RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-209ENST00000580158 AEBP2Q6ZN18 517 aaPredicted RBP21.52■■□□□ 1.04
KPNB1-209ENST00000580158 CHIC1Q5VXU3 224 aa20.43■□□□□ 0.86
KPNB1-209ENST00000580158 SENP3Q9H4L4 574 aaPredicted RBP18.45■□□□□ 0.54
KPNB1-209ENST00000580158 PHF23Q9BUL5 403 aaPredicted RBP18.2■□□□□ 0.5
KPNB1-209ENST00000580158 FOXD1Q16676 465 aa17.16■□□□□ 0.34
KPNB1-209ENST00000580158 PLPPR3Q6T4P5 718 aa16.34■□□□□ 0.21
KPNB1-209ENST00000580158 MSH5O43196 834 aa16.13■□□□□ 0.17
KPNB1-209ENST00000580158 PIAS4Q8N2W9 510 aaPredicted RBP16.05■□□□□ 0.16
KPNB1-209ENST00000580158 PPP6R1Q9UPN7 881 aa15.99■□□□□ 0.15
KPNB1-209ENST00000580158 ADRA2BP18089 450 aa15.96■□□□□ 0.15
KPNB1-209ENST00000580158 POTEDQ86YR6 584 aa15.8■□□□□ 0.12
KPNB1-209ENST00000580158 NISCHQ9Y2I1 1504 aa15.56■□□□□ 0.08
KPNB1-209ENST00000580158 ABCC9O60706 1549 aa14.86□□□□□ -0.03
KPNB1-209ENST00000580158 SCAF1Q9H7N4 1312 aaKnown RBP14.7□□□□□ -0.06
KPNB1-209ENST00000580158 MAPK8IP2Q13387 824 aaPredicted RBP14.67□□□□□ -0.06
KPNB1-209ENST00000580158 DMRT2Q9Y5R5 561 aa14.59□□□□□ -0.07
KPNB1-209ENST00000580158 DNAJC5BQ9UF47 199 aa14.44□□□□□ -0.1
KPNB1-209ENST00000580158 CCDC180Q9P1Z9 1646 aa14.3□□□□□ -0.12
KPNB1-209ENST00000580158 PPP4R3CPQ6ZMV5 832 aa14.3□□□□□ -0.12
KPNB1-209ENST00000580158 DCAF8L1A6NGE4 600 aa14.07□□□□□ -0.16
KPNB1-209ENST00000580158 CNKSR2Q8WXI2 1034 aa14.07□□□□□ -0.16
KPNB1-209ENST00000580158 HOXD11P31277 338 aaPredicted RBP14.03□□□□□ -0.16
KPNB1-209ENST00000580158 RNF216Q9NWF9 866 aaPredicted RBP13.93□□□□□ -0.18
KPNB1-209ENST00000580158 RB1CC1Q8TDY2 1594 aa13.92□□□□□ -0.18
KPNB1-209ENST00000580158 CACNB1Q02641 598 aaPredicted RBP13.9□□□□□ -0.18
KPNB1-209ENST00000580158 DNAJC5Q9H3Z4 198 aa13.8□□□□□ -0.2
KPNB1-209ENST00000580158 NCBP3Q53F19 620 aaKnown RBP13.79□□□□□ -0.2
KPNB1-209ENST00000580158 PABPN1Q86U42 306 aaKnown RBP eCLIP13.73□□□□□ -0.216e-6■■□□□ 12.8
KPNB1-209ENST00000580158 RNF39Q9H2S5 420 aa13.72□□□□□ -0.21
KPNB1-209ENST00000580158 NACADO15069 1562 aa13.66□□□□□ -0.22
KPNB1-209ENST00000580158 UNC13AQ9UPW8 1703 aa13.64□□□□□ -0.23
KPNB1-209ENST00000580158 C1QBPQ07021 282 aaKnown RBP13.56□□□□□ -0.24
KPNB1-209ENST00000580158 NPM3O75607 178 aaKnown RBP13.51□□□□□ -0.25
KPNB1-209ENST00000580158 DCAF8L2P0C7V8 631 aa13.5□□□□□ -0.25
KPNB1-209ENST00000580158 BICRAQ9NZM4 1560 aa13.46□□□□□ -0.25
KPNB1-209ENST00000580158 CECR2Q9BXF3 1484 aa13.46□□□□□ -0.25
KPNB1-209ENST00000580158 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.44□□□□□ -0.265e-10■□□□□ 11.1
KPNB1-209ENST00000580158 CC2D2AQ9P2K1 1620 aa13.42□□□□□ -0.26
KPNB1-209ENST00000580158 SHROOM4Q9ULL8 1493 aa13.25□□□□□ -0.29
KPNB1-209ENST00000580158 MYO15BQ96JP2 1530 aa13.22□□□□□ -0.29
KPNB1-209ENST00000580158 EIF4G1Q04637 1599 aaKnown RBP13.21□□□□□ -0.29
KPNB1-209ENST00000580158 KCNA4P22459 653 aa13.19□□□□□ -0.3
KPNB1-209ENST00000580158 CUX2O14529 1486 aa13.1□□□□□ -0.31
KPNB1-209ENST00000580158 U3KPZ7 1027 aaPredicted RBP13.07□□□□□ -0.32
KPNB1-209ENST00000580158 TRIM41Q8WV44 630 aa12.97□□□□□ -0.33
KPNB1-209ENST00000580158 SCRIBQ14160 1630 aa12.95□□□□□ -0.34
KPNB1-209ENST00000580158 CAPN15O75808 1086 aa12.94□□□□□ -0.34
KPNB1-209ENST00000580158 ERCC6Q03468 1493 aa12.92□□□□□ -0.34
KPNB1-209ENST00000580158 SPINK5Q9NQ38 1064 aaPredicted RBP12.9□□□□□ -0.34
KPNB1-209ENST00000580158 SLC4A2P04920 1241 aa12.89□□□□□ -0.35
KPNB1-209ENST00000580158 DSG3P32926 999 aa12.84□□□□□ -0.35
KPNB1-209ENST00000580158 APLP2Q06481 763 aa12.82□□□□□ -0.36
KPNB1-209ENST00000580158 DCAF1Q9Y4B6 1507 aa12.81□□□□□ -0.36
KPNB1-209ENST00000580158 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.78□□□□□ -0.36
KPNB1-209ENST00000580158 HNRNPUL2Q1KMD3 747 aaKnown RBP12.78□□□□□ -0.36
KPNB1-209ENST00000580158 ZCCHC6Q5VYS8 1495 aaKnown RBP12.73□□□□□ -0.37
KPNB1-209ENST00000580158 TRHP20396 242 aaPredicted RBP12.73□□□□□ -0.37
KPNB1-209ENST00000580158 ZNF219Q9P2Y4 722 aaPredicted RBP12.7□□□□□ -0.38
KPNB1-209ENST00000580158 SAMD1Q6SPF0 538 aaPredicted RBP12.67□□□□□ -0.38
KPNB1-209ENST00000580158 ABCB7O75027 752 aa12.6□□□□□ -0.39
KPNB1-209ENST00000580158 THOC2Q8NI27 1593 aaKnown RBP12.58□□□□□ -0.4
KPNB1-209ENST00000580158 NCAPD3P42695 1498 aa12.57□□□□□ -0.4
KPNB1-209ENST00000580158 NESP48681 1621 aa12.56□□□□□ -0.4
KPNB1-209ENST00000580158 MYCNP04198 464 aaPredicted RBP12.53□□□□□ -0.4
KPNB1-209ENST00000580158 SLC4A1APQ9BWU0 796 aaKnown RBP12.49□□□□□ -0.41
KPNB1-209ENST00000580158 SMARCA2P51531 1590 aa12.47□□□□□ -0.41
KPNB1-209ENST00000580158 KIF21AQ7Z4S6 1674 aa12.46□□□□□ -0.41
KPNB1-209ENST00000580158 LAMC3Q9Y6N6 1575 aa12.44□□□□□ -0.42
KPNB1-209ENST00000580158 HMGXB3Q12766 1538 aa12.43□□□□□ -0.42
KPNB1-209ENST00000580158 ATAD2BQ9ULI0 1458 aa12.43□□□□□ -0.42
KPNB1-209ENST00000580158 OSCARQ8IYS5 282 aa12.43□□□□□ -0.42
KPNB1-209ENST00000580158 BAZ1AQ9NRL2 1556 aaPredicted RBP12.42□□□□□ -0.42
KPNB1-209ENST00000580158 POTEHQ6S545 545 aa12.39□□□□□ -0.43
KPNB1-209ENST00000580158 PDS5BQ9NTI5 1447 aa12.38□□□□□ -0.43
KPNB1-209ENST00000580158 POLA2Q14181 598 aa12.36□□□□□ -0.43
KPNB1-209ENST00000580158 FOXD4L1Q9NU39 408 aa12.36□□□□□ -0.43
KPNB1-209ENST00000580158 BAZ1BQ9UIG0 1483 aaKnown RBP12.32□□□□□ -0.44
KPNB1-209ENST00000580158 RBM42Q9BTD8 480 aaKnown RBP12.31□□□□□ -0.44
KPNB1-209ENST00000580158 RIMBP3CA6NJZ7 1639 aa12.3□□□□□ -0.44
KPNB1-209ENST00000580158 RIMBP3BA6NNM3 1639 aa12.3□□□□□ -0.44
KPNB1-209ENST00000580158 RIMBP3Q9UFD9 1639 aa12.3□□□□□ -0.44
KPNB1-209ENST00000580158 SMARCA4P51532 1647 aa12.29□□□□□ -0.44
KPNB1-209ENST00000580158 MRC2Q9UBG0 1479 aa12.28□□□□□ -0.44
KPNB1-209ENST00000580158 WDR62O43379 1518 aa12.27□□□□□ -0.45
KPNB1-209ENST00000580158 ATF5Q9Y2D1 282 aaPredicted RBP12.19□□□□□ -0.46
KPNB1-209ENST00000580158 ARHGEF11O15085 1522 aa12.17□□□□□ -0.46
KPNB1-209ENST00000580158 CYB5RLQ6IPT4 315 aa12.17□□□□□ -0.46
KPNB1-209ENST00000580158 CADPSQ9ULU8 1353 aa12.17□□□□□ -0.46
KPNB1-209ENST00000580158 PEG3Q9GZU2 1588 aa12.16□□□□□ -0.46
KPNB1-209ENST00000580158 ZBTB12Q9Y330 459 aaPredicted RBP12.13□□□□□ -0.47
KPNB1-209ENST00000580158 CEP164Q9UPV0 1460 aa12.13□□□□□ -0.47
KPNB1-209ENST00000580158 ZBTB22O15209 634 aa12.08□□□□□ -0.48
KPNB1-209ENST00000580158 FANCD2Q9BXW9 1451 aa12.03□□□□□ -0.48
KPNB1-209ENST00000580158 CHRDL2Q6WN34 429 aa12.02□□□□□ -0.49
KPNB1-209ENST00000580158 ATXN8OSP0DMR3 200 aa12.01□□□□□ -0.49
KPNB1-209ENST00000580158 AKT1S1Q96B36 256 aa12□□□□□ -0.49
KPNB1-209ENST00000580158 ARAP1Q96P48 1450 aa11.98□□□□□ -0.49
KPNB1-209ENST00000580158 MROH2BQ7Z745 1585 aa11.96□□□□□ -0.5
KPNB1-209ENST00000580158 URB2Q14146 1524 aaKnown RBP11.94□□□□□ -0.5
KPNB1-209ENST00000580158 CHD1O14646 1710 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms