RNA–Protein interactions for RNA: ENST00000547708.5

HNRNPA1-206, Transcript of heterogeneous nuclear ribonucleoprotein A1, humanhuman

TSL 4

Gene HNRNPA1, Length 530 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPA1-206ENST00000547708 NISCHQ9Y2I1 1504 aa26.83■■□□□ 1.89
HNRNPA1-206ENST00000547708 CCDC180Q9P1Z9 1646 aa23.89■■□□□ 1.42
HNRNPA1-206ENST00000547708 ABCC9O60706 1549 aa23.24■■□□□ 1.31
HNRNPA1-206ENST00000547708 RB1CC1Q8TDY2 1594 aa22.39■■□□□ 1.18
HNRNPA1-206ENST00000547708 NACADO15069 1562 aa22.38■■□□□ 1.17
HNRNPA1-206ENST00000547708 ZCCHC6Q5VYS8 1495 aaKnown RBP22.38■■□□□ 1.17
HNRNPA1-206ENST00000547708 MYO15BQ96JP2 1530 aa22.28■■□□□ 1.16
HNRNPA1-206ENST00000547708 DCAF1Q9Y4B6 1507 aa22.21■■□□□ 1.15
HNRNPA1-206ENST00000547708 DCAF8L2P0C7V8 631 aa22.19■■□□□ 1.14
HNRNPA1-206ENST00000547708 UNC13AQ9UPW8 1703 aa22.05■■□□□ 1.12
HNRNPA1-206ENST00000547708 BICRAQ9NZM4 1560 aa21.81■■□□□ 1.08
HNRNPA1-206ENST00000547708 SCRIBQ14160 1630 aa21.76■■□□□ 1.07
HNRNPA1-206ENST00000547708 PABPN1Q86U42 306 aaKnown RBP eCLIP21.67■■□□□ 1.06
HNRNPA1-206ENST00000547708 SHROOM4Q9ULL8 1493 aa21.5■■□□□ 1.03
HNRNPA1-206ENST00000547708 DNAJC5BQ9UF47 199 aa21.32■■□□□ 1
HNRNPA1-206ENST00000547708 EIF4G1Q04637 1599 aaKnown RBP21.18■□□□□ 0.98
HNRNPA1-206ENST00000547708 CC2D2AQ9P2K1 1620 aa21.08■□□□□ 0.97
HNRNPA1-206ENST00000547708 CECR2Q9BXF3 1484 aa20.9■□□□□ 0.94
HNRNPA1-206ENST00000547708 SMARCA4P51532 1647 aa20.84■□□□□ 0.93
HNRNPA1-206ENST00000547708 BAZ1AQ9NRL2 1556 aaPredicted RBP20.77■□□□□ 0.92
HNRNPA1-206ENST00000547708 MROH2BQ7Z745 1585 aa20.69■□□□□ 0.9
HNRNPA1-206ENST00000547708 ATAD2BQ9ULI0 1458 aa20.67■□□□□ 0.9
HNRNPA1-206ENST00000547708 PEG3Q9GZU2 1588 aa20.65■□□□□ 0.9
HNRNPA1-206ENST00000547708 NCAPD3P42695 1498 aa20.64■□□□□ 0.89
HNRNPA1-206ENST00000547708 SMARCA2P51531 1590 aa20.63■□□□□ 0.89
HNRNPA1-206ENST00000547708 HMGXB3Q12766 1538 aa20.58■□□□□ 0.88
HNRNPA1-206ENST00000547708 WIZO95785 1651 aa20.49■□□□□ 0.87
HNRNPA1-206ENST00000547708 BAZ1BQ9UIG0 1483 aaKnown RBP20.47■□□□□ 0.87
HNRNPA1-206ENST00000547708 RSF1Q96T23 1441 aaPredicted RBP20.44■□□□□ 0.86
HNRNPA1-206ENST00000547708 TOP2AP11388 1531 aaKnown RBP20.25■□□□□ 0.83
HNRNPA1-206ENST00000547708 NESP48681 1621 aa20.16■□□□□ 0.82
HNRNPA1-206ENST00000547708 LAMC3Q9Y6N6 1575 aa20.12■□□□□ 0.81
HNRNPA1-206ENST00000547708 CADPSQ9ULU8 1353 aa20■□□□□ 0.79
HNRNPA1-206ENST00000547708 KIF21AQ7Z4S6 1674 aa20■□□□□ 0.79
HNRNPA1-206ENST00000547708 CCDC88BA6NC98 1476 aa19.99■□□□□ 0.79
HNRNPA1-206ENST00000547708 ERCC6Q03468 1493 aa19.97■□□□□ 0.79
HNRNPA1-206ENST00000547708 CFTRP13569 1480 aa19.94■□□□□ 0.78
HNRNPA1-206ENST00000547708 THOC2Q8NI27 1593 aaKnown RBP19.91■□□□□ 0.78
HNRNPA1-206ENST00000547708 PRDM2Q13029 1718 aa19.91■□□□□ 0.78
HNRNPA1-206ENST00000547708 PDS5BQ9NTI5 1447 aa19.89■□□□□ 0.77
HNRNPA1-206ENST00000547708 SUPT5HO00267 1087 aaKnown RBP19.81■□□□□ 0.76
HNRNPA1-206ENST00000547708 CUX2O14529 1486 aa19.79■□□□□ 0.76
HNRNPA1-206ENST00000547708 FANCD2Q9BXW9 1451 aa19.79■□□□□ 0.76
HNRNPA1-206ENST00000547708 CEP164Q9UPV0 1460 aa19.77■□□□□ 0.76
HNRNPA1-206ENST00000547708 MRC2Q9UBG0 1479 aa19.74■□□□□ 0.75
HNRNPA1-206ENST00000547708 WDR62O43379 1518 aa19.72■□□□□ 0.75
HNRNPA1-206ENST00000547708 URB2Q14146 1524 aaKnown RBP19.65■□□□□ 0.74
HNRNPA1-206ENST00000547708 TOPBP1Q92547 1522 aa19.51■□□□□ 0.71
HNRNPA1-206ENST00000547708 DNMBPQ6XZF7 1577 aa19.51■□□□□ 0.71
HNRNPA1-206ENST00000547708 ABCC8Q09428 1581 aa19.46■□□□□ 0.71
HNRNPA1-206ENST00000547708 CUX1P39880 1505 aa19.41■□□□□ 0.7
HNRNPA1-206ENST00000547708 TARBP1Q13395 1621 aaKnown RBP19.36■□□□□ 0.69
HNRNPA1-206ENST00000547708 POLA1P09884 1462 aaPredicted RBP19.35■□□□□ 0.69
HNRNPA1-206ENST00000547708 IFT140Q96RY7 1462 aa19.35■□□□□ 0.69
HNRNPA1-206ENST00000547708 ZNF608Q9ULD9 1512 aaPredicted RBP19.3■□□□□ 0.68
HNRNPA1-206ENST00000547708 FGD5Q6ZNL6 1462 aa19.3■□□□□ 0.68
HNRNPA1-206ENST00000547708 BIVM-ERCC5R4GMW8 1640 aa19.29■□□□□ 0.68
HNRNPA1-206ENST00000547708 SYNJ1O43426 1573 aa19.27■□□□□ 0.68
HNRNPA1-206ENST00000547708 EIF4G3O43432 1585 aaKnown RBP19.27■□□□□ 0.67
HNRNPA1-206ENST00000547708 WDR97A6NE52 1622 aa19.26■□□□□ 0.67
HNRNPA1-206ENST00000547708 RAD54L2Q9Y4B4 1467 aa19.26■□□□□ 0.67
HNRNPA1-206ENST00000547708 TOP2BQ02880 1626 aa19.25■□□□□ 0.67
HNRNPA1-206ENST00000547708 WRNQ14191 1432 aaPredicted RBP eCLIP19.23■□□□□ 0.67
HNRNPA1-206ENST00000547708 SOGA1O94964 1423 aa19.21■□□□□ 0.67
HNRNPA1-206ENST00000547708 AQRO60306 1485 aaKnown RBP eCLIP19.16■□□□□ 0.661e-13■■■□□ 18.5
HNRNPA1-206ENST00000547708 ABCA10Q8WWZ4 1543 aa19.12■□□□□ 0.65
HNRNPA1-206ENST00000547708 ABCA5Q8WWZ7 1642 aa19.11■□□□□ 0.65
HNRNPA1-206ENST00000547708 TDRD9Q8NDG6 1382 aaKnown RBP19.1■□□□□ 0.65
HNRNPA1-206ENST00000547708 DNAJC5Q9H3Z4 198 aa19.1■□□□□ 0.65
HNRNPA1-206ENST00000547708 PBRM1Q86U86 1689 aa19.08■□□□□ 0.65
HNRNPA1-206ENST00000547708 CHD1O14646 1710 aa19.04■□□□□ 0.64
HNRNPA1-206ENST00000547708 GRIN2BQ13224 1484 aa19.01■□□□□ 0.63
HNRNPA1-206ENST00000547708 GAPVD1Q14C86 1478 aa19.01■□□□□ 0.63
HNRNPA1-206ENST00000547708 SNAPC4Q5SXM2 1469 aa19■□□□□ 0.63
HNRNPA1-206ENST00000547708 MAGI1Q96QZ7 1491 aaPredicted RBP18.97■□□□□ 0.63
HNRNPA1-206ENST00000547708 ADAMTS12P58397 1594 aa18.9■□□□□ 0.62
HNRNPA1-206ENST00000547708 OSCARQ8IYS5 282 aa18.89■□□□□ 0.61
HNRNPA1-206ENST00000547708 SYNJ2O15056 1496 aa18.89■□□□□ 0.61
HNRNPA1-206ENST00000547708 ERICH3Q5RHP9 1530 aa18.89■□□□□ 0.61
HNRNPA1-206ENST00000547708 CLASP1Q7Z460 1538 aa18.81■□□□□ 0.6
HNRNPA1-206ENST00000547708 FBLN2P98095 1184 aa18.8■□□□□ 0.6
HNRNPA1-206ENST00000547708 KIF27Q86VH2 1401 aa18.8■□□□□ 0.6
HNRNPA1-206ENST00000547708 GRIN2AQ12879 1464 aa18.79■□□□□ 0.6
HNRNPA1-206ENST00000547708 FHAD1B1AJZ9 1412 aa18.79■□□□□ 0.6
HNRNPA1-206ENST00000547708 CHMP7Q8WUX9 453 aaPredicted RBP18.77■□□□□ 0.6
HNRNPA1-206ENST00000547708 CUL7Q14999 1698 aa18.75■□□□□ 0.59
HNRNPA1-206ENST00000547708 RIMBP3CA6NJZ7 1639 aa18.74■□□□□ 0.59
HNRNPA1-206ENST00000547708 RIMBP3BA6NNM3 1639 aa18.74■□□□□ 0.59
HNRNPA1-206ENST00000547708 RIMBP3Q9UFD9 1639 aa18.74■□□□□ 0.59
HNRNPA1-206ENST00000547708 CEP170Q5SW79 1584 aa18.74■□□□□ 0.59
HNRNPA1-206ENST00000547708 IGF1RP08069 1367 aa18.74■□□□□ 0.59
HNRNPA1-206ENST00000547708 RUSC2Q8N2Y8 1516 aa18.73■□□□□ 0.59
HNRNPA1-206ENST00000547708 NUP160Q12769 1436 aa18.72■□□□□ 0.59
HNRNPA1-206ENST00000547708 ARHGEF11O15085 1522 aa18.7■□□□□ 0.58
HNRNPA1-206ENST00000547708 TRIM41Q8WV44 630 aa18.7■□□□□ 0.58
HNRNPA1-206ENST00000547708 SHROOM2Q13796 1616 aa18.63■□□□□ 0.57
HNRNPA1-206ENST00000547708 CARMIL1Q5VZK9 1371 aa18.6■□□□□ 0.57
HNRNPA1-206ENST00000547708 ARAP1Q96P48 1450 aa18.58■□□□□ 0.56
HNRNPA1-206ENST00000547708 ERCC6L2Q5T890 1561 aa18.57■□□□□ 0.56
HNRNPA1-206ENST00000547708 CHIC1Q5VXU3 224 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms