RNA–Protein interactions for RNA: ENST00000392789.2

SC5D-202, Transcript of sterol-C5-desaturase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SC5D, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SC5D-202ENST00000392789 NISCHQ9Y2I1 1504 aa30.93■■■□□ 2.54
SC5D-202ENST00000392789 CCDC180Q9P1Z9 1646 aa26.53■■□□□ 1.84
SC5D-202ENST00000392789 ZCCHC6Q5VYS8 1495 aaKnown RBP26.17■■□□□ 1.78
SC5D-202ENST00000392789 SHROOM4Q9ULL8 1493 aa26■■□□□ 1.75
SC5D-202ENST00000392789 DCAF1Q9Y4B6 1507 aa25.51■■□□□ 1.67
SC5D-202ENST00000392789 SUPT5HO00267 1087 aaKnown RBP25.43■■□□□ 1.66
SC5D-202ENST00000392789 DCAF8L2P0C7V8 631 aa25.41■■□□□ 1.66
SC5D-202ENST00000392789 MYO15BQ96JP2 1530 aa24.86■■□□□ 1.57
SC5D-202ENST00000392789 CHIC1Q5VXU3 224 aa24.73■■□□□ 1.55
SC5D-202ENST00000392789 ABCC9O60706 1549 aa24.68■■□□□ 1.54
SC5D-202ENST00000392789 SCRIBQ14160 1630 aa24.64■■□□□ 1.53
SC5D-202ENST00000392789 NACADO15069 1562 aa24.51■■□□□ 1.51
SC5D-202ENST00000392789 RSF1Q96T23 1441 aaPredicted RBP24.36■■□□□ 1.49
SC5D-202ENST00000392789 RB1CC1Q8TDY2 1594 aa24.15■■□□□ 1.46
SC5D-202ENST00000392789 CECR2Q9BXF3 1484 aa24.02■■□□□ 1.44
SC5D-202ENST00000392789 MROH2BQ7Z745 1585 aa23.98■■□□□ 1.43
SC5D-202ENST00000392789 LOC105371045A0A1W2PR82 267 aa23.87■■□□□ 1.41
SC5D-202ENST00000392789 WIZO95785 1651 aa23.85■■□□□ 1.41
SC5D-202ENST00000392789 BAZ1AQ9NRL2 1556 aaPredicted RBP23.82■■□□□ 1.4
SC5D-202ENST00000392789 TRIM41Q8WV44 630 aa23.79■■□□□ 1.4
SC5D-202ENST00000392789 UNC13AQ9UPW8 1703 aa23.73■■□□□ 1.39
SC5D-202ENST00000392789 PCGF6Q9BYE7 350 aa23.72■■□□□ 1.39
SC5D-202ENST00000392789 HRCP23327 699 aa23.71■■□□□ 1.39
SC5D-202ENST00000392789 SMARCA4P51532 1647 aa23.62■■□□□ 1.37
SC5D-202ENST00000392789 TOP2AP11388 1531 aaKnown RBP23.56■■□□□ 1.36
SC5D-202ENST00000392789 EIF4G1Q04637 1599 aaKnown RBP23.55■■□□□ 1.36
SC5D-202ENST00000392789 FAM9AQ8IZU1 332 aaPredicted RBP23.46■■□□□ 1.35
SC5D-202ENST00000392789 TRIM26Q12899 539 aaPredicted RBP23.44■■□□□ 1.34
SC5D-202ENST00000392789 BICRAQ9NZM4 1560 aa23.41■■□□□ 1.34
SC5D-202ENST00000392789 SMARCA2P51531 1590 aa23.4■■□□□ 1.34
SC5D-202ENST00000392789 CCDC88BA6NC98 1476 aa23.37■■□□□ 1.33
SC5D-202ENST00000392789 PABPN1Q86U42 306 aaKnown RBP eCLIP23.25■■□□□ 1.31
SC5D-202ENST00000392789 PEG3Q9GZU2 1588 aa23.24■■□□□ 1.31
SC5D-202ENST00000392789 ABCC8Q09428 1581 aa23.22■■□□□ 1.31
SC5D-202ENST00000392789 EHMT2Q96KQ7 1210 aa23.16■■□□□ 1.3
SC5D-202ENST00000392789 PPARGC1BQ86YN6 1023 aaKnown RBP23.08■■□□□ 1.29
SC5D-202ENST00000392789 ATAD2BQ9ULI0 1458 aa23■■□□□ 1.27
SC5D-202ENST00000392789 EEA1Q15075 1411 aa22.99■■□□□ 1.27
SC5D-202ENST00000392789 BAZ1BQ9UIG0 1483 aaKnown RBP22.95■■□□□ 1.26
SC5D-202ENST00000392789 SOGA1O94964 1423 aa22.94■■□□□ 1.26
SC5D-202ENST00000392789 ZEB1P37275 1124 aaPredicted RBP22.93■■□□□ 1.26
SC5D-202ENST00000392789 WRNQ14191 1432 aaPredicted RBP eCLIP22.91■■□□□ 1.26
SC5D-202ENST00000392789 TNIKQ9UKE5 1360 aa22.83■■□□□ 1.25
SC5D-202ENST00000392789 CSRNP3Q8WYN3 585 aa22.83■■□□□ 1.24
SC5D-202ENST00000392789 CEP162Q5TB80 1403 aa22.82■■□□□ 1.24
SC5D-202ENST00000392789 RUSC2Q8N2Y8 1516 aa22.81■■□□□ 1.24
SC5D-202ENST00000392789 SYNJ1O43426 1573 aa22.8■■□□□ 1.24
SC5D-202ENST00000392789 GOLGA3Q08378 1498 aa22.76■■□□□ 1.23
SC5D-202ENST00000392789 KIF21BO75037 1637 aa22.68■■□□□ 1.22
SC5D-202ENST00000392789 HMGXB3Q12766 1538 aa22.67■■□□□ 1.22
SC5D-202ENST00000392789 UBTFP17480 764 aaKnown RBP22.66■■□□□ 1.22
SC5D-202ENST00000392789 CEP164Q9UPV0 1460 aa22.66■■□□□ 1.22
SC5D-202ENST00000392789 NCAPD3P42695 1498 aa22.62■■□□□ 1.21
SC5D-202ENST00000392789 TOP2BQ02880 1626 aa22.61■■□□□ 1.21
SC5D-202ENST00000392789 BIVM-ERCC5R4GMW8 1640 aa22.56■■□□□ 1.2
SC5D-202ENST00000392789 CLIP1P30622 1438 aa22.44■■□□□ 1.18
SC5D-202ENST00000392789 RAPGEF2Q9Y4G8 1499 aa22.43■■□□□ 1.18
SC5D-202ENST00000392789 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.41■■□□□ 1.18
SC5D-202ENST00000392789 TTBK1Q5TCY1 1321 aaPredicted RBP22.41■■□□□ 1.18
SC5D-202ENST00000392789 CCER1Q8TC90 406 aaPredicted RBP22.41■■□□□ 1.18
SC5D-202ENST00000392789 CFTRP13569 1480 aa22.39■■□□□ 1.17
SC5D-202ENST00000392789 CUX1P39880 1505 aa22.36■■□□□ 1.17
SC5D-202ENST00000392789 VPS8Q8N3P4 1428 aa22.35■■□□□ 1.17
SC5D-202ENST00000392789 ERICH3Q5RHP9 1530 aa22.35■■□□□ 1.17
SC5D-202ENST00000392789 PRDM2Q13029 1718 aa22.33■■□□□ 1.16
SC5D-202ENST00000392789 PRXQ9BXM0 1461 aa22.3■■□□□ 1.16
SC5D-202ENST00000392789 KIF27Q86VH2 1401 aa22.24■■□□□ 1.15
SC5D-202ENST00000392789 APLP2Q06481 763 aa22.19■■□□□ 1.14
SC5D-202ENST00000392789 CADPSQ9ULU8 1353 aa22.13■■□□□ 1.13
SC5D-202ENST00000392789 RANGAP1P46060 587 aaPredicted RBP22.11■■□□□ 1.13
SC5D-202ENST00000392789 ARAP1Q96P48 1450 aa22.11■■□□□ 1.13
SC5D-202ENST00000392789 CC2D2AQ9P2K1 1620 aa22.1■■□□□ 1.13
SC5D-202ENST00000392789 CUX2O14529 1486 aa22.01■■□□□ 1.11
SC5D-202ENST00000392789 HNRNPUL2Q1KMD3 747 aaKnown RBP22.01■■□□□ 1.11
SC5D-202ENST00000392789 FGD5Q6ZNL6 1462 aa21.98■■□□□ 1.11
SC5D-202ENST00000392789 IGF1RP08069 1367 aa21.95■■□□□ 1.1
SC5D-202ENST00000392789 ARHGAP35Q9NRY4 1499 aa21.94■■□□□ 1.1
SC5D-202ENST00000392789 FANCD2Q9BXW9 1451 aa21.92■■□□□ 1.1
SC5D-202ENST00000392789 DIEXFQ68CQ4 756 aaKnown RBP21.87■■□□□ 1.09
SC5D-202ENST00000392789 CARMIL1Q5VZK9 1371 aa21.87■■□□□ 1.09
SC5D-202ENST00000392789 DNMBPQ6XZF7 1577 aa21.86■■□□□ 1.09
SC5D-202ENST00000392789 KANK4Q5T7N3 995 aaPredicted RBP21.85■■□□□ 1.09
SC5D-202ENST00000392789 PELP1Q8IZL8 1130 aaKnown RBP21.83■■□□□ 1.09
SC5D-202ENST00000392789 RRBP1Q9P2E9 1410 aaKnown RBP21.82■■□□□ 1.08
SC5D-202ENST00000392789 ZNF316A6NFI3 1004 aaPredicted RBP21.8■■□□□ 1.08
SC5D-202ENST00000392789 TOPBP1Q92547 1522 aa21.77■■□□□ 1.08
SC5D-202ENST00000392789 ABCA10Q8WWZ4 1543 aa21.77■■□□□ 1.08
SC5D-202ENST00000392789 MAP3K1Q13233 1512 aa21.76■■□□□ 1.07
SC5D-202ENST00000392789 POLA1P09884 1462 aaPredicted RBP21.75■■□□□ 1.07
SC5D-202ENST00000392789 CLSPNQ9HAW4 1339 aa21.73■■□□□ 1.07
SC5D-202ENST00000392789 TIAM1Q13009 1591 aa21.73■■□□□ 1.07
SC5D-202ENST00000392789 NESP48681 1621 aa21.73■■□□□ 1.07
SC5D-202ENST00000392789 LAMC3Q9Y6N6 1575 aa21.73■■□□□ 1.07
SC5D-202ENST00000392789 RAD54L2Q9Y4B4 1467 aa21.71■■□□□ 1.07
SC5D-202ENST00000392789 CCNB3Q8WWL7 1395 aa21.7■■□□□ 1.06
SC5D-202ENST00000392789 CUL7Q14999 1698 aa21.7■■□□□ 1.06
SC5D-202ENST00000392789 DHX57Q6P158 1386 aaKnown RBP21.68■■□□□ 1.06
SC5D-202ENST00000392789 FHAD1B1AJZ9 1412 aa21.68■■□□□ 1.06
SC5D-202ENST00000392789 SCAF1Q9H7N4 1312 aaKnown RBP21.67■■□□□ 1.06
SC5D-202ENST00000392789 WDR97A6NE52 1622 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms