RNA–Protein interactions for RNA: ENST00000368519.5

C1orf43-205, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 2 BASIC

Gene C1orf43, Length 1,163 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-205ENST00000368519 NISCHQ9Y2I1 1504 aa36.08■■■■□ 3.37
C1orf43-205ENST00000368519 CCDC180Q9P1Z9 1646 aa32.2■■■□□ 2.75
C1orf43-205ENST00000368519 ABCC9O60706 1549 aa31.77■■■□□ 2.68
C1orf43-205ENST00000368519 RB1CC1Q8TDY2 1594 aa30.41■■■□□ 2.46
C1orf43-205ENST00000368519 NACADO15069 1562 aa30.32■■■□□ 2.44
C1orf43-205ENST00000368519 DCAF8L2P0C7V8 631 aa30.14■■■□□ 2.42
C1orf43-205ENST00000368519 MYO15BQ96JP2 1530 aa30.06■■■□□ 2.4
C1orf43-205ENST00000368519 ZCCHC6Q5VYS8 1495 aaKnown RBP30.01■■■□□ 2.4
C1orf43-205ENST00000368519 UNC13AQ9UPW8 1703 aa29.86■■■□□ 2.37
C1orf43-205ENST00000368519 DCAF1Q9Y4B6 1507 aa29.83■■■□□ 2.37
C1orf43-205ENST00000368519 PABPN1Q86U42 306 aaKnown RBP eCLIP29.64■■■□□ 2.34
C1orf43-205ENST00000368519 BICRAQ9NZM4 1560 aa29.61■■■□□ 2.33
C1orf43-205ENST00000368519 DNAJC5BQ9UF47 199 aa29.51■■■□□ 2.31
C1orf43-205ENST00000368519 SCRIBQ14160 1630 aa29.36■■■□□ 2.29
C1orf43-205ENST00000368519 SHROOM4Q9ULL8 1493 aa29.16■■■□□ 2.26
C1orf43-205ENST00000368519 EIF4G1Q04637 1599 aaKnown RBP28.79■■■□□ 2.2
C1orf43-205ENST00000368519 CC2D2AQ9P2K1 1620 aa28.76■■■□□ 2.2
C1orf43-205ENST00000368519 CECR2Q9BXF3 1484 aa28.57■■■□□ 2.16
C1orf43-205ENST00000368519 SMARCA4P51532 1647 aa28.07■■■□□ 2.08
C1orf43-205ENST00000368519 NCAPD3P42695 1498 aa28■■■□□ 2.07
C1orf43-205ENST00000368519 ATAD2BQ9ULI0 1458 aa27.98■■■□□ 2.07
C1orf43-205ENST00000368519 BAZ1AQ9NRL2 1556 aaPredicted RBP27.94■■■□□ 2.06
C1orf43-205ENST00000368519 SMARCA2P51531 1590 aa27.89■■■□□ 2.05
C1orf43-205ENST00000368519 HMGXB3Q12766 1538 aa27.83■■■□□ 2.05
C1orf43-205ENST00000368519 MROH2BQ7Z745 1585 aa27.83■■■□□ 2.05
C1orf43-205ENST00000368519 PEG3Q9GZU2 1588 aa27.81■■■□□ 2.04
C1orf43-205ENST00000368519 BAZ1BQ9UIG0 1483 aaKnown RBP27.69■■■□□ 2.02
C1orf43-205ENST00000368519 RSF1Q96T23 1441 aaPredicted RBP27.58■■■□□ 2.01
C1orf43-205ENST00000368519 WIZO95785 1651 aa27.52■■■□□ 2
C1orf43-205ENST00000368519 NESP48681 1621 aa27.46■■□□□ 1.99
C1orf43-205ENST00000368519 ERCC6Q03468 1493 aa27.34■■□□□ 1.97
C1orf43-205ENST00000368519 LAMC3Q9Y6N6 1575 aa27.29■■□□□ 1.96
C1orf43-205ENST00000368519 SUPT5HO00267 1087 aaKnown RBP27.25■■□□□ 1.95
C1orf43-205ENST00000368519 CUX2O14529 1486 aa27.21■■□□□ 1.95
C1orf43-205ENST00000368519 TOP2AP11388 1531 aaKnown RBP27.17■■□□□ 1.94
C1orf43-205ENST00000368519 CADPSQ9ULU8 1353 aa27.15■■□□□ 1.94
C1orf43-205ENST00000368519 KIF21AQ7Z4S6 1674 aa27.13■■□□□ 1.93
C1orf43-205ENST00000368519 THOC2Q8NI27 1593 aaKnown RBP27.12■■□□□ 1.93
C1orf43-205ENST00000368519 PDS5BQ9NTI5 1447 aa27.07■■□□□ 1.92
C1orf43-205ENST00000368519 CFTRP13569 1480 aa26.95■■□□□ 1.91
C1orf43-205ENST00000368519 CCDC88BA6NC98 1476 aa26.86■■□□□ 1.89
C1orf43-205ENST00000368519 MRC2Q9UBG0 1479 aa26.86■■□□□ 1.89
C1orf43-205ENST00000368519 FANCD2Q9BXW9 1451 aa26.83■■□□□ 1.89
C1orf43-205ENST00000368519 WDR62O43379 1518 aa26.81■■□□□ 1.88
C1orf43-205ENST00000368519 CEP164Q9UPV0 1460 aa26.81■■□□□ 1.88
C1orf43-205ENST00000368519 PRDM2Q13029 1718 aa26.76■■□□□ 1.87
C1orf43-205ENST00000368519 DNAJC5Q9H3Z4 198 aa26.72■■□□□ 1.87
C1orf43-205ENST00000368519 URB2Q14146 1524 aaKnown RBP26.64■■□□□ 1.85
C1orf43-205ENST00000368519 TOPBP1Q92547 1522 aa26.4■■□□□ 1.82
C1orf43-205ENST00000368519 DNMBPQ6XZF7 1577 aa26.33■■□□□ 1.81
C1orf43-205ENST00000368519 ABCC8Q09428 1581 aa26.3■■□□□ 1.8
C1orf43-205ENST00000368519 IFT140Q96RY7 1462 aa26.27■■□□□ 1.8
C1orf43-205ENST00000368519 ZNF608Q9ULD9 1512 aaPredicted RBP26.24■■□□□ 1.79
C1orf43-205ENST00000368519 TARBP1Q13395 1621 aaKnown RBP26.17■■□□□ 1.78
C1orf43-205ENST00000368519 POLA1P09884 1462 aaPredicted RBP26.16■■□□□ 1.78
C1orf43-205ENST00000368519 CUX1P39880 1505 aa26.12■■□□□ 1.77
C1orf43-205ENST00000368519 EIF4G3O43432 1585 aaKnown RBP26.1■■□□□ 1.77
C1orf43-205ENST00000368519 RAD54L2Q9Y4B4 1467 aa26.06■■□□□ 1.76
C1orf43-205ENST00000368519 FGD5Q6ZNL6 1462 aa26.04■■□□□ 1.76
C1orf43-205ENST00000368519 AQRO60306 1485 aaKnown RBP eCLIP26.03■■□□□ 1.763e-6■■■□□ 18.5
C1orf43-205ENST00000368519 SOGA1O94964 1423 aa26■■□□□ 1.75
C1orf43-205ENST00000368519 WRNQ14191 1432 aaPredicted RBP eCLIP25.99■■□□□ 1.75
C1orf43-205ENST00000368519 OSCARQ8IYS5 282 aa25.98■■□□□ 1.75
C1orf43-205ENST00000368519 WDR97A6NE52 1622 aa25.91■■□□□ 1.74
C1orf43-205ENST00000368519 TDRD9Q8NDG6 1382 aaKnown RBP25.91■■□□□ 1.74
C1orf43-205ENST00000368519 CHD1O14646 1710 aa25.86■■□□□ 1.73
C1orf43-205ENST00000368519 TOP2BQ02880 1626 aa25.82■■□□□ 1.72
C1orf43-205ENST00000368519 BIVM-ERCC5R4GMW8 1640 aa25.81■■□□□ 1.72
C1orf43-205ENST00000368519 SYNJ1O43426 1573 aa25.81■■□□□ 1.72
C1orf43-205ENST00000368519 ABCA10Q8WWZ4 1543 aa25.78■■□□□ 1.72
C1orf43-205ENST00000368519 SNAPC4Q5SXM2 1469 aa25.78■■□□□ 1.72
C1orf43-205ENST00000368519 CHIC1Q5VXU3 224 aa25.77■■□□□ 1.72
C1orf43-205ENST00000368519 TRIM41Q8WV44 630 aa25.77■■□□□ 1.72
C1orf43-205ENST00000368519 ABCA5Q8WWZ7 1642 aa25.74■■□□□ 1.71
C1orf43-205ENST00000368519 GRIN2BQ13224 1484 aa25.73■■□□□ 1.71
C1orf43-205ENST00000368519 PBRM1Q86U86 1689 aa25.73■■□□□ 1.71
C1orf43-205ENST00000368519 GAPVD1Q14C86 1478 aa25.71■■□□□ 1.71
C1orf43-205ENST00000368519 MAGI1Q96QZ7 1491 aaPredicted RBP25.7■■□□□ 1.7
C1orf43-205ENST00000368519 RIMBP3CA6NJZ7 1639 aa25.7■■□□□ 1.7
C1orf43-205ENST00000368519 RIMBP3BA6NNM3 1639 aa25.7■■□□□ 1.7
C1orf43-205ENST00000368519 RIMBP3Q9UFD9 1639 aa25.7■■□□□ 1.7
C1orf43-205ENST00000368519 FBLN2P98095 1184 aa25.66■■□□□ 1.7
C1orf43-205ENST00000368519 ARHGEF11O15085 1522 aa25.63■■□□□ 1.69
C1orf43-205ENST00000368519 SYNJ2O15056 1496 aa25.6■■□□□ 1.69
C1orf43-205ENST00000368519 CLASP1Q7Z460 1538 aa25.57■■□□□ 1.68
C1orf43-205ENST00000368519 CHMP7Q8WUX9 453 aaPredicted RBP25.56■■□□□ 1.68
C1orf43-205ENST00000368519 ADAMTS12P58397 1594 aa25.5■■□□□ 1.67
C1orf43-205ENST00000368519 ERICH3Q5RHP9 1530 aa25.44■■□□□ 1.66
C1orf43-205ENST00000368519 ARAP1Q96P48 1450 aa25.44■■□□□ 1.66
C1orf43-205ENST00000368519 KIF27Q86VH2 1401 aa25.43■■□□□ 1.66
C1orf43-205ENST00000368519 GRIN2AQ12879 1464 aa25.42■■□□□ 1.66
C1orf43-205ENST00000368519 FHAD1B1AJZ9 1412 aa25.39■■□□□ 1.66
C1orf43-205ENST00000368519 NUP160Q12769 1436 aa25.36■■□□□ 1.65
C1orf43-205ENST00000368519 CEP170Q5SW79 1584 aa25.35■■□□□ 1.65
C1orf43-205ENST00000368519 CYB5RLQ6IPT4 315 aa25.35■■□□□ 1.65
C1orf43-205ENST00000368519 EEA1Q15075 1411 aa25.3■■□□□ 1.64
C1orf43-205ENST00000368519 RUSC2Q8N2Y8 1516 aa25.28■■□□□ 1.64
C1orf43-205ENST00000368519 IGF1RP08069 1367 aa25.28■■□□□ 1.64
C1orf43-205ENST00000368519 ERCC6L2Q5T890 1561 aa25.23■■□□□ 1.63
C1orf43-205ENST00000368519 SHROOM2Q13796 1616 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms