Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 MYB-242ENST00000618728 3545 ntTSL 5 BASIC12.97□□□□□ -0.333e-7■■■□□ 16.7
SUB1P53999 MYB-201ENST00000316528 3571 ntTSL 5 BASIC12.93□□□□□ -0.343e-7■■■□□ 16.7
SUB1P53999 MYB-204ENST00000367812 3565 ntTSL 1 (best)12.93□□□□□ -0.343e-7■■■□□ 16.7
SUB1P53999 MYB-241ENST00000616088 3573 ntTSL 5 BASIC12.93□□□□□ -0.343e-7■■■□□ 16.7
SUB1P53999 MYB-218ENST00000526320 3081 ntTSL 1 (best)5.32□□□□□ -1.563e-7■■■□□ 16.7
SUB1P53999 MYB-236ENST00000533808 3349 ntTSL 1 (best)4.98□□□□□ -1.613e-7■■■□□ 16.7
SUB1P53999 MYB-215ENST00000525514 3288 ntTSL 1 (best)4.12□□□□□ -1.753e-7■■■□□ 16.7
SUB1P53999 MYB-233ENST00000531845 3230 ntTSL 24.03□□□□□ -1.763e-7■■■□□ 16.7
SUB1P53999 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.61□□□□□ -1.833e-7■■■□□ 16.7
SUB1P53999 MYB-208ENST00000438901 3481 ntTSL 1 (best)3.49□□□□□ -1.853e-7■■■□□ 16.7
SUB1P53999 MYB-220ENST00000526889 3157 ntTSL 1 (best)3.38□□□□□ -1.873e-7■■■□□ 16.7
SUB1P53999 MYB-229ENST00000529586 3203 ntTSL 1 (best)3.17□□□□□ -1.93e-7■■■□□ 16.7
SUB1P53999 MYB-230ENST00000531519 2911 ntTSL 1 (best)2.64□□□□□ -1.993e-7■■■□□ 16.7
SUB1P53999 COPZ1-201ENST00000262061 1897 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.082e-6■■■□□ 16.7
SUB1P53999 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.244e-8■■■□□ 16.7
SUB1P53999 HNRNPA1-209ENST00000550482 832 ntTSL 211.19□□□□□ -0.625e-48■■■□□ 16.7
SUB1P53999 HNRNPA1-206ENST00000547708 530 ntTSL 48.27□□□□□ -1.095e-48■■■□□ 16.7
SUB1P53999 GAS5-222ENST00000451607 1007 ntTSL 5 BASIC8.85□□□□□ -0.998e-16■■■□□ 16.7
SUB1P53999 GAS5-224ENST00000454068 688 ntTSL 5 BASIC7.76□□□□□ -1.178e-16■■■□□ 16.7
SUB1P53999 GAS5-228ENST00000456812 723 ntTSL 35.13□□□□□ -1.598e-16■■■□□ 16.7
SUB1P53999 GAS5-206ENST00000422183 745 ntTSL 24.89□□□□□ -1.638e-16■■■□□ 16.7
SUB1P53999 GAS5-218ENST00000448718 565 ntTSL 2 BASIC4.45□□□□□ -1.78e-16■■■□□ 16.7
SUB1P53999 GAS5-213ENST00000436285 772 ntTSL 22.93□□□□□ -1.948e-16■■■□□ 16.7
SUB1P53999 BLMH-205ENST00000578090 1483 ntTSL 210.63□□□□□ -0.713e-6■■■□□ 16.7
SUB1P53999 TOMM20-201ENST00000366607 3387 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.955e-7■■■□□ 16.7
SUB1P53999 KPNB1-209ENST00000580158 603 ntTSL 23.91□□□□□ -1.783e-10■■■□□ 16.6
SUB1P53999 BAG6-245ENST00000437771 2407 ntTSL 512.58□□□□□ -0.45e-7■■■□□ 16.6
SUB1P53999 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.79■□□□□ 0.282e-6■■■□□ 16.6
SUB1P53999 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.122e-6■■■□□ 16.6
SUB1P53999 ACADVL-201ENST00000322910 2352 ntTSL 214.89□□□□□ -0.032e-6■■■□□ 16.6
SUB1P53999 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC14.47□□□□□ -0.092e-6■■■□□ 16.6
SUB1P53999 ACADVL-237ENST00000583858 1015 ntTSL 514.32□□□□□ -0.122e-6■■■□□ 16.6
SUB1P53999 ACADVL-236ENST00000583850 903 ntTSL 214.18□□□□□ -0.142e-6■■■□□ 16.6
SUB1P53999 ACADVL-214ENST00000578711 1732 nt13.13□□□□□ -0.312e-6■■■□□ 16.6
SUB1P53999 ACADVL-204ENST00000542255 1016 ntTSL 512.63□□□□□ -0.392e-6■■■□□ 16.6
SUB1P53999 ACADVL-219ENST00000579425 1234 ntTSL 511.08□□□□□ -0.642e-6■■■□□ 16.6
SUB1P53999 ACADVL-215ENST00000578809 709 ntTSL 210.09□□□□□ -0.792e-6■■■□□ 16.6
SUB1P53999 ACADVL-211ENST00000578319 718 ntTSL 39.53□□□□□ -0.882e-6■■■□□ 16.6
SUB1P53999 ACADVL-235ENST00000583848 503 ntTSL 38.94□□□□□ -0.982e-6■■■□□ 16.6
SUB1P53999 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.058e-7■■■□□ 16.6
SUB1P53999 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.75□□□□□ -2.138e-7■■■□□ 16.6
SUB1P53999 SLC25A3-208ENST00000547908 893 ntTSL 25.12□□□□□ -1.594e-7■■■□□ 16.6
SUB1P53999 GAS5-229ENST00000458220 469 ntTSL 23.09□□□□□ -1.911e-18■■■□□ 16.6
SUB1P53999 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.893e-6■■■□□ 16.6
SUB1P53999 ADAM15-226ENST00000527418 4508 ntTSL 217.95■□□□□ 0.463e-6■■■□□ 16.6
SUB1P53999 H2AFY-208ENST00000506218 758 ntTSL 317.89■□□□□ 0.453e-6■■■□□ 16.6
SUB1P53999 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC17.85■□□□□ 0.453e-6■■■□□ 16.6
SUB1P53999 H2AFY-211ENST00000507868 861 ntTSL 217.85■□□□□ 0.453e-6■■■□□ 16.6
SUB1P53999 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.423e-6■■■□□ 16.6
SUB1P53999 H2AFY-212ENST00000508120 536 ntTSL 316.96■□□□□ 0.313e-6■■■□□ 16.6
SUB1P53999 GSTO1-204ENST00000445155 829 ntTSL 216.73■□□□□ 0.276e-9■■■□□ 16.6
SUB1P53999 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.123e-6■■■□□ 16.6
SUB1P53999 EXOC3-202ENST00000503889 5365 ntTSL 515.61■□□□□ 0.093e-6■■■□□ 16.6
SUB1P53999 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.033e-6■■■□□ 16.6
SUB1P53999 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.053e-6■■■□□ 16.6
SUB1P53999 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC14.61□□□□□ -0.073e-6■■■□□ 16.6
SUB1P53999 EXOC3-210ENST00000515601 5748 ntTSL 514.55□□□□□ -0.083e-6■■■□□ 16.6
SUB1P53999 C1orf43-207ENST00000470180 1861 ntTSL 513.53□□□□□ -0.243e-6■■■□□ 16.6
SUB1P53999 RHOT2-215ENST00000566965 879 ntTSL 513.51□□□□□ -0.253e-6■■■□□ 16.6
SUB1P53999 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.273e-6■■■□□ 16.6
SUB1P53999 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.283e-6■■■□□ 16.6
SUB1P53999 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.2□□□□□ -0.33e-6■■■□□ 16.6
SUB1P53999 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC13.15□□□□□ -0.33e-6■■■□□ 16.6
SUB1P53999 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.1□□□□□ -0.316e-9■■■□□ 16.6
SUB1P53999 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.09□□□□□ -0.313e-6■■■□□ 16.6
SUB1P53999 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13□□□□□ -0.333e-6■■■□□ 16.6
SUB1P53999 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC12.99□□□□□ -0.333e-6■■■□□ 16.6
SUB1P53999 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.333e-6■■■□□ 16.6
SUB1P53999 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC12.86□□□□□ -0.353e-6■■■□□ 16.6
SUB1P53999 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.353e-6■■■□□ 16.6
SUB1P53999 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.363e-6■■■□□ 16.6
SUB1P53999 ARPC4-207ENST00000485273 577 ntTSL 212.74□□□□□ -0.376e-9■■■□□ 16.6
SUB1P53999 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.376e-9■■■□□ 16.6
SUB1P53999 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.413e-6■■■□□ 16.6
SUB1P53999 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC12.44□□□□□ -0.423e-6■■■□□ 16.6
SUB1P53999 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC12.34□□□□□ -0.436e-9■■■□□ 16.6
SUB1P53999 HPS1-207ENST00000465957 922 ntTSL 212.24□□□□□ -0.453e-6■■■□□ 16.6
SUB1P53999 H2AFY-213ENST00000508785 966 ntTSL 212.23□□□□□ -0.453e-6■■■□□ 16.6
SUB1P53999 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.463e-6■■■□□ 16.6
SUB1P53999 ADAM15-216ENST00000472434 2894 ntTSL 512.16□□□□□ -0.463e-6■■■□□ 16.6
SUB1P53999 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.473e-6■■■□□ 16.6
SUB1P53999 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.483e-6■■■□□ 16.6
SUB1P53999 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC11.89□□□□□ -0.513e-6■■■□□ 16.6
SUB1P53999 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.513e-6■■■□□ 16.6
SUB1P53999 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC11.86□□□□□ -0.513e-6■■■□□ 16.6
SUB1P53999 FLNC-203ENST00000388853 570 ntTSL 211.64□□□□□ -0.553e-6■■■□□ 16.6
SUB1P53999 ADAM15-211ENST00000461564 2751 ntTSL 211.64□□□□□ -0.553e-6■■■□□ 16.6
SUB1P53999 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.563e-6■■■□□ 16.6
SUB1P53999 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.563e-6■■■□□ 16.6
SUB1P53999 ADAM15-225ENST00000526491 3091 ntTSL 1 (best)11.55□□□□□ -0.563e-6■■■□□ 16.6
SUB1P53999 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.573e-6■■■□□ 16.6
SUB1P53999 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.573e-6■■■□□ 16.6
SUB1P53999 ADAM15-227ENST00000529473 3016 ntTSL 1 (best)11.44□□□□□ -0.583e-6■■■□□ 16.6
SUB1P53999 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.593e-6■■■□□ 16.6
SUB1P53999 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.593e-6■■■□□ 16.6
SUB1P53999 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.63e-6■■■□□ 16.6
SUB1P53999 COLGALT1-202ENST00000593832 2941 ntTSL 211.32□□□□□ -0.63e-6■■■□□ 16.6
SUB1P53999 HPS1-214ENST00000498219 845 ntTSL 511.2□□□□□ -0.623e-6■■■□□ 16.6
SUB1P53999 NUP210-203ENST00000479519 1312 ntTSL 1 (best)10.92□□□□□ -0.663e-6■■■□□ 16.6
SUB1P53999 GSTO1-205ENST00000470554 547 ntTSL 210.81□□□□□ -0.686e-9■■■□□ 16.6
Retrieved 100 of 11,644 protein–RNA pairs in 182.5 ms