RNA–Protein interactions for RNA: ENST00000534230.5

SC5D-208, Transcript of sterol-C5-desaturase, humanhuman

TSL 5 BASIC

Gene SC5D, Length 1,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SC5D-208ENST00000534230 NISCHQ9Y2I1 1504 aa29.64■■■□□ 2.34
SC5D-208ENST00000534230 CCDC180Q9P1Z9 1646 aa26.3■■□□□ 1.8
SC5D-208ENST00000534230 ABCC9O60706 1549 aa25.83■■□□□ 1.73
SC5D-208ENST00000534230 DCAF8L2P0C7V8 631 aa24.87■■□□□ 1.57
SC5D-208ENST00000534230 RB1CC1Q8TDY2 1594 aa24.77■■□□□ 1.56
SC5D-208ENST00000534230 NACADO15069 1562 aa24.73■■□□□ 1.55
SC5D-208ENST00000534230 ZCCHC6Q5VYS8 1495 aaKnown RBP24.69■■□□□ 1.54
SC5D-208ENST00000534230 MYO15BQ96JP2 1530 aa24.54■■□□□ 1.52
SC5D-208ENST00000534230 DCAF1Q9Y4B6 1507 aa24.46■■□□□ 1.51
SC5D-208ENST00000534230 UNC13AQ9UPW8 1703 aa24.28■■□□□ 1.48
SC5D-208ENST00000534230 PABPN1Q86U42 306 aaKnown RBP eCLIP24.17■■□□□ 1.46
SC5D-208ENST00000534230 SCRIBQ14160 1630 aa24.09■■□□□ 1.45
SC5D-208ENST00000534230 BICRAQ9NZM4 1560 aa24.07■■□□□ 1.44
SC5D-208ENST00000534230 DNAJC5BQ9UF47 199 aa23.73■■□□□ 1.39
SC5D-208ENST00000534230 SHROOM4Q9ULL8 1493 aa23.68■■□□□ 1.38
SC5D-208ENST00000534230 EIF4G1Q04637 1599 aaKnown RBP23.42■■□□□ 1.34
SC5D-208ENST00000534230 CC2D2AQ9P2K1 1620 aa23.34■■□□□ 1.33
SC5D-208ENST00000534230 CECR2Q9BXF3 1484 aa23.17■■□□□ 1.3
SC5D-208ENST00000534230 SMARCA4P51532 1647 aa23.01■■□□□ 1.27
SC5D-208ENST00000534230 BAZ1AQ9NRL2 1556 aaPredicted RBP22.95■■□□□ 1.27
SC5D-208ENST00000534230 MROH2BQ7Z745 1585 aa22.89■■□□□ 1.25
SC5D-208ENST00000534230 ATAD2BQ9ULI0 1458 aa22.88■■□□□ 1.25
SC5D-208ENST00000534230 NCAPD3P42695 1498 aa22.83■■□□□ 1.25
SC5D-208ENST00000534230 SMARCA2P51531 1590 aa22.81■■□□□ 1.24
SC5D-208ENST00000534230 PEG3Q9GZU2 1588 aa22.73■■□□□ 1.23
SC5D-208ENST00000534230 HMGXB3Q12766 1538 aa22.71■■□□□ 1.23
SC5D-208ENST00000534230 BAZ1BQ9UIG0 1483 aaKnown RBP22.68■■□□□ 1.22
SC5D-208ENST00000534230 WIZO95785 1651 aa22.66■■□□□ 1.22
SC5D-208ENST00000534230 RSF1Q96T23 1441 aaPredicted RBP22.6■■□□□ 1.21
SC5D-208ENST00000534230 NESP48681 1621 aa22.37■■□□□ 1.17
SC5D-208ENST00000534230 TOP2AP11388 1531 aaKnown RBP22.35■■□□□ 1.17
SC5D-208ENST00000534230 ERCC6Q03468 1493 aa22.23■■□□□ 1.15
SC5D-208ENST00000534230 LAMC3Q9Y6N6 1575 aa22.23■■□□□ 1.15
SC5D-208ENST00000534230 CADPSQ9ULU8 1353 aa22.18■■□□□ 1.14
SC5D-208ENST00000534230 CCDC88BA6NC98 1476 aa22.12■■□□□ 1.13
SC5D-208ENST00000534230 SUPT5HO00267 1087 aaKnown RBP22.11■■□□□ 1.13
SC5D-208ENST00000534230 KIF21AQ7Z4S6 1674 aa22.09■■□□□ 1.13
SC5D-208ENST00000534230 PDS5BQ9NTI5 1447 aa22.07■■□□□ 1.12
SC5D-208ENST00000534230 CFTRP13569 1480 aa22.05■■□□□ 1.12
SC5D-208ENST00000534230 THOC2Q8NI27 1593 aaKnown RBP21.98■■□□□ 1.11
SC5D-208ENST00000534230 FANCD2Q9BXW9 1451 aa21.95■■□□□ 1.1
SC5D-208ENST00000534230 CUX2O14529 1486 aa21.93■■□□□ 1.1
SC5D-208ENST00000534230 CEP164Q9UPV0 1460 aa21.91■■□□□ 1.1
SC5D-208ENST00000534230 PRDM2Q13029 1718 aa21.88■■□□□ 1.09
SC5D-208ENST00000534230 MRC2Q9UBG0 1479 aa21.87■■□□□ 1.09
SC5D-208ENST00000534230 WDR62O43379 1518 aa21.79■■□□□ 1.08
SC5D-208ENST00000534230 URB2Q14146 1524 aaKnown RBP21.74■■□□□ 1.07
SC5D-208ENST00000534230 TOPBP1Q92547 1522 aa21.6■■□□□ 1.05
SC5D-208ENST00000534230 DNMBPQ6XZF7 1577 aa21.56■■□□□ 1.04
SC5D-208ENST00000534230 ABCC8Q09428 1581 aa21.53■■□□□ 1.04
SC5D-208ENST00000534230 CUX1P39880 1505 aa21.46■■□□□ 1.03
SC5D-208ENST00000534230 IFT140Q96RY7 1462 aa21.43■■□□□ 1.02
SC5D-208ENST00000534230 POLA1P09884 1462 aaPredicted RBP21.42■■□□□ 1.02
SC5D-208ENST00000534230 ZNF608Q9ULD9 1512 aaPredicted RBP21.41■■□□□ 1.02
SC5D-208ENST00000534230 FGD5Q6ZNL6 1462 aa21.38■■□□□ 1.01
SC5D-208ENST00000534230 RAD54L2Q9Y4B4 1467 aa21.37■■□□□ 1.01
SC5D-208ENST00000534230 TARBP1Q13395 1621 aaKnown RBP21.36■■□□□ 1.01
SC5D-208ENST00000534230 SOGA1O94964 1423 aa21.33■■□□□ 1.01
SC5D-208ENST00000534230 WRNQ14191 1432 aaPredicted RBP eCLIP21.31■■□□□ 1
SC5D-208ENST00000534230 DNAJC5Q9H3Z4 198 aa21.3■■□□□ 1
SC5D-208ENST00000534230 EIF4G3O43432 1585 aaKnown RBP21.29■■□□□ 1
SC5D-208ENST00000534230 SYNJ1O43426 1573 aa21.29■■□□□ 1
SC5D-208ENST00000534230 AQRO60306 1485 aaKnown RBP eCLIP21.28■■□□□ 1
SC5D-208ENST00000534230 TOP2BQ02880 1626 aa21.25■□□□□ 0.99
SC5D-208ENST00000534230 BIVM-ERCC5R4GMW8 1640 aa21.25■□□□□ 0.99
SC5D-208ENST00000534230 TDRD9Q8NDG6 1382 aaKnown RBP21.24■□□□□ 0.99
SC5D-208ENST00000534230 WDR97A6NE52 1622 aa21.19■□□□□ 0.98
SC5D-208ENST00000534230 ABCA10Q8WWZ4 1543 aa21.14■□□□□ 0.97
SC5D-208ENST00000534230 GAPVD1Q14C86 1478 aa21.08■□□□□ 0.96
SC5D-208ENST00000534230 OSCARQ8IYS5 282 aa21.07■□□□□ 0.96
SC5D-208ENST00000534230 ABCA5Q8WWZ7 1642 aa21.07■□□□□ 0.96
SC5D-208ENST00000534230 SNAPC4Q5SXM2 1469 aa21.07■□□□□ 0.96
SC5D-208ENST00000534230 GRIN2BQ13224 1484 aa21.06■□□□□ 0.96
SC5D-208ENST00000534230 PBRM1Q86U86 1689 aa21.05■□□□□ 0.96
SC5D-208ENST00000534230 FBLN2P98095 1184 aa21.05■□□□□ 0.96
SC5D-208ENST00000534230 CHD1O14646 1710 aa21.04■□□□□ 0.96
SC5D-208ENST00000534230 MAGI1Q96QZ7 1491 aaPredicted RBP20.98■□□□□ 0.95
SC5D-208ENST00000534230 CHMP7Q8WUX9 453 aaPredicted RBP20.94■□□□□ 0.94
SC5D-208ENST00000534230 SYNJ2O15056 1496 aa20.92■□□□□ 0.94
SC5D-208ENST00000534230 ERICH3Q5RHP9 1530 aa20.87■□□□□ 0.93
SC5D-208ENST00000534230 ADAMTS12P58397 1594 aa20.87■□□□□ 0.93
SC5D-208ENST00000534230 KIF27Q86VH2 1401 aa20.84■□□□□ 0.93
SC5D-208ENST00000534230 TRIM41Q8WV44 630 aa20.84■□□□□ 0.93
SC5D-208ENST00000534230 FHAD1B1AJZ9 1412 aa20.81■□□□□ 0.92
SC5D-208ENST00000534230 GRIN2AQ12879 1464 aa20.8■□□□□ 0.92
SC5D-208ENST00000534230 IGF1RP08069 1367 aa20.78■□□□□ 0.92
SC5D-208ENST00000534230 CLASP1Q7Z460 1538 aa20.77■□□□□ 0.92
SC5D-208ENST00000534230 RIMBP3CA6NJZ7 1639 aa20.76■□□□□ 0.91
SC5D-208ENST00000534230 RIMBP3BA6NNM3 1639 aa20.76■□□□□ 0.91
SC5D-208ENST00000534230 RIMBP3Q9UFD9 1639 aa20.76■□□□□ 0.91
SC5D-208ENST00000534230 ARHGEF11O15085 1522 aa20.75■□□□□ 0.91
SC5D-208ENST00000534230 RUSC2Q8N2Y8 1516 aa20.75■□□□□ 0.91
SC5D-208ENST00000534230 CEP170Q5SW79 1584 aa20.73■□□□□ 0.91
SC5D-208ENST00000534230 NUP160Q12769 1436 aa20.69■□□□□ 0.9
SC5D-208ENST00000534230 CUL7Q14999 1698 aa20.69■□□□□ 0.9
SC5D-208ENST00000534230 CARMIL1Q5VZK9 1371 aa20.65■□□□□ 0.9
SC5D-208ENST00000534230 CHIC1Q5VXU3 224 aa20.6■□□□□ 0.89
SC5D-208ENST00000534230 CYB5RLQ6IPT4 315 aa20.59■□□□□ 0.89
SC5D-208ENST00000534230 ARAP1Q96P48 1450 aa20.58■□□□□ 0.89
SC5D-208ENST00000534230 ERCC6L2Q5T890 1561 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 169.6 ms