RNA–Protein interactions for RNA: ENST00000506802.5

TUSC3-204, Transcript of tumor suppressor candidate 3, humanhuman

TSL 5 BASIC

Gene TUSC3, Length 1,546 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-204ENST00000506802 NISCHQ9Y2I1 1504 aa41.42■■■■■ 4.22
TUSC3-204ENST00000506802 CCDC180Q9P1Z9 1646 aa36.89■■■■□ 3.5
TUSC3-204ENST00000506802 ABCC9O60706 1549 aa36.4■■■■□ 3.42
TUSC3-204ENST00000506802 RB1CC1Q8TDY2 1594 aa34.85■■■■□ 3.17
TUSC3-204ENST00000506802 NACADO15069 1562 aa34.74■■■■□ 3.15
TUSC3-204ENST00000506802 DCAF8L2P0C7V8 631 aa34.71■■■■□ 3.15
TUSC3-204ENST00000506802 ZCCHC6Q5VYS8 1495 aaKnown RBP34.47■■■■□ 3.11
TUSC3-204ENST00000506802 MYO15BQ96JP2 1530 aa34.44■■■■□ 3.1
TUSC3-204ENST00000506802 DCAF1Q9Y4B6 1507 aa34.22■■■■□ 3.07
TUSC3-204ENST00000506802 UNC13AQ9UPW8 1703 aa34.11■■■■□ 3.05
TUSC3-204ENST00000506802 PABPN1Q86U42 306 aaKnown RBP eCLIP33.99■■■■□ 3.03
TUSC3-204ENST00000506802 BICRAQ9NZM4 1560 aa33.85■■■■□ 3.01
TUSC3-204ENST00000506802 SCRIBQ14160 1630 aa33.72■■■□□ 2.99
TUSC3-204ENST00000506802 DNAJC5BQ9UF47 199 aa33.64■■■□□ 2.98
TUSC3-204ENST00000506802 SHROOM4Q9ULL8 1493 aa33.39■■■□□ 2.94
TUSC3-204ENST00000506802 EIF4G1Q04637 1599 aaKnown RBP32.97■■■□□ 2.87
TUSC3-204ENST00000506802 CC2D2AQ9P2K1 1620 aa32.9■■■□□ 2.86
TUSC3-204ENST00000506802 CECR2Q9BXF3 1484 aa32.71■■■□□ 2.83
TUSC3-204ENST00000506802 SMARCA4P51532 1647 aa32.2■■■□□ 2.75
TUSC3-204ENST00000506802 BAZ1AQ9NRL2 1556 aaPredicted RBP32.11■■■□□ 2.73
TUSC3-204ENST00000506802 ATAD2BQ9ULI0 1458 aa32.09■■■□□ 2.73
TUSC3-204ENST00000506802 NCAPD3P42695 1498 aa32.07■■■□□ 2.72
TUSC3-204ENST00000506802 SMARCA2P51531 1590 aa32■■■□□ 2.71
TUSC3-204ENST00000506802 MROH2BQ7Z745 1585 aa31.95■■■□□ 2.71
TUSC3-204ENST00000506802 HMGXB3Q12766 1538 aa31.9■■■□□ 2.7
TUSC3-204ENST00000506802 PEG3Q9GZU2 1588 aa31.86■■■□□ 2.69
TUSC3-204ENST00000506802 BAZ1BQ9UIG0 1483 aaKnown RBP31.81■■■□□ 2.68
TUSC3-204ENST00000506802 WIZO95785 1651 aa31.6■■■□□ 2.65
TUSC3-204ENST00000506802 RSF1Q96T23 1441 aaPredicted RBP31.49■■■□□ 2.63
TUSC3-204ENST00000506802 NESP48681 1621 aa31.45■■■□□ 2.63
TUSC3-204ENST00000506802 ERCC6Q03468 1493 aa31.37■■■□□ 2.61
TUSC3-204ENST00000506802 LAMC3Q9Y6N6 1575 aa31.26■■■□□ 2.6
TUSC3-204ENST00000506802 TOP2AP11388 1531 aaKnown RBP31.22■■■□□ 2.59
TUSC3-204ENST00000506802 CADPSQ9ULU8 1353 aa31.13■■■□□ 2.57
TUSC3-204ENST00000506802 CUX2O14529 1486 aa31.09■■■□□ 2.57
TUSC3-204ENST00000506802 PDS5BQ9NTI5 1447 aa31.05■■■□□ 2.56
TUSC3-204ENST00000506802 KIF21AQ7Z4S6 1674 aa31.04■■■□□ 2.56
TUSC3-204ENST00000506802 THOC2Q8NI27 1593 aaKnown RBP31■■■□□ 2.55
TUSC3-204ENST00000506802 CFTRP13569 1480 aa30.91■■■□□ 2.54
TUSC3-204ENST00000506802 CCDC88BA6NC98 1476 aa30.87■■■□□ 2.53
TUSC3-204ENST00000506802 FANCD2Q9BXW9 1451 aa30.8■■■□□ 2.52
TUSC3-204ENST00000506802 MRC2Q9UBG0 1479 aa30.78■■■□□ 2.52
TUSC3-204ENST00000506802 CEP164Q9UPV0 1460 aa30.77■■■□□ 2.52
TUSC3-204ENST00000506802 WDR62O43379 1518 aa30.69■■■□□ 2.5
TUSC3-204ENST00000506802 PRDM2Q13029 1718 aa30.64■■■□□ 2.5
TUSC3-204ENST00000506802 SUPT5HO00267 1087 aaKnown RBP30.53■■■□□ 2.48
TUSC3-204ENST00000506802 URB2Q14146 1524 aaKnown RBP30.53■■■□□ 2.48
TUSC3-204ENST00000506802 DNAJC5Q9H3Z4 198 aa30.41■■■□□ 2.46
TUSC3-204ENST00000506802 TOPBP1Q92547 1522 aa30.29■■■□□ 2.44
TUSC3-204ENST00000506802 DNMBPQ6XZF7 1577 aa30.21■■■□□ 2.43
TUSC3-204ENST00000506802 ABCC8Q09428 1581 aa30.19■■■□□ 2.42
TUSC3-204ENST00000506802 IFT140Q96RY7 1462 aa30.12■■■□□ 2.41
TUSC3-204ENST00000506802 ZNF608Q9ULD9 1512 aaPredicted RBP30.07■■■□□ 2.4
TUSC3-204ENST00000506802 POLA1P09884 1462 aaPredicted RBP30.02■■■□□ 2.4
TUSC3-204ENST00000506802 CUX1P39880 1505 aa29.99■■■□□ 2.39
TUSC3-204ENST00000506802 TARBP1Q13395 1621 aaKnown RBP29.97■■■□□ 2.39
TUSC3-204ENST00000506802 EIF4G3O43432 1585 aaKnown RBP29.93■■■□□ 2.38
TUSC3-204ENST00000506802 FGD5Q6ZNL6 1462 aa29.92■■■□□ 2.38
TUSC3-204ENST00000506802 RAD54L2Q9Y4B4 1467 aa29.92■■■□□ 2.38
TUSC3-204ENST00000506802 SOGA1O94964 1423 aa29.86■■■□□ 2.37
TUSC3-204ENST00000506802 AQRO60306 1485 aaKnown RBP eCLIP29.85■■■□□ 2.37
TUSC3-204ENST00000506802 TDRD9Q8NDG6 1382 aaKnown RBP29.76■■■□□ 2.35
TUSC3-204ENST00000506802 OSCARQ8IYS5 282 aa29.74■■■□□ 2.35
TUSC3-204ENST00000506802 WRNQ14191 1432 aaPredicted RBP eCLIP29.68■■■□□ 2.34
TUSC3-204ENST00000506802 WDR97A6NE52 1622 aa29.68■■■□□ 2.34
TUSC3-204ENST00000506802 SYNJ1O43426 1573 aa29.66■■■□□ 2.34
TUSC3-204ENST00000506802 TOP2BQ02880 1626 aa29.64■■■□□ 2.34
TUSC3-204ENST00000506802 BIVM-ERCC5R4GMW8 1640 aa29.64■■■□□ 2.34
TUSC3-204ENST00000506802 ABCA10Q8WWZ4 1543 aa29.6■■■□□ 2.33
TUSC3-204ENST00000506802 CHD1O14646 1710 aa29.58■■■□□ 2.33
TUSC3-204ENST00000506802 SNAPC4Q5SXM2 1469 aa29.57■■■□□ 2.32
TUSC3-204ENST00000506802 GRIN2BQ13224 1484 aa29.54■■■□□ 2.32
TUSC3-204ENST00000506802 FBLN2P98095 1184 aa29.53■■■□□ 2.32
TUSC3-204ENST00000506802 GAPVD1Q14C86 1478 aa29.52■■■□□ 2.32
TUSC3-204ENST00000506802 ABCA5Q8WWZ7 1642 aa29.51■■■□□ 2.32
TUSC3-204ENST00000506802 PBRM1Q86U86 1689 aa29.49■■■□□ 2.31
TUSC3-204ENST00000506802 MAGI1Q96QZ7 1491 aaPredicted RBP29.48■■■□□ 2.31
TUSC3-204ENST00000506802 SYNJ2O15056 1496 aa29.38■■■□□ 2.29
TUSC3-204ENST00000506802 CHMP7Q8WUX9 453 aaPredicted RBP29.37■■■□□ 2.29
TUSC3-204ENST00000506802 TRIM41Q8WV44 630 aa29.36■■■□□ 2.29
TUSC3-204ENST00000506802 RIMBP3CA6NJZ7 1639 aa29.35■■■□□ 2.29
TUSC3-204ENST00000506802 RIMBP3BA6NNM3 1639 aa29.35■■■□□ 2.29
TUSC3-204ENST00000506802 RIMBP3Q9UFD9 1639 aa29.35■■■□□ 2.29
TUSC3-204ENST00000506802 ARHGEF11O15085 1522 aa29.32■■■□□ 2.28
TUSC3-204ENST00000506802 CLASP1Q7Z460 1538 aa29.26■■■□□ 2.27
TUSC3-204ENST00000506802 ADAMTS12P58397 1594 aa29.26■■■□□ 2.27
TUSC3-204ENST00000506802 ERICH3Q5RHP9 1530 aa29.22■■■□□ 2.27
TUSC3-204ENST00000506802 GRIN2AQ12879 1464 aa29.18■■■□□ 2.26
TUSC3-204ENST00000506802 FHAD1B1AJZ9 1412 aa29.16■■■□□ 2.26
TUSC3-204ENST00000506802 ARAP1Q96P48 1450 aa29.09■■■□□ 2.25
TUSC3-204ENST00000506802 CEP170Q5SW79 1584 aa29.07■■■□□ 2.24
TUSC3-204ENST00000506802 NUP160Q12769 1436 aa29.05■■■□□ 2.24
TUSC3-204ENST00000506802 KIF27Q86VH2 1401 aa29.05■■■□□ 2.24
TUSC3-204ENST00000506802 CYB5RLQ6IPT4 315 aa29.04■■■□□ 2.24
TUSC3-204ENST00000506802 IGF1RP08069 1367 aa28.99■■■□□ 2.23
TUSC3-204ENST00000506802 CUL7Q14999 1698 aa28.91■■■□□ 2.22
TUSC3-204ENST00000506802 ERCC6L2Q5T890 1561 aa28.89■■■□□ 2.21
TUSC3-204ENST00000506802 SHROOM2Q13796 1616 aa28.86■■■□□ 2.21
TUSC3-204ENST00000506802 RUSC2Q8N2Y8 1516 aa28.83■■■□□ 2.21
TUSC3-204ENST00000506802 CARMIL1Q5VZK9 1371 aa28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms