RNA–Protein interactions for RNA: ENST00000506218.1

H2AFY-208, Transcript of H2A histone family member Y, humanhuman

TSL 3

Gene H2AFY, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFY-208ENST00000506218 NISCHQ9Y2I1 1504 aa59.68■■■■■ 7.14
H2AFY-208ENST00000506218 ABCC9O60706 1549 aa54.48■■■■■ 6.31
H2AFY-208ENST00000506218 CCDC180Q9P1Z9 1646 aa53.69■■■■■ 6.19
H2AFY-208ENST00000506218 DNAJC5BQ9UF47 199 aa51.74■■■■■ 5.87
H2AFY-208ENST00000506218 RB1CC1Q8TDY2 1594 aa51.57■■■■■ 5.85
H2AFY-208ENST00000506218 NACADO15069 1562 aa51.07■■■■■ 5.77
H2AFY-208ENST00000506218 DCAF8L2P0C7V8 631 aa50.87■■■■■ 5.73
H2AFY-208ENST00000506218 PABPN1Q86U42 306 aaKnown RBP eCLIP50.72■■■■■ 5.71
H2AFY-208ENST00000506218 MYO15BQ96JP2 1530 aa50.21■■■■■ 5.63
H2AFY-208ENST00000506218 UNC13AQ9UPW8 1703 aa50.02■■■■■ 5.6
H2AFY-208ENST00000506218 BICRAQ9NZM4 1560 aa49.96■■■■■ 5.59
H2AFY-208ENST00000506218 SHROOM4Q9ULL8 1493 aa49.43■■■■■ 5.5
H2AFY-208ENST00000506218 ZCCHC6Q5VYS8 1495 aaKnown RBP49.41■■■■■ 5.5
H2AFY-208ENST00000506218 DCAF1Q9Y4B6 1507 aa49.29■■■■■ 5.48
H2AFY-208ENST00000506218 CECR2Q9BXF3 1484 aa49.2■■■■■ 5.47
H2AFY-208ENST00000506218 CC2D2AQ9P2K1 1620 aa49.09■■■■■ 5.45
H2AFY-208ENST00000506218 SCRIBQ14160 1630 aa48.9■■■■■ 5.42
H2AFY-208ENST00000506218 EIF4G1Q04637 1599 aaKnown RBP48.87■■■■■ 5.41
H2AFY-208ENST00000506218 DNAJC5Q9H3Z4 198 aa48.13■■■■■ 5.3
H2AFY-208ENST00000506218 CUX2O14529 1486 aa47.3■■■■■ 5.16
H2AFY-208ENST00000506218 NCAPD3P42695 1498 aa47.23■■■■■ 5.15
H2AFY-208ENST00000506218 ERCC6Q03468 1493 aa47.16■■■■■ 5.14
H2AFY-208ENST00000506218 ATAD2BQ9ULI0 1458 aa46.94■■■■■ 5.1
H2AFY-208ENST00000506218 SMARCA2P51531 1590 aa46.77■■■■■ 5.08
H2AFY-208ENST00000506218 HMGXB3Q12766 1538 aa46.71■■■■■ 5.07
H2AFY-208ENST00000506218 SMARCA4P51532 1647 aa46.6■■■■■ 5.05
H2AFY-208ENST00000506218 NESP48681 1621 aa46.56■■■■■ 5.04
H2AFY-208ENST00000506218 BAZ1BQ9UIG0 1483 aaKnown RBP46.45■■■■■ 5.03
H2AFY-208ENST00000506218 BAZ1AQ9NRL2 1556 aaPredicted RBP46.38■■■■■ 5.01
H2AFY-208ENST00000506218 PEG3Q9GZU2 1588 aa46.2■■■■■ 4.99
H2AFY-208ENST00000506218 LAMC3Q9Y6N6 1575 aa46.18■■■■■ 4.98
H2AFY-208ENST00000506218 THOC2Q8NI27 1593 aaKnown RBP46.13■■■■■ 4.97
H2AFY-208ENST00000506218 PDS5BQ9NTI5 1447 aa46.09■■■■■ 4.97
H2AFY-208ENST00000506218 MROH2BQ7Z745 1585 aa45.92■■■■■ 4.94
H2AFY-208ENST00000506218 CADPSQ9ULU8 1353 aa45.81■■■■■ 4.92
H2AFY-208ENST00000506218 KIF21AQ7Z4S6 1674 aa45.76■■■■■ 4.92
H2AFY-208ENST00000506218 TRIM41Q8WV44 630 aa45.71■■■■■ 4.91
H2AFY-208ENST00000506218 MRC2Q9UBG0 1479 aa45.61■■■■■ 4.89
H2AFY-208ENST00000506218 WDR62O43379 1518 aa45.46■■■■■ 4.87
H2AFY-208ENST00000506218 CEP164Q9UPV0 1460 aa45.3■■■■■ 4.84
H2AFY-208ENST00000506218 WIZO95785 1651 aa45.29■■■■■ 4.84
H2AFY-208ENST00000506218 FANCD2Q9BXW9 1451 aa45.2■■■■■ 4.83
H2AFY-208ENST00000506218 OSCARQ8IYS5 282 aa45.19■■■■■ 4.82
H2AFY-208ENST00000506218 RSF1Q96T23 1441 aaPredicted RBP45.09■■■■■ 4.81
H2AFY-208ENST00000506218 CFTRP13569 1480 aa45.08■■■■■ 4.81
H2AFY-208ENST00000506218 TOP2AP11388 1531 aaKnown RBP44.8■■■■■ 4.76
H2AFY-208ENST00000506218 URB2Q14146 1524 aaKnown RBP44.8■■■■■ 4.76
H2AFY-208ENST00000506218 IFT140Q96RY7 1462 aa44.47■■■■■ 4.71
H2AFY-208ENST00000506218 ZNF608Q9ULD9 1512 aaPredicted RBP44.36■■■■■ 4.69
H2AFY-208ENST00000506218 RIMBP3CA6NJZ7 1639 aa44.35■■■■■ 4.69
H2AFY-208ENST00000506218 RIMBP3BA6NNM3 1639 aa44.35■■■■■ 4.69
H2AFY-208ENST00000506218 RIMBP3Q9UFD9 1639 aa44.35■■■■■ 4.69
H2AFY-208ENST00000506218 CCDC88BA6NC98 1476 aa44.32■■■■■ 4.69
H2AFY-208ENST00000506218 ARHGEF11O15085 1522 aa44.23■■■■■ 4.67
H2AFY-208ENST00000506218 TOPBP1Q92547 1522 aa44.23■■■■■ 4.67
H2AFY-208ENST00000506218 ABCC8Q09428 1581 aa44.22■■■■■ 4.67
H2AFY-208ENST00000506218 PRDM2Q13029 1718 aa44.2■■■■■ 4.67
H2AFY-208ENST00000506218 CYB5RLQ6IPT4 315 aa44.12■■■■■ 4.65
H2AFY-208ENST00000506218 EIF4G3O43432 1585 aaKnown RBP43.99■■■■■ 4.63
H2AFY-208ENST00000506218 DNMBPQ6XZF7 1577 aa43.98■■■■■ 4.63
H2AFY-208ENST00000506218 AQRO60306 1485 aaKnown RBP eCLIP43.95■■■■■ 4.63
H2AFY-208ENST00000506218 FBLN2P98095 1184 aa43.93■■■■■ 4.62
H2AFY-208ENST00000506218 TRHP20396 242 aaPredicted RBP43.89■■■■■ 4.62
H2AFY-208ENST00000506218 TARBP1Q13395 1621 aaKnown RBP43.79■■■■■ 4.6
H2AFY-208ENST00000506218 POLA1P09884 1462 aaPredicted RBP43.74■■■■■ 4.59
H2AFY-208ENST00000506218 ARAP1Q96P48 1450 aa43.74■■■■■ 4.59
H2AFY-208ENST00000506218 CHD1O14646 1710 aa43.68■■■■■ 4.58
H2AFY-208ENST00000506218 SOGA1O94964 1423 aa43.65■■■■■ 4.58
H2AFY-208ENST00000506218 TDRD9Q8NDG6 1382 aaKnown RBP43.62■■■■■ 4.57
H2AFY-208ENST00000506218 RAD54L2Q9Y4B4 1467 aa43.59■■■■■ 4.57
H2AFY-208ENST00000506218 CHMP7Q8WUX9 453 aaPredicted RBP43.53■■■■■ 4.56
H2AFY-208ENST00000506218 SUPT5HO00267 1087 aaKnown RBP43.44■■■■■ 4.54
H2AFY-208ENST00000506218 SNAPC4Q5SXM2 1469 aa43.44■■■■■ 4.54
H2AFY-208ENST00000506218 WDR97A6NE52 1622 aa43.4■■■■■ 4.54
H2AFY-208ENST00000506218 FGD5Q6ZNL6 1462 aa43.37■■■■■ 4.53
H2AFY-208ENST00000506218 MAGI1Q96QZ7 1491 aaPredicted RBP43.34■■■■■ 4.53
H2AFY-208ENST00000506218 CLASP1Q7Z460 1538 aa43.32■■■■■ 4.53
H2AFY-208ENST00000506218 SYNJ1O43426 1573 aa43.31■■■■■ 4.52
H2AFY-208ENST00000506218 GRIN2BQ13224 1484 aa43.31■■■■■ 4.52
H2AFY-208ENST00000506218 SYNJ2O15056 1496 aa43.22■■■■■ 4.51
H2AFY-208ENST00000506218 CUX1P39880 1505 aa43.17■■■■■ 4.5
H2AFY-208ENST00000506218 AEBP2Q6ZN18 517 aaPredicted RBP43.14■■■■■ 4.5
H2AFY-208ENST00000506218 GAPVD1Q14C86 1478 aa43.05■■■■■ 4.48
H2AFY-208ENST00000506218 ABCA10Q8WWZ4 1543 aa42.87■■■■■ 4.45
H2AFY-208ENST00000506218 PBRM1Q86U86 1689 aa42.79■■■■■ 4.44
H2AFY-208ENST00000506218 ABCA5Q8WWZ7 1642 aa42.72■■■■■ 4.43
H2AFY-208ENST00000506218 GRIN2AQ12879 1464 aa42.68■■■■■ 4.42
H2AFY-208ENST00000506218 WRNQ14191 1432 aaPredicted RBP eCLIP42.67■■■■■ 4.42
H2AFY-208ENST00000506218 NUP160Q12769 1436 aa42.59■■■■■ 4.41
H2AFY-208ENST00000506218 ERCC6L2Q5T890 1561 aa42.55■■■■■ 4.4
H2AFY-208ENST00000506218 FHAD1B1AJZ9 1412 aa42.52■■■■■ 4.4
H2AFY-208ENST00000506218 CEP170Q5SW79 1584 aa42.52■■■■■ 4.4
H2AFY-208ENST00000506218 TOP2BQ02880 1626 aa42.49■■■■■ 4.39
H2AFY-208ENST00000506218 ADAMTS12P58397 1594 aa42.47■■■■■ 4.39
H2AFY-208ENST00000506218 BIVM-ERCC5R4GMW8 1640 aa42.45■■■■■ 4.39
H2AFY-208ENST00000506218 SHROOM2Q13796 1616 aa42.34■■■■■ 4.37
H2AFY-208ENST00000506218 ERICH3Q5RHP9 1530 aa42.32■■■■■ 4.37
H2AFY-208ENST00000506218 JPH4Q96JJ6 628 aa42.3■■■■■ 4.36
H2AFY-208ENST00000506218 PRG4Q92954 1404 aaPredicted RBP42.29■■■■■ 4.36
H2AFY-208ENST00000506218 NPM1P06748 294 aaKnown RBP eCLIP42.2■■■■■ 4.35
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms