RNA–Protein interactions for RNA: ENST00000402681.7

C1S-203, Transcript of complement C1s, humanhuman

TSL 1 (best) BASIC

Gene C1S, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1S-203ENST00000402681 NISCHQ9Y2I1 1504 aa27.15■■□□□ 1.94
C1S-203ENST00000402681 CCDC180Q9P1Z9 1646 aa23.35■■□□□ 1.33
C1S-203ENST00000402681 ZCCHC6Q5VYS8 1495 aaKnown RBP22.88■■□□□ 1.25
C1S-203ENST00000402681 SHROOM4Q9ULL8 1493 aa22.57■■□□□ 1.2
C1S-203ENST00000402681 DCAF8L2P0C7V8 631 aa22.41■■□□□ 1.18
C1S-203ENST00000402681 DCAF1Q9Y4B6 1507 aa22.4■■□□□ 1.18
C1S-203ENST00000402681 SUPT5HO00267 1087 aaKnown RBP21.96■■□□□ 1.11
C1S-203ENST00000402681 MYO15BQ96JP2 1530 aa21.95■■□□□ 1.1
C1S-203ENST00000402681 ABCC9O60706 1549 aa21.83■■□□□ 1.09
C1S-203ENST00000402681 NACADO15069 1562 aa21.7■■□□□ 1.06
C1S-203ENST00000402681 SCRIBQ14160 1630 aa21.64■■□□□ 1.06
C1S-203ENST00000402681 RB1CC1Q8TDY2 1594 aa21.4■■□□□ 1.02
C1S-203ENST00000402681 RSF1Q96T23 1441 aaPredicted RBP21.28■■□□□ 1
C1S-203ENST00000402681 CHIC1Q5VXU3 224 aa21.23■□□□□ 0.99
C1S-203ENST00000402681 CECR2Q9BXF3 1484 aa21.12■□□□□ 0.97
C1S-203ENST00000402681 MROH2BQ7Z745 1585 aa21.02■□□□□ 0.96
C1S-203ENST00000402681 UNC13AQ9UPW8 1703 aa20.98■□□□□ 0.95
C1S-203ENST00000402681 BAZ1AQ9NRL2 1556 aaPredicted RBP20.9■□□□□ 0.94
C1S-203ENST00000402681 WIZO95785 1651 aa20.85■□□□□ 0.93
C1S-203ENST00000402681 BICRAQ9NZM4 1560 aa20.79■□□□□ 0.92
C1S-203ENST00000402681 PABPN1Q86U42 306 aaKnown RBP eCLIP20.75■□□□□ 0.91
C1S-203ENST00000402681 SMARCA4P51532 1647 aa20.74■□□□□ 0.91
C1S-203ENST00000402681 TOP2AP11388 1531 aaKnown RBP20.61■□□□□ 0.89
C1S-203ENST00000402681 TRIM41Q8WV44 630 aa20.58■□□□□ 0.89
C1S-203ENST00000402681 LOC105371045A0A1W2PR82 267 aa20.49■□□□□ 0.87
C1S-203ENST00000402681 CCDC88BA6NC98 1476 aa20.47■□□□□ 0.87
C1S-203ENST00000402681 PEG3Q9GZU2 1588 aa20.46■□□□□ 0.87
C1S-203ENST00000402681 SMARCA2P51531 1590 aa20.45■□□□□ 0.86
C1S-203ENST00000402681 EIF4G1Q04637 1599 aaKnown RBP20.44■□□□□ 0.86
C1S-203ENST00000402681 ATAD2BQ9ULI0 1458 aa20.34■□□□□ 0.85
C1S-203ENST00000402681 FAM9AQ8IZU1 332 aaPredicted RBP20.26■□□□□ 0.83
C1S-203ENST00000402681 BAZ1BQ9UIG0 1483 aaKnown RBP20.24■□□□□ 0.83
C1S-203ENST00000402681 ABCC8Q09428 1581 aa20.19■□□□□ 0.82
C1S-203ENST00000402681 NCAPD3P42695 1498 aa20.07■□□□□ 0.8
C1S-203ENST00000402681 HMGXB3Q12766 1538 aa20.04■□□□□ 0.8
C1S-203ENST00000402681 PCGF6Q9BYE7 350 aa20.02■□□□□ 0.79
C1S-203ENST00000402681 WRNQ14191 1432 aaPredicted RBP eCLIP20■□□□□ 0.79
C1S-203ENST00000402681 EHMT2Q96KQ7 1210 aa20■□□□□ 0.79
C1S-203ENST00000402681 SOGA1O94964 1423 aa19.94■□□□□ 0.78
C1S-203ENST00000402681 EEA1Q15075 1411 aa19.91■□□□□ 0.78
C1S-203ENST00000402681 SYNJ1O43426 1573 aa19.88■□□□□ 0.77
C1S-203ENST00000402681 TRIM26Q12899 539 aaPredicted RBP19.86■□□□□ 0.77
C1S-203ENST00000402681 CSRNP3Q8WYN3 585 aa19.84■□□□□ 0.77
C1S-203ENST00000402681 RUSC2Q8N2Y8 1516 aa19.84■□□□□ 0.77
C1S-203ENST00000402681 HRCP23327 699 aa19.77■□□□□ 0.76
C1S-203ENST00000402681 CFTRP13569 1480 aa19.76■□□□□ 0.75
C1S-203ENST00000402681 TOP2BQ02880 1626 aa19.73■□□□□ 0.75
C1S-203ENST00000402681 TNIKQ9UKE5 1360 aa19.73■□□□□ 0.75
C1S-203ENST00000402681 CC2D2AQ9P2K1 1620 aa19.72■□□□□ 0.75
C1S-203ENST00000402681 BIVM-ERCC5R4GMW8 1640 aa19.68■□□□□ 0.74
C1S-203ENST00000402681 GOLGA3Q08378 1498 aa19.67■□□□□ 0.74
C1S-203ENST00000402681 CEP162Q5TB80 1403 aa19.66■□□□□ 0.74
C1S-203ENST00000402681 UBTFP17480 764 aaKnown RBP19.64■□□□□ 0.74
C1S-203ENST00000402681 CEP164Q9UPV0 1460 aa19.62■□□□□ 0.73
C1S-203ENST00000402681 CADPSQ9ULU8 1353 aa19.62■□□□□ 0.73
C1S-203ENST00000402681 CUX1P39880 1505 aa19.61■□□□□ 0.73
C1S-203ENST00000402681 KIF21BO75037 1637 aa19.6■□□□□ 0.73
C1S-203ENST00000402681 PRDM2Q13029 1718 aa19.55■□□□□ 0.72
C1S-203ENST00000402681 PPARGC1BQ86YN6 1023 aaKnown RBP19.5■□□□□ 0.71
C1S-203ENST00000402681 RAPGEF2Q9Y4G8 1499 aa19.49■□□□□ 0.71
C1S-203ENST00000402681 KIF27Q86VH2 1401 aa19.45■□□□□ 0.7
C1S-203ENST00000402681 PRXQ9BXM0 1461 aa19.43■□□□□ 0.7
C1S-203ENST00000402681 CLIP1P30622 1438 aa19.4■□□□□ 0.7
C1S-203ENST00000402681 ERICH3Q5RHP9 1530 aa19.4■□□□□ 0.7
C1S-203ENST00000402681 FANCD2Q9BXW9 1451 aa19.39■□□□□ 0.69
C1S-203ENST00000402681 FGD5Q6ZNL6 1462 aa19.33■□□□□ 0.68
C1S-203ENST00000402681 NESP48681 1621 aa19.32■□□□□ 0.68
C1S-203ENST00000402681 CUX2O14529 1486 aa19.3■□□□□ 0.68
C1S-203ENST00000402681 VPS8Q8N3P4 1428 aa19.29■□□□□ 0.68
C1S-203ENST00000402681 LAMC3Q9Y6N6 1575 aa19.27■□□□□ 0.68
C1S-203ENST00000402681 IGF1RP08069 1367 aa19.27■□□□□ 0.67
C1S-203ENST00000402681 ZEB1P37275 1124 aaPredicted RBP19.26■□□□□ 0.67
C1S-203ENST00000402681 DNMBPQ6XZF7 1577 aa19.25■□□□□ 0.67
C1S-203ENST00000402681 TTBK1Q5TCY1 1321 aaPredicted RBP19.25■□□□□ 0.67
C1S-203ENST00000402681 RANGAP1P46060 587 aaPredicted RBP19.23■□□□□ 0.67
C1S-203ENST00000402681 DNAJC5BQ9UF47 199 aa19.23■□□□□ 0.67
C1S-203ENST00000402681 TOPBP1Q92547 1522 aa19.22■□□□□ 0.67
C1S-203ENST00000402681 POLA1P09884 1462 aaPredicted RBP19.17■□□□□ 0.66
C1S-203ENST00000402681 CARMIL1Q5VZK9 1371 aa19.16■□□□□ 0.66
C1S-203ENST00000402681 PDS5BQ9NTI5 1447 aa19.16■□□□□ 0.66
C1S-203ENST00000402681 ABCA10Q8WWZ4 1543 aa19.15■□□□□ 0.66
C1S-203ENST00000402681 RAD54L2Q9Y4B4 1467 aa19.15■□□□□ 0.66
C1S-203ENST00000402681 ARAP1Q96P48 1450 aa19.14■□□□□ 0.66
C1S-203ENST00000402681 APLP2Q06481 763 aa19.14■□□□□ 0.65
C1S-203ENST00000402681 URB2Q14146 1524 aaKnown RBP19.12■□□□□ 0.65
C1S-203ENST00000402681 ARHGAP35Q9NRY4 1499 aa19.07■□□□□ 0.64
C1S-203ENST00000402681 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.05■□□□□ 0.64
C1S-203ENST00000402681 KIF21AQ7Z4S6 1674 aa19.01■□□□□ 0.63
C1S-203ENST00000402681 CCER1Q8TC90 406 aaPredicted RBP19.01■□□□□ 0.63
C1S-203ENST00000402681 WDR97A6NE52 1622 aa18.99■□□□□ 0.63
C1S-203ENST00000402681 CUL7Q14999 1698 aa18.96■□□□□ 0.63
C1S-203ENST00000402681 TDRD9Q8NDG6 1382 aaKnown RBP18.94■□□□□ 0.62
C1S-203ENST00000402681 KANK4Q5T7N3 995 aaPredicted RBP18.93■□□□□ 0.62
C1S-203ENST00000402681 ABCA5Q8WWZ7 1642 aa18.93■□□□□ 0.62
C1S-203ENST00000402681 GAPVD1Q14C86 1478 aa18.91■□□□□ 0.62
C1S-203ENST00000402681 HNRNPUL2Q1KMD3 747 aaKnown RBP18.89■□□□□ 0.61
C1S-203ENST00000402681 TARBP1Q13395 1621 aaKnown RBP18.87■□□□□ 0.61
C1S-203ENST00000402681 MRC2Q9UBG0 1479 aa18.87■□□□□ 0.61
C1S-203ENST00000402681 FHAD1B1AJZ9 1412 aa18.84■□□□□ 0.61
C1S-203ENST00000402681 MAP3K1Q13233 1512 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms