RNA–Protein interactions for RNA: ENST00000340849.8

RHCE-202, Transcript of Rh blood group CcEe antigens, humanhuman

TSL 1 (best) BASIC

Gene RHCE, Length 1,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHCE-202ENST00000340849 NISCHQ9Y2I1 1504 aa36.13■■■■□ 3.37
RHCE-202ENST00000340849 AEBP2Q6ZN18 517 aaPredicted RBP32.96■■■□□ 2.87
RHCE-202ENST00000340849 ABCC9O60706 1549 aa32.48■■■□□ 2.79
RHCE-202ENST00000340849 CCDC180Q9P1Z9 1646 aa32.45■■■□□ 2.79
RHCE-202ENST00000340849 CHIC1Q5VXU3 224 aa30.98■■■□□ 2.55
RHCE-202ENST00000340849 RB1CC1Q8TDY2 1594 aa30.96■■■□□ 2.55
RHCE-202ENST00000340849 NACADO15069 1562 aa30.74■■■□□ 2.51
RHCE-202ENST00000340849 DCAF8L2P0C7V8 631 aa30.69■■■□□ 2.5
RHCE-202ENST00000340849 DNAJC5BQ9UF47 199 aa30.47■■■□□ 2.47
RHCE-202ENST00000340849 MYO15BQ96JP2 1530 aa30.27■■■□□ 2.44
RHCE-202ENST00000340849 PABPN1Q86U42 306 aaKnown RBP eCLIP30.27■■■□□ 2.44
RHCE-202ENST00000340849 UNC13AQ9UPW8 1703 aa30.16■■■□□ 2.42
RHCE-202ENST00000340849 BICRAQ9NZM4 1560 aa29.93■■■□□ 2.38
RHCE-202ENST00000340849 ZCCHC6Q5VYS8 1495 aaKnown RBP29.88■■■□□ 2.37
RHCE-202ENST00000340849 DCAF1Q9Y4B6 1507 aa29.86■■■□□ 2.37
RHCE-202ENST00000340849 SHROOM4Q9ULL8 1493 aa29.64■■■□□ 2.34
RHCE-202ENST00000340849 SCRIBQ14160 1630 aa29.53■■■□□ 2.32
RHCE-202ENST00000340849 CC2D2AQ9P2K1 1620 aa29.34■■■□□ 2.29
RHCE-202ENST00000340849 CECR2Q9BXF3 1484 aa29.29■■■□□ 2.28
RHCE-202ENST00000340849 EIF4G1Q04637 1599 aaKnown RBP29.26■■■□□ 2.27
RHCE-202ENST00000340849 NCAPD3P42695 1498 aa28.35■■■□□ 2.13
RHCE-202ENST00000340849 ATAD2BQ9ULI0 1458 aa28.22■■■□□ 2.11
RHCE-202ENST00000340849 SMARCA2P51531 1590 aa28.2■■■□□ 2.11
RHCE-202ENST00000340849 SMARCA4P51532 1647 aa28.18■■■□□ 2.1
RHCE-202ENST00000340849 SENP3Q9H4L4 574 aaPredicted RBP28.15■■■□□ 2.1
RHCE-202ENST00000340849 DNAJC5Q9H3Z4 198 aa28.14■■■□□ 2.1
RHCE-202ENST00000340849 ERCC6Q03468 1493 aa28.13■■■□□ 2.09
RHCE-202ENST00000340849 HMGXB3Q12766 1538 aa28.11■■■□□ 2.09
RHCE-202ENST00000340849 BAZ1AQ9NRL2 1556 aaPredicted RBP28.08■■■□□ 2.09
RHCE-202ENST00000340849 CUX2O14529 1486 aa28.07■■■□□ 2.08
RHCE-202ENST00000340849 BAZ1BQ9UIG0 1483 aaKnown RBP27.99■■■□□ 2.07
RHCE-202ENST00000340849 PEG3Q9GZU2 1588 aa27.9■■■□□ 2.06
RHCE-202ENST00000340849 NESP48681 1621 aa27.85■■■□□ 2.05
RHCE-202ENST00000340849 MROH2BQ7Z745 1585 aa27.79■■■□□ 2.04
RHCE-202ENST00000340849 PHF23Q9BUL5 403 aaPredicted RBP27.74■■■□□ 2.03
RHCE-202ENST00000340849 LAMC3Q9Y6N6 1575 aa27.73■■■□□ 2.03
RHCE-202ENST00000340849 PDS5BQ9NTI5 1447 aa27.63■■■□□ 2.01
RHCE-202ENST00000340849 THOC2Q8NI27 1593 aaKnown RBP27.56■■■□□ 2
RHCE-202ENST00000340849 CADPSQ9ULU8 1353 aa27.51■■□□□ 1.99
RHCE-202ENST00000340849 KIF21AQ7Z4S6 1674 aa27.51■■□□□ 1.99
RHCE-202ENST00000340849 WIZO95785 1651 aa27.47■■□□□ 1.99
RHCE-202ENST00000340849 MRC2Q9UBG0 1479 aa27.32■■□□□ 1.96
RHCE-202ENST00000340849 RSF1Q96T23 1441 aaPredicted RBP27.24■■□□□ 1.95
RHCE-202ENST00000340849 CEP164Q9UPV0 1460 aa27.22■■□□□ 1.95
RHCE-202ENST00000340849 WDR62O43379 1518 aa27.21■■□□□ 1.95
RHCE-202ENST00000340849 FANCD2Q9BXW9 1451 aa27.17■■□□□ 1.94
RHCE-202ENST00000340849 CFTRP13569 1480 aa27.15■■□□□ 1.94
RHCE-202ENST00000340849 TOP2AP11388 1531 aaKnown RBP27.14■■□□□ 1.94
RHCE-202ENST00000340849 TRIM41Q8WV44 630 aa26.9■■□□□ 1.9
RHCE-202ENST00000340849 OSCARQ8IYS5 282 aa26.89■■□□□ 1.9
RHCE-202ENST00000340849 URB2Q14146 1524 aaKnown RBP26.89■■□□□ 1.89
RHCE-202ENST00000340849 PRDM2Q13029 1718 aa26.88■■□□□ 1.89
RHCE-202ENST00000340849 CCDC88BA6NC98 1476 aa26.85■■□□□ 1.89
RHCE-202ENST00000340849 ABCC8Q09428 1581 aa26.7■■□□□ 1.86
RHCE-202ENST00000340849 IFT140Q96RY7 1462 aa26.69■■□□□ 1.86
RHCE-202ENST00000340849 TOPBP1Q92547 1522 aa26.63■■□□□ 1.85
RHCE-202ENST00000340849 ZNF608Q9ULD9 1512 aaPredicted RBP26.56■■□□□ 1.84
RHCE-202ENST00000340849 DNMBPQ6XZF7 1577 aa26.54■■□□□ 1.84
RHCE-202ENST00000340849 EIF4G3O43432 1585 aaKnown RBP26.42■■□□□ 1.82
RHCE-202ENST00000340849 RIMBP3CA6NJZ7 1639 aa26.38■■□□□ 1.81
RHCE-202ENST00000340849 RIMBP3BA6NNM3 1639 aa26.38■■□□□ 1.81
RHCE-202ENST00000340849 RIMBP3Q9UFD9 1639 aa26.38■■□□□ 1.81
RHCE-202ENST00000340849 AQRO60306 1485 aaKnown RBP eCLIP26.36■■□□□ 1.813e-7■■■□□ 17
RHCE-202ENST00000340849 TARBP1Q13395 1621 aaKnown RBP26.36■■□□□ 1.81
RHCE-202ENST00000340849 POLA1P09884 1462 aaPredicted RBP26.34■■□□□ 1.81
RHCE-202ENST00000340849 FBLN2P98095 1184 aa26.33■■□□□ 1.81
RHCE-202ENST00000340849 SOGA1O94964 1423 aa26.31■■□□□ 1.8
RHCE-202ENST00000340849 ARHGEF11O15085 1522 aa26.29■■□□□ 1.8
RHCE-202ENST00000340849 FOXD1Q16676 465 aa26.29■■□□□ 1.8
RHCE-202ENST00000340849 CHD1O14646 1710 aa26.26■■□□□ 1.79
RHCE-202ENST00000340849 RAD54L2Q9Y4B4 1467 aa26.24■■□□□ 1.79
RHCE-202ENST00000340849 TDRD9Q8NDG6 1382 aaKnown RBP26.22■■□□□ 1.79
RHCE-202ENST00000340849 CYB5RLQ6IPT4 315 aa26.22■■□□□ 1.79
RHCE-202ENST00000340849 FGD5Q6ZNL6 1462 aa26.18■■□□□ 1.78
RHCE-202ENST00000340849 WDR97A6NE52 1622 aa26.18■■□□□ 1.78
RHCE-202ENST00000340849 CHMP7Q8WUX9 453 aaPredicted RBP26.14■■□□□ 1.78
RHCE-202ENST00000340849 CUX1P39880 1505 aa26.11■■□□□ 1.77
RHCE-202ENST00000340849 SUPT5HO00267 1087 aaKnown RBP26.11■■□□□ 1.77
RHCE-202ENST00000340849 SNAPC4Q5SXM2 1469 aa26.08■■□□□ 1.77
RHCE-202ENST00000340849 GRIN2BQ13224 1484 aa26.06■■□□□ 1.76
RHCE-202ENST00000340849 MAGI1Q96QZ7 1491 aaPredicted RBP26.06■■□□□ 1.76
RHCE-202ENST00000340849 SYNJ1O43426 1573 aa26.01■■□□□ 1.75
RHCE-202ENST00000340849 TRHP20396 242 aaPredicted RBP26■■□□□ 1.75
RHCE-202ENST00000340849 ARAP1Q96P48 1450 aa25.99■■□□□ 1.75
RHCE-202ENST00000340849 SYNJ2O15056 1496 aa25.98■■□□□ 1.75
RHCE-202ENST00000340849 GAPVD1Q14C86 1478 aa25.97■■□□□ 1.75
RHCE-202ENST00000340849 CLASP1Q7Z460 1538 aa25.92■■□□□ 1.74
RHCE-202ENST00000340849 PBRM1Q86U86 1689 aa25.9■■□□□ 1.74
RHCE-202ENST00000340849 ABCA10Q8WWZ4 1543 aa25.89■■□□□ 1.74
RHCE-202ENST00000340849 WRNQ14191 1432 aaPredicted RBP eCLIP25.85■■□□□ 1.73
RHCE-202ENST00000340849 ABCA5Q8WWZ7 1642 aa25.81■■□□□ 1.72
RHCE-202ENST00000340849 TOP2BQ02880 1626 aa25.73■■□□□ 1.71
RHCE-202ENST00000340849 BIVM-ERCC5R4GMW8 1640 aa25.72■■□□□ 1.71
RHCE-202ENST00000340849 GRIN2AQ12879 1464 aa25.69■■□□□ 1.7
RHCE-202ENST00000340849 FHAD1B1AJZ9 1412 aa25.64■■□□□ 1.7
RHCE-202ENST00000340849 ADAMTS12P58397 1594 aa25.62■■□□□ 1.69
RHCE-202ENST00000340849 ERICH3Q5RHP9 1530 aa25.6■■□□□ 1.69
RHCE-202ENST00000340849 NUP160Q12769 1436 aa25.59■■□□□ 1.69
RHCE-202ENST00000340849 CEP170Q5SW79 1584 aa25.55■■□□□ 1.68
RHCE-202ENST00000340849 ERCC6L2Q5T890 1561 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 134.2 ms