RNA–Protein interactions for RNA: ENST00000506218.1

H2AFY-208, Transcript of H2A histone family member Y, human

TSL 3

Gene H2AFY, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
H2AFY-208	ENST00000506218	NISCH	Q9Y2I1	1504 aa		59.68	■■■■■ 7.14
H2AFY-208	ENST00000506218	ABCC9	O60706	1549 aa		54.48	■■■■■ 6.31
H2AFY-208	ENST00000506218	CCDC180	Q9P1Z9	1646 aa		53.69	■■■■■ 6.19
H2AFY-208	ENST00000506218	DNAJC5B	Q9UF47	199 aa		51.74	■■■■■ 5.87
H2AFY-208	ENST00000506218	RB1CC1	Q8TDY2	1594 aa		51.57	■■■■■ 5.85
H2AFY-208	ENST00000506218	NACAD	O15069	1562 aa		51.07	■■■■■ 5.77
H2AFY-208	ENST00000506218	DCAF8L2	P0C7V8	631 aa		50.87	■■■■■ 5.73
H2AFY-208	ENST00000506218	PABPN1	Q86U42	306 aa	Known RBP eCLIP	50.72	■■■■■ 5.71
H2AFY-208	ENST00000506218	MYO15B	Q96JP2	1530 aa		50.21	■■■■■ 5.63
H2AFY-208	ENST00000506218	UNC13A	Q9UPW8	1703 aa		50.02	■■■■■ 5.6
H2AFY-208	ENST00000506218	BICRA	Q9NZM4	1560 aa		49.96	■■■■■ 5.59
H2AFY-208	ENST00000506218	SHROOM4	Q9ULL8	1493 aa		49.43	■■■■■ 5.5
H2AFY-208	ENST00000506218	ZCCHC6	Q5VYS8	1495 aa	Known RBP	49.41	■■■■■ 5.5
H2AFY-208	ENST00000506218	DCAF1	Q9Y4B6	1507 aa		49.29	■■■■■ 5.48
H2AFY-208	ENST00000506218	CECR2	Q9BXF3	1484 aa		49.2	■■■■■ 5.47
H2AFY-208	ENST00000506218	CC2D2A	Q9P2K1	1620 aa		49.09	■■■■■ 5.45
H2AFY-208	ENST00000506218	SCRIB	Q14160	1630 aa		48.9	■■■■■ 5.42
H2AFY-208	ENST00000506218	EIF4G1	Q04637	1599 aa	Known RBP	48.87	■■■■■ 5.41
H2AFY-208	ENST00000506218	DNAJC5	Q9H3Z4	198 aa		48.13	■■■■■ 5.3
H2AFY-208	ENST00000506218	CUX2	O14529	1486 aa		47.3	■■■■■ 5.16
H2AFY-208	ENST00000506218	NCAPD3	P42695	1498 aa		47.23	■■■■■ 5.15
H2AFY-208	ENST00000506218	ERCC6	Q03468	1493 aa		47.16	■■■■■ 5.14
H2AFY-208	ENST00000506218	ATAD2B	Q9ULI0	1458 aa		46.94	■■■■■ 5.1
H2AFY-208	ENST00000506218	SMARCA2	P51531	1590 aa		46.77	■■■■■ 5.08
H2AFY-208	ENST00000506218	HMGXB3	Q12766	1538 aa		46.71	■■■■■ 5.07
H2AFY-208	ENST00000506218	SMARCA4	P51532	1647 aa		46.6	■■■■■ 5.05
H2AFY-208	ENST00000506218	NES	P48681	1621 aa		46.56	■■■■■ 5.04
H2AFY-208	ENST00000506218	BAZ1B	Q9UIG0	1483 aa	Known RBP	46.45	■■■■■ 5.03
H2AFY-208	ENST00000506218	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	46.38	■■■■■ 5.01
H2AFY-208	ENST00000506218	PEG3	Q9GZU2	1588 aa		46.2	■■■■■ 4.99
H2AFY-208	ENST00000506218	LAMC3	Q9Y6N6	1575 aa		46.18	■■■■■ 4.98
H2AFY-208	ENST00000506218	THOC2	Q8NI27	1593 aa	Known RBP	46.13	■■■■■ 4.97
H2AFY-208	ENST00000506218	PDS5B	Q9NTI5	1447 aa		46.09	■■■■■ 4.97
H2AFY-208	ENST00000506218	MROH2B	Q7Z745	1585 aa		45.92	■■■■■ 4.94
H2AFY-208	ENST00000506218	CADPS	Q9ULU8	1353 aa		45.81	■■■■■ 4.92
H2AFY-208	ENST00000506218	KIF21A	Q7Z4S6	1674 aa		45.76	■■■■■ 4.92
H2AFY-208	ENST00000506218	TRIM41	Q8WV44	630 aa		45.71	■■■■■ 4.91
H2AFY-208	ENST00000506218	MRC2	Q9UBG0	1479 aa		45.61	■■■■■ 4.89
H2AFY-208	ENST00000506218	WDR62	O43379	1518 aa		45.46	■■■■■ 4.87
H2AFY-208	ENST00000506218	CEP164	Q9UPV0	1460 aa		45.3	■■■■■ 4.84
H2AFY-208	ENST00000506218	WIZ	O95785	1651 aa		45.29	■■■■■ 4.84
H2AFY-208	ENST00000506218	FANCD2	Q9BXW9	1451 aa		45.2	■■■■■ 4.83
H2AFY-208	ENST00000506218	OSCAR	Q8IYS5	282 aa		45.19	■■■■■ 4.82
H2AFY-208	ENST00000506218	RSF1	Q96T23	1441 aa	Predicted RBP	45.09	■■■■■ 4.81
H2AFY-208	ENST00000506218	CFTR	P13569	1480 aa		45.08	■■■■■ 4.81
H2AFY-208	ENST00000506218	TOP2A	P11388	1531 aa	Known RBP	44.8	■■■■■ 4.76
H2AFY-208	ENST00000506218	URB2	Q14146	1524 aa	Known RBP	44.8	■■■■■ 4.76
H2AFY-208	ENST00000506218	IFT140	Q96RY7	1462 aa		44.47	■■■■■ 4.71
H2AFY-208	ENST00000506218	ZNF608	Q9ULD9	1512 aa	Predicted RBP	44.36	■■■■■ 4.69
H2AFY-208	ENST00000506218	RIMBP3C	A6NJZ7	1639 aa		44.35	■■■■■ 4.69
H2AFY-208	ENST00000506218	RIMBP3B	A6NNM3	1639 aa		44.35	■■■■■ 4.69
H2AFY-208	ENST00000506218	RIMBP3	Q9UFD9	1639 aa		44.35	■■■■■ 4.69
H2AFY-208	ENST00000506218	CCDC88B	A6NC98	1476 aa		44.32	■■■■■ 4.69
H2AFY-208	ENST00000506218	ARHGEF11	O15085	1522 aa		44.23	■■■■■ 4.67
H2AFY-208	ENST00000506218	TOPBP1	Q92547	1522 aa		44.23	■■■■■ 4.67
H2AFY-208	ENST00000506218	ABCC8	Q09428	1581 aa		44.22	■■■■■ 4.67
H2AFY-208	ENST00000506218	PRDM2	Q13029	1718 aa		44.2	■■■■■ 4.67
H2AFY-208	ENST00000506218	CYB5RL	Q6IPT4	315 aa		44.12	■■■■■ 4.65
H2AFY-208	ENST00000506218	EIF4G3	O43432	1585 aa	Known RBP	43.99	■■■■■ 4.63
H2AFY-208	ENST00000506218	DNMBP	Q6XZF7	1577 aa		43.98	■■■■■ 4.63
H2AFY-208	ENST00000506218	AQR	O60306	1485 aa	Known RBP eCLIP	43.95	■■■■■ 4.63
H2AFY-208	ENST00000506218	FBLN2	P98095	1184 aa		43.93	■■■■■ 4.62
H2AFY-208	ENST00000506218	TRH	P20396	242 aa	Predicted RBP	43.89	■■■■■ 4.62
H2AFY-208	ENST00000506218	TARBP1	Q13395	1621 aa	Known RBP	43.79	■■■■■ 4.6
H2AFY-208	ENST00000506218	POLA1	P09884	1462 aa	Predicted RBP	43.74	■■■■■ 4.59
H2AFY-208	ENST00000506218	ARAP1	Q96P48	1450 aa		43.74	■■■■■ 4.59
H2AFY-208	ENST00000506218	CHD1	O14646	1710 aa		43.68	■■■■■ 4.58
H2AFY-208	ENST00000506218	SOGA1	O94964	1423 aa		43.65	■■■■■ 4.58
H2AFY-208	ENST00000506218	TDRD9	Q8NDG6	1382 aa	Known RBP	43.62	■■■■■ 4.57
H2AFY-208	ENST00000506218	RAD54L2	Q9Y4B4	1467 aa		43.59	■■■■■ 4.57
H2AFY-208	ENST00000506218	CHMP7	Q8WUX9	453 aa	Predicted RBP	43.53	■■■■■ 4.56
H2AFY-208	ENST00000506218	SUPT5H	O00267	1087 aa	Known RBP	43.44	■■■■■ 4.54
H2AFY-208	ENST00000506218	SNAPC4	Q5SXM2	1469 aa		43.44	■■■■■ 4.54
H2AFY-208	ENST00000506218	WDR97	A6NE52	1622 aa		43.4	■■■■■ 4.54
H2AFY-208	ENST00000506218	FGD5	Q6ZNL6	1462 aa		43.37	■■■■■ 4.53
H2AFY-208	ENST00000506218	MAGI1	Q96QZ7	1491 aa	Predicted RBP	43.34	■■■■■ 4.53
H2AFY-208	ENST00000506218	CLASP1	Q7Z460	1538 aa		43.32	■■■■■ 4.53
H2AFY-208	ENST00000506218	SYNJ1	O43426	1573 aa		43.31	■■■■■ 4.52
H2AFY-208	ENST00000506218	GRIN2B	Q13224	1484 aa		43.31	■■■■■ 4.52
H2AFY-208	ENST00000506218	SYNJ2	O15056	1496 aa		43.22	■■■■■ 4.51
H2AFY-208	ENST00000506218	CUX1	P39880	1505 aa		43.17	■■■■■ 4.5
H2AFY-208	ENST00000506218	AEBP2	Q6ZN18	517 aa	Predicted RBP	43.14	■■■■■ 4.5
H2AFY-208	ENST00000506218	GAPVD1	Q14C86	1478 aa		43.05	■■■■■ 4.48
H2AFY-208	ENST00000506218	ABCA10	Q8WWZ4	1543 aa		42.87	■■■■■ 4.45
H2AFY-208	ENST00000506218	PBRM1	Q86U86	1689 aa		42.79	■■■■■ 4.44
H2AFY-208	ENST00000506218	ABCA5	Q8WWZ7	1642 aa		42.72	■■■■■ 4.43
H2AFY-208	ENST00000506218	GRIN2A	Q12879	1464 aa		42.68	■■■■■ 4.42
H2AFY-208	ENST00000506218	WRN	Q14191	1432 aa	Predicted RBP eCLIP	42.67	■■■■■ 4.42
H2AFY-208	ENST00000506218	NUP160	Q12769	1436 aa		42.59	■■■■■ 4.41
H2AFY-208	ENST00000506218	ERCC6L2	Q5T890	1561 aa		42.55	■■■■■ 4.4
H2AFY-208	ENST00000506218	FHAD1	B1AJZ9	1412 aa		42.52	■■■■■ 4.4
H2AFY-208	ENST00000506218	CEP170	Q5SW79	1584 aa		42.52	■■■■■ 4.4
H2AFY-208	ENST00000506218	TOP2B	Q02880	1626 aa		42.49	■■■■■ 4.39
H2AFY-208	ENST00000506218	ADAMTS12	P58397	1594 aa		42.47	■■■■■ 4.39
H2AFY-208	ENST00000506218	BIVM-ERCC5	R4GMW8	1640 aa		42.45	■■■■■ 4.39
H2AFY-208	ENST00000506218	SHROOM2	Q13796	1616 aa		42.34	■■■■■ 4.37
H2AFY-208	ENST00000506218	ERICH3	Q5RHP9	1530 aa		42.32	■■■■■ 4.37
H2AFY-208	ENST00000506218	JPH4	Q96JJ6	628 aa		42.3	■■■■■ 4.36
H2AFY-208	ENST00000506218	PRG4	Q92954	1404 aa	Predicted RBP	42.29	■■■■■ 4.36
H2AFY-208	ENST00000506218	NPM1	P06748	294 aa	Known RBP eCLIP	42.2	■■■■■ 4.35

Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms