■□□□□ 0.41
THBS1-206ENST00000497720 SMARCA2P51531 1590 aa17.57■□□□□ 0.4
THBS1-206ENST00000497720 THOC2Q8NI27 1593 aaKnown RBP17.49■□□□□ 0.39
THBS1-206ENST00000497720 BAZ1BQ9UIG0 1483 aaKnown RBP17.46■□□□□ 0.39
THBS1-206ENST00000497720 BAZ1AQ9NRL2 1556 aaPredicted RBP17.45■□□□□ 0.38
THBS1-206ENST00000497720 KIF21AQ7Z4S6 1674 aa17.39■□□□□ 0.37
THBS1-206ENST00000497720 PEG3Q9GZU2 1588 aa17.39■□□□□ 0.37
THBS1-206ENST00000497720 LAMC3Q9Y6N6 1575 aa17.38■□□□□ 0.37
THBS1-206ENST00000497720 MROH2BQ7Z745 1585 aa17.32■□□□□ 0.36
THBS1-206ENST00000497720 PDS5BQ9NTI5 1447 aa17.25■□□□□ 0.35
THBS1-206ENST00000497720 TRIM41Q8WV44 630 aa17.21■□□□□ 0.35
THBS1-206ENST00000497720 MRC2Q9UBG0 1479 aa17.17■□□□□ 0.34
THBS1-206ENST00000497720 CADPSQ9ULU8 1353 aa17.15■□□□□ 0.34
THBS1-206ENST00000497720 WDR62O43379 1518 aa17.15■□□□□ 0.34
THBS1-206ENST00000497720 WIZO95785 1651 aa17.12■□□□□ 0.33
THBS1-206ENST00000497720 CEP164Q9UPV0 1460 aa17.05■□□□□ 0.32
THBS1-206ENST00000497720 FANCD2Q9BXW9 1451 aa17■□□□□ 0.31
THBS1-206ENST00000497720 RSF1Q96T23 1441 aaPredicted RBP16.96■□□□□ 0.3
THBS1-206ENST00000497720 CFTRP13569 1480 aa16.92■□□□□ 0.3
THBS1-206ENST00000497720 URB2Q14146 1524 aaKnown RBP16.91■□□□□ 0.3
THBS1-206ENST00000497720 TOP2AP11388 1531 aaKnown RBP16.9■□□□□ 0.3
THBS1-206ENST00000497720 OSCARQ8IYS5 282 aa16.88■□□□□ 0.29
THBS1-206ENST00000497720 RIMBP3CA6NJZ7 1639 aa16.81■□□□□ 0.28
THBS1-206ENST00000497720 RIMBP3BA6NNM3 1639 aa16.81■□□□□ 0.28
THBS1-206ENST00000497720 RIMBP3Q9UFD9 1639 aa16.81■□□□□ 0.28
THBS1-206ENST00000497720 PRDM2Q13029 1718 aa16.8■□□□□ 0.28
THBS1-206ENST00000497720 ZNF608Q9ULD9 1512 aaPredicted RBP16.75■□□□□ 0.27
THBS1-206ENST00000497720 ARHGEF11O15085 1522 aa16.7■□□□□ 0.26
THBS1-206ENST00000497720 IFT140Q96RY7 1462 aa16.69■□□□□ 0.26
THBS1-206ENST00000497720 CCDC88BA6NC98 1476 aa16.68■□□□□ 0.26
THBS1-206ENST00000497720 EIF4G3O43432 1585 aaKnown RBP16.66■□□□□ 0.26
THBS1-206ENST00000497720 TOPBP1Q92547 1522 aa16.65■□□□□ 0.26
THBS1-206ENST00000497720 CHD1O14646 1710 aa16.61■□□□□ 0.25
THBS1-206ENST00000497720 DNMBPQ6XZF7 1577 aa16.57■□□□□ 0.24
THBS1-206ENST00000497720 TARBP1Q13395 1621 aaKnown RBP16.55■□□□□ 0.24
THBS1-206ENST00000497720 CYB5RLQ6IPT4 315 aa16.54■□□□□ 0.24
THBS1-206ENST00000497720 AQRO60306 1485 aaKnown RBP eCLIP16.54■□□□□ 0.24
THBS1-206ENST00000497720 ARAP1Q96P48 1450 aa16.54■□□□□ 0.24
THBS1-206ENST00000497720 ABCC8Q09428 1581 aa16.52■□□□□ 0.24
THBS1-206ENST00000497720 POLA1P09884 1462 aaPredicted RBP16.48■□□□□ 0.23
THBS1-206ENST00000497720 FBLN2P98095 1184 aa16.46■□□□□ 0.23
THBS1-206ENST00000497720 TRHP20396 242 aaPredicted RBP16.45■□□□□ 0.22
THBS1-206ENST00000497720 RAD54L2Q9Y4B4 1467 aa16.43■□□□□ 0.22
THBS1-206ENST00000497720 TDRD9Q8NDG6 1382 aaKnown RBP16.38■□□□□ 0.21
THBS1-206ENST00000497720 SNAPC4Q5SXM2 1469 aa16.38■□□□□ 0.21
THBS1-206ENST00000497720 CLASP1Q7Z460 1538 aa16.37■□□□□ 0.21
THBS1-206ENST00000497720 SOGA1O94964 1423 aa16.35■□□□□ 0.21
THBS1-206ENST00000497720 FGD5Q6ZNL6 1462 aa16.34■□□□□ 0.21
THBS1-206ENST00000497720 SYNJ1O43426 1573 aa16.31■□□□□ 0.2
THBS1-206ENST00000497720 WDR97A6NE52 1622 aa16.3■□□□□ 0.2
THBS1-206ENST00000497720 CUX1P39880 1505 aa16.29■□□□□ 0.2
THBS1-206ENST00000497720 MAGI1Q96QZ7 1491 aaPredicted RBP16.28■□□□□ 0.2
THBS1-206ENST00000497720 CHMP7Q8WUX9 453 aaPredicted RBP16.26■□□□□ 0.19
THBS1-206ENST00000497720 GRIN2BQ13224 1484 aa16.25■□□□□ 0.19
THBS1-206ENST00000497720 PBRM1Q86U86 1689 aa16.24■□□□□ 0.19
THBS1-206ENST00000497720 SYNJ2O15056 1496 aa16.23■□□□□ 0.19
THBS1-206ENST00000497720 SUPT5HO00267 1087 aaKnown RBP16.2■□□□□ 0.18
THBS1-206ENST00000497720 GAPVD1Q14C86 1478 aa16.18■□□□□ 0.18
THBS1-206ENST00000497720 ABCA5Q8WWZ7 1642 aa16.16■□□□□ 0.18
THBS1-206ENST00000497720 AEBP2Q6ZN18 517 aaPredicted RBP16.15■□□□□ 0.18
THBS1-206ENST00000497720 ERCC6L2Q5T890 1561 aa16.13■□□□□ 0.17
THBS1-206ENST00000497720 ABCA10Q8WWZ4 1543 aa16.1■□□□□ 0.17
THBS1-206ENST00000497720 ADAMTS12P58397 1594 aa16.06■□□□□ 0.16
THBS1-206ENST00000497720 CEP170Q5SW79 1584 aa16.06■□□□□ 0.16
THBS1-206ENST00000497720 GRIN2AQ12879 1464 aa16.06■□□□□ 0.16
THBS1-206ENST00000497720 BIVM-ERCC5R4GMW8 1640 aa16.05■□□□□ 0.16
THBS1-206ENST00000497720 TOP2BQ02880 1626 aa16.04■□□□□ 0.16
THBS1-206ENST00000497720 WRNQ14191 1432 aaPredicted RBP eCLIP16.02■□□□□ 0.15
THBS1-206ENST00000497720 NUP160Q12769 1436 aa16.01■□□□□ 0.15
THBS1-206ENST00000497720 SHROOM2Q13796 1616 aa16■□□□□ 0.15
THBS1-206ENST00000497720 KIF13AQ9H1H9 1805 aa15.97■□□□□ 0.15
THBS1-206ENST00000497720 FHAD1B1AJZ9 1412 aa15.94■□□□□ 0.14
THBS1-206ENST00000497720 ERICH3Q5RHP9 1530 aa15.89■□□□□ 0.13
THBS1-206ENST00000497720 PRG4Q92954 1404 aaPredicted RBP15.88■□□□□ 0.13
THBS1-206ENST00000497720 RUSC2Q8N2Y8 1516 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms