RNA–Protein interactions for RNA: ENST00000294256.12

SYVN1-201, Transcript of synoviolin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYVN1, Length 3,048 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-201ENST00000294256 NISCHQ9Y2I1 1504 aa36.3■■■■□ 3.4
SYVN1-201ENST00000294256 SHROOM4Q9ULL8 1493 aa31.58■■■□□ 2.65
SYVN1-201ENST00000294256 DCAF8L2P0C7V8 631 aa31.06■■■□□ 2.56
SYVN1-201ENST00000294256 SUPT5HO00267 1087 aaKnown RBP30.92■■■□□ 2.54
SYVN1-201ENST00000294256 CCDC180Q9P1Z9 1646 aa30.62■■■□□ 2.49
SYVN1-201ENST00000294256 ZCCHC6Q5VYS8 1495 aaKnown RBP30.6■■■□□ 2.49
SYVN1-201ENST00000294256 CHIC1Q5VXU3 224 aa29.65■■■□□ 2.34
SYVN1-201ENST00000294256 MYO15BQ96JP2 1530 aa29.46■■■□□ 2.31
SYVN1-201ENST00000294256 DCAF1Q9Y4B6 1507 aa29.44■■■□□ 2.3
SYVN1-201ENST00000294256 SCRIBQ14160 1630 aa29.2■■■□□ 2.27
SYVN1-201ENST00000294256 ABCC9O60706 1549 aa29.17■■■□□ 2.26
SYVN1-201ENST00000294256 LOC105371045A0A1W2PR82 267 aa29.05■■■□□ 2.24
SYVN1-201ENST00000294256 PCGF6Q9BYE7 350 aa28.88■■■□□ 2.21
SYVN1-201ENST00000294256 RSF1Q96T23 1441 aaPredicted RBP28.79■■■□□ 2.2
SYVN1-201ENST00000294256 EHMT2Q96KQ7 1210 aa28.75■■■□□ 2.19
SYVN1-201ENST00000294256 FAM9AQ8IZU1 332 aaPredicted RBP28.7■■■□□ 2.19
SYVN1-201ENST00000294256 TRIM41Q8WV44 630 aa28.61■■■□□ 2.17
SYVN1-201ENST00000294256 CECR2Q9BXF3 1484 aa28.57■■■□□ 2.16
SYVN1-201ENST00000294256 RB1CC1Q8TDY2 1594 aa28.51■■■□□ 2.15
SYVN1-201ENST00000294256 NACADO15069 1562 aa28.48■■■□□ 2.15
SYVN1-201ENST00000294256 HRCP23327 699 aa28.47■■■□□ 2.15
SYVN1-201ENST00000294256 MROH2BQ7Z745 1585 aa28.36■■■□□ 2.13
SYVN1-201ENST00000294256 PPARGC1BQ86YN6 1023 aaKnown RBP28.29■■■□□ 2.12
SYVN1-201ENST00000294256 WIZO95785 1651 aa28.21■■■□□ 2.11
SYVN1-201ENST00000294256 PABPN1Q86U42 306 aaKnown RBP eCLIP28.1■■■□□ 2.09
SYVN1-201ENST00000294256 TRIM26Q12899 539 aaPredicted RBP28.05■■■□□ 2.08
SYVN1-201ENST00000294256 BAZ1AQ9NRL2 1556 aaPredicted RBP27.86■■■□□ 2.05
SYVN1-201ENST00000294256 TTBK1Q5TCY1 1321 aaPredicted RBP27.72■■■□□ 2.03
SYVN1-201ENST00000294256 UNC13AQ9UPW8 1703 aa27.69■■■□□ 2.02
SYVN1-201ENST00000294256 ABCC8Q09428 1581 aa27.67■■■□□ 2.02
SYVN1-201ENST00000294256 SMARCA4P51532 1647 aa27.65■■■□□ 2.02
SYVN1-201ENST00000294256 CCDC88BA6NC98 1476 aa27.64■■■□□ 2.02
SYVN1-201ENST00000294256 TOP2AP11388 1531 aaKnown RBP27.56■■■□□ 2
SYVN1-201ENST00000294256 SMARCA2P51531 1590 aa27.47■■□□□ 1.99
SYVN1-201ENST00000294256 EIF4G1Q04637 1599 aaKnown RBP27.42■■□□□ 1.98
SYVN1-201ENST00000294256 SOGA1O94964 1423 aa27.41■■□□□ 1.98
SYVN1-201ENST00000294256 BICRAQ9NZM4 1560 aa27.39■■□□□ 1.97
SYVN1-201ENST00000294256 UBTFP17480 764 aaKnown RBP27.39■■□□□ 1.97
SYVN1-201ENST00000294256 RUSC2Q8N2Y8 1516 aa27.3■■□□□ 1.96
SYVN1-201ENST00000294256 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.28■■□□□ 1.96
SYVN1-201ENST00000294256 RANGAP1P46060 587 aaPredicted RBP27.25■■□□□ 1.95
SYVN1-201ENST00000294256 CSRNP3Q8WYN3 585 aa27.24■■□□□ 1.95
SYVN1-201ENST00000294256 ZEB1P37275 1124 aaPredicted RBP27.23■■□□□ 1.95
SYVN1-201ENST00000294256 CCER1Q8TC90 406 aaPredicted RBP27.14■■□□□ 1.93
SYVN1-201ENST00000294256 CEP162Q5TB80 1403 aa27.13■■□□□ 1.93
SYVN1-201ENST00000294256 WRNQ14191 1432 aaPredicted RBP eCLIP27.11■■□□□ 1.93
SYVN1-201ENST00000294256 BAZ1BQ9UIG0 1483 aaKnown RBP27.06■■□□□ 1.92
SYVN1-201ENST00000294256 ATAD2BQ9ULI0 1458 aa27.06■■□□□ 1.92
SYVN1-201ENST00000294256 TNIKQ9UKE5 1360 aa26.96■■□□□ 1.91
SYVN1-201ENST00000294256 SYNJ1O43426 1573 aa26.91■■□□□ 1.9
SYVN1-201ENST00000294256 PEG3Q9GZU2 1588 aa26.88■■□□□ 1.89
SYVN1-201ENST00000294256 EEA1Q15075 1411 aa26.86■■□□□ 1.89
SYVN1-201ENST00000294256 GOLGA3Q08378 1498 aa26.86■■□□□ 1.89
SYVN1-201ENST00000294256 HNRNPUL2Q1KMD3 747 aaKnown RBP26.78■■□□□ 1.88
SYVN1-201ENST00000294256 CEP164Q9UPV0 1460 aa26.69■■□□□ 1.86
SYVN1-201ENST00000294256 APLP2Q06481 763 aa26.69■■□□□ 1.86
SYVN1-201ENST00000294256 CLIP1P30622 1438 aa26.68■■□□□ 1.86
SYVN1-201ENST00000294256 RAPGEF2Q9Y4G8 1499 aa26.67■■□□□ 1.86
SYVN1-201ENST00000294256 KIF21BO75037 1637 aa26.48■■□□□ 1.83
SYVN1-201ENST00000294256 TOP2BQ02880 1626 aa26.44■■□□□ 1.82
SYVN1-201ENST00000294256 NCAPD3P42695 1498 aa26.44■■□□□ 1.82
SYVN1-201ENST00000294256 VPS8Q8N3P4 1428 aa26.42■■□□□ 1.82
SYVN1-201ENST00000294256 DIEXFQ68CQ4 756 aaKnown RBP26.41■■□□□ 1.82
SYVN1-201ENST00000294256 CUX1P39880 1505 aa26.36■■□□□ 1.81
SYVN1-201ENST00000294256 HMGXB3Q12766 1538 aa26.32■■□□□ 1.8
SYVN1-201ENST00000294256 KANK4Q5T7N3 995 aaPredicted RBP26.29■■□□□ 1.8
SYVN1-201ENST00000294256 ITGAEP38570 1179 aa26.27■■□□□ 1.8
SYVN1-201ENST00000294256 SCAF1Q9H7N4 1312 aaKnown RBP26.27■■□□□ 1.8
SYVN1-201ENST00000294256 KIF27Q86VH2 1401 aa26.26■■□□□ 1.79
SYVN1-201ENST00000294256 BIVM-ERCC5R4GMW8 1640 aa26.26■■□□□ 1.79
SYVN1-201ENST00000294256 CFTRP13569 1480 aa26.24■■□□□ 1.79
SYVN1-201ENST00000294256 PRXQ9BXM0 1461 aa26.21■■□□□ 1.79
SYVN1-201ENST00000294256 ATP1B4Q9UN42 357 aaPredicted RBP26.17■■□□□ 1.78
SYVN1-201ENST00000294256 P3H3Q8IVL6 736 aa26.17■■□□□ 1.78
SYVN1-201ENST00000294256 ZNF316A6NFI3 1004 aaPredicted RBP26.16■■□□□ 1.78
SYVN1-201ENST00000294256 CUX2O14529 1486 aa26.15■■□□□ 1.78
SYVN1-201ENST00000294256 ARAP1Q96P48 1450 aa26.14■■□□□ 1.77
SYVN1-201ENST00000294256 YTHDC1Q96MU7 727 aaKnown RBP26.13■■□□□ 1.77
SYVN1-201ENST00000294256 NEUROD1Q13562 356 aa26.11■■□□□ 1.77
SYVN1-201ENST00000294256 CADPSQ9ULU8 1353 aa26.1■■□□□ 1.77
SYVN1-201ENST00000294256 ERICH3Q5RHP9 1530 aa26.07■■□□□ 1.76
SYVN1-201ENST00000294256 IGF1RP08069 1367 aa26.01■■□□□ 1.75
SYVN1-201ENST00000294256 CC2D2AQ9P2K1 1620 aa26■■□□□ 1.75
SYVN1-201ENST00000294256 ACIN1Q9UKV3 1341 aaKnown RBP25.99■■□□□ 1.75
SYVN1-201ENST00000294256 FGD5Q6ZNL6 1462 aa25.99■■□□□ 1.75
SYVN1-201ENST00000294256 ARHGAP35Q9NRY4 1499 aa25.97■■□□□ 1.75
SYVN1-201ENST00000294256 CARMIL1Q5VZK9 1371 aa25.96■■□□□ 1.75
SYVN1-201ENST00000294256 NESP48681 1621 aa25.91■■□□□ 1.74
SYVN1-201ENST00000294256 MIER1Q8N108 512 aa25.91■■□□□ 1.74
SYVN1-201ENST00000294256 CENPBP07199 599 aaPredicted RBP25.89■■□□□ 1.74
SYVN1-201ENST00000294256 FANCD2Q9BXW9 1451 aa25.88■■□□□ 1.73
SYVN1-201ENST00000294256 RAD54L2Q9Y4B4 1467 aa25.88■■□□□ 1.73
SYVN1-201ENST00000294256 DNAJC5BQ9UF47 199 aa25.86■■□□□ 1.73
SYVN1-201ENST00000294256 GTF3C3Q9Y5Q9 886 aa25.86■■□□□ 1.73
SYVN1-201ENST00000294256 FAM50AQ14320 339 aaKnown RBP25.84■■□□□ 1.73
SYVN1-201ENST00000294256 DHX57Q6P158 1386 aaKnown RBP25.81■■□□□ 1.72
SYVN1-201ENST00000294256 CCNB3Q8WWL7 1395 aa25.8■■□□□ 1.72
SYVN1-201ENST00000294256 PRDM2Q13029 1718 aa25.74■■□□□ 1.71
SYVN1-201ENST00000294256 FHOD3Q2V2M9 1422 aa25.7■■□□□ 1.7
SYVN1-201ENST00000294256 RRBP1Q9P2E9 1410 aaKnown RBP25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms