RNA–Protein interactions for RNA: ENST00000368521.9

C1orf43-206, Transcript of chromosome 1 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1orf43, Length 1,708 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-206ENST00000368521 NISCHQ9Y2I1 1504 aa32.28■■■□□ 2.76
C1orf43-206ENST00000368521 CCDC180Q9P1Z9 1646 aa27.85■■■□□ 2.05
C1orf43-206ENST00000368521 ZCCHC6Q5VYS8 1495 aaKnown RBP27.25■■□□□ 1.95
C1orf43-206ENST00000368521 DCAF1Q9Y4B6 1507 aa26.81■■□□□ 1.88
C1orf43-206ENST00000368521 SHROOM4Q9ULL8 1493 aa26.55■■□□□ 1.84
C1orf43-206ENST00000368521 MYO15BQ96JP2 1530 aa26.28■■□□□ 1.8
C1orf43-206ENST00000368521 DCAF8L2P0C7V8 631 aa26.23■■□□□ 1.79
C1orf43-206ENST00000368521 SUPT5HO00267 1087 aaKnown RBP25.91■■□□□ 1.74
C1orf43-206ENST00000368521 NACADO15069 1562 aa25.82■■□□□ 1.72
C1orf43-206ENST00000368521 ABCC9O60706 1549 aa25.81■■□□□ 1.72
C1orf43-206ENST00000368521 SCRIBQ14160 1630 aa25.55■■□□□ 1.68
C1orf43-206ENST00000368521 RB1CC1Q8TDY2 1594 aa25.39■■□□□ 1.66
C1orf43-206ENST00000368521 RSF1Q96T23 1441 aaPredicted RBP25.28■■□□□ 1.64
C1orf43-206ENST00000368521 CHIC1Q5VXU3 224 aa25.27■■□□□ 1.64
C1orf43-206ENST00000368521 CECR2Q9BXF3 1484 aa24.95■■□□□ 1.58
C1orf43-206ENST00000368521 MROH2BQ7Z745 1585 aa24.9■■□□□ 1.58
C1orf43-206ENST00000368521 BAZ1AQ9NRL2 1556 aaPredicted RBP24.87■■□□□ 1.57
C1orf43-206ENST00000368521 UNC13AQ9UPW8 1703 aa24.81■■□□□ 1.56
C1orf43-206ENST00000368521 WIZO95785 1651 aa24.68■■□□□ 1.54
C1orf43-206ENST00000368521 SMARCA4P51532 1647 aa24.64■■□□□ 1.53
C1orf43-206ENST00000368521 BICRAQ9NZM4 1560 aa24.6■■□□□ 1.53
C1orf43-206ENST00000368521 TOP2AP11388 1531 aaKnown RBP24.54■■□□□ 1.52
C1orf43-206ENST00000368521 PEG3Q9GZU2 1588 aa24.41■■□□□ 1.5
C1orf43-206ENST00000368521 TRIM41Q8WV44 630 aa24.41■■□□□ 1.5
C1orf43-206ENST00000368521 EIF4G1Q04637 1599 aaKnown RBP24.39■■□□□ 1.5
C1orf43-206ENST00000368521 SMARCA2P51531 1590 aa24.3■■□□□ 1.48
C1orf43-206ENST00000368521 CCDC88BA6NC98 1476 aa24.28■■□□□ 1.48
C1orf43-206ENST00000368521 PABPN1Q86U42 306 aaKnown RBP eCLIP24.27■■□□□ 1.48
C1orf43-206ENST00000368521 LOC105371045A0A1W2PR82 267 aa24.21■■□□□ 1.47
C1orf43-206ENST00000368521 ATAD2BQ9ULI0 1458 aa24.11■■□□□ 1.45
C1orf43-206ENST00000368521 BAZ1BQ9UIG0 1483 aaKnown RBP23.97■■□□□ 1.43
C1orf43-206ENST00000368521 ABCC8Q09428 1581 aa23.87■■□□□ 1.41
C1orf43-206ENST00000368521 EEA1Q15075 1411 aa23.86■■□□□ 1.41
C1orf43-206ENST00000368521 NCAPD3P42695 1498 aa23.85■■□□□ 1.41
C1orf43-206ENST00000368521 HMGXB3Q12766 1538 aa23.85■■□□□ 1.41
C1orf43-206ENST00000368521 FAM9AQ8IZU1 332 aaPredicted RBP23.84■■□□□ 1.41
C1orf43-206ENST00000368521 PCGF6Q9BYE7 350 aa23.79■■□□□ 1.4
C1orf43-206ENST00000368521 TRIM26Q12899 539 aaPredicted RBP23.76■■□□□ 1.39
C1orf43-206ENST00000368521 WRNQ14191 1432 aaPredicted RBP eCLIP23.75■■□□□ 1.39
C1orf43-206ENST00000368521 HRCP23327 699 aa23.74■■□□□ 1.39
C1orf43-206ENST00000368521 SOGA1O94964 1423 aa23.62■■□□□ 1.37
C1orf43-206ENST00000368521 SYNJ1O43426 1573 aa23.58■■□□□ 1.37
C1orf43-206ENST00000368521 CSRNP3Q8WYN3 585 aa23.58■■□□□ 1.37
C1orf43-206ENST00000368521 TNIKQ9UKE5 1360 aa23.56■■□□□ 1.36
C1orf43-206ENST00000368521 DNAJC5BQ9UF47 199 aa23.53■■□□□ 1.36
C1orf43-206ENST00000368521 TOP2BQ02880 1626 aa23.5■■□□□ 1.35
C1orf43-206ENST00000368521 CFTRP13569 1480 aa23.47■■□□□ 1.35
C1orf43-206ENST00000368521 BIVM-ERCC5R4GMW8 1640 aa23.46■■□□□ 1.35
C1orf43-206ENST00000368521 GOLGA3Q08378 1498 aa23.46■■□□□ 1.35
C1orf43-206ENST00000368521 RUSC2Q8N2Y8 1516 aa23.45■■□□□ 1.34
C1orf43-206ENST00000368521 KIF21BO75037 1637 aa23.44■■□□□ 1.34
C1orf43-206ENST00000368521 CEP164Q9UPV0 1460 aa23.42■■□□□ 1.34
C1orf43-206ENST00000368521 CEP162Q5TB80 1403 aa23.4■■□□□ 1.34
C1orf43-206ENST00000368521 EHMT2Q96KQ7 1210 aa23.35■■□□□ 1.33
C1orf43-206ENST00000368521 PRDM2Q13029 1718 aa23.32■■□□□ 1.32
C1orf43-206ENST00000368521 CC2D2AQ9P2K1 1620 aa23.3■■□□□ 1.32
C1orf43-206ENST00000368521 CUX1P39880 1505 aa23.25■■□□□ 1.31
C1orf43-206ENST00000368521 CADPSQ9ULU8 1353 aa23.24■■□□□ 1.31
C1orf43-206ENST00000368521 UBTFP17480 764 aaKnown RBP23.23■■□□□ 1.31
C1orf43-206ENST00000368521 ZEB1P37275 1124 aaPredicted RBP23.22■■□□□ 1.31
C1orf43-206ENST00000368521 ERICH3Q5RHP9 1530 aa23.2■■□□□ 1.3
C1orf43-206ENST00000368521 PRXQ9BXM0 1461 aa23.15■■□□□ 1.3
C1orf43-206ENST00000368521 KIF27Q86VH2 1401 aa23.12■■□□□ 1.29
C1orf43-206ENST00000368521 RAPGEF2Q9Y4G8 1499 aa23.12■■□□□ 1.29
C1orf43-206ENST00000368521 CLIP1P30622 1438 aa23.09■■□□□ 1.29
C1orf43-206ENST00000368521 VPS8Q8N3P4 1428 aa23.01■■□□□ 1.27
C1orf43-206ENST00000368521 FANCD2Q9BXW9 1451 aa22.94■■□□□ 1.26
C1orf43-206ENST00000368521 PPARGC1BQ86YN6 1023 aaKnown RBP22.91■■□□□ 1.26
C1orf43-206ENST00000368521 LAMC3Q9Y6N6 1575 aa22.89■■□□□ 1.25
C1orf43-206ENST00000368521 FGD5Q6ZNL6 1462 aa22.88■■□□□ 1.25
C1orf43-206ENST00000368521 DNMBPQ6XZF7 1577 aa22.87■■□□□ 1.25
C1orf43-206ENST00000368521 IGF1RP08069 1367 aa22.86■■□□□ 1.25
C1orf43-206ENST00000368521 CUX2O14529 1486 aa22.85■■□□□ 1.25
C1orf43-206ENST00000368521 ABCA10Q8WWZ4 1543 aa22.77■■□□□ 1.24
C1orf43-206ENST00000368521 TOPBP1Q92547 1522 aa22.77■■□□□ 1.24
C1orf43-206ENST00000368521 ARAP1Q96P48 1450 aa22.77■■□□□ 1.24
C1orf43-206ENST00000368521 APLP2Q06481 763 aa22.74■■□□□ 1.23
C1orf43-206ENST00000368521 CARMIL1Q5VZK9 1371 aa22.73■■□□□ 1.23
C1orf43-206ENST00000368521 POLA1P09884 1462 aaPredicted RBP22.71■■□□□ 1.23
C1orf43-206ENST00000368521 NESP48681 1621 aa22.7■■□□□ 1.22
C1orf43-206ENST00000368521 PDS5BQ9NTI5 1447 aa22.69■■□□□ 1.22
C1orf43-206ENST00000368521 ARHGAP35Q9NRY4 1499 aa22.66■■□□□ 1.22
C1orf43-206ENST00000368521 CCER1Q8TC90 406 aaPredicted RBP22.62■■□□□ 1.21
C1orf43-206ENST00000368521 CUL7Q14999 1698 aa22.61■■□□□ 1.21
C1orf43-206ENST00000368521 URB2Q14146 1524 aaKnown RBP22.61■■□□□ 1.21
C1orf43-206ENST00000368521 MAP3K1Q13233 1512 aa22.6■■□□□ 1.21
C1orf43-206ENST00000368521 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.59■■□□□ 1.21
C1orf43-206ENST00000368521 WDR97A6NE52 1622 aa22.58■■□□□ 1.21
C1orf43-206ENST00000368521 RAD54L2Q9Y4B4 1467 aa22.58■■□□□ 1.21
C1orf43-206ENST00000368521 TTBK1Q5TCY1 1321 aaPredicted RBP22.55■■□□□ 1.2
C1orf43-206ENST00000368521 RANGAP1P46060 587 aaPredicted RBP22.5■■□□□ 1.19
C1orf43-206ENST00000368521 ABCA5Q8WWZ7 1642 aa22.5■■□□□ 1.19
C1orf43-206ENST00000368521 EFCAB5A4FU69 1503 aa22.48■■□□□ 1.19
C1orf43-206ENST00000368521 FHAD1B1AJZ9 1412 aa22.47■■□□□ 1.19
C1orf43-206ENST00000368521 RRBP1Q9P2E9 1410 aaKnown RBP22.47■■□□□ 1.19
C1orf43-206ENST00000368521 KIF21AQ7Z4S6 1674 aa22.43■■□□□ 1.18
C1orf43-206ENST00000368521 KANK4Q5T7N3 995 aaPredicted RBP22.4■■□□□ 1.18
C1orf43-206ENST00000368521 AQRO60306 1485 aaKnown RBP eCLIP22.4■■□□□ 1.183e-6■■■□□ 18.5
C1orf43-206ENST00000368521 GAPVD1Q14C86 1478 aa22.4■■□□□ 1.18
C1orf43-206ENST00000368521 TIAM1Q13009 1591 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms