RNA–Protein interactions for RNA: ENST00000458220.1

GAS5-229, Transcript of growth arrest specific 5, humanhuman

TSL 2

Gene GAS5, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAS5-229ENST00000458220 AEBP2Q6ZN18 517 aaPredicted RBP30.06■■■□□ 2.4
GAS5-229ENST00000458220 CHIC1Q5VXU3 224 aa28.06■■■□□ 2.08
GAS5-229ENST00000458220 SENP3Q9H4L4 574 aaPredicted RBP25.74■■□□□ 1.71
GAS5-229ENST00000458220 PHF23Q9BUL5 403 aaPredicted RBP25.33■■□□□ 1.65
GAS5-229ENST00000458220 FOXD1Q16676 465 aa24.09■■□□□ 1.45
GAS5-229ENST00000458220 POTEDQ86YR6 584 aa23.52■■□□□ 1.36
GAS5-229ENST00000458220 MSH5O43196 834 aa22.82■■□□□ 1.24
GAS5-229ENST00000458220 PIAS4Q8N2W9 510 aaPredicted RBP22.29■■□□□ 1.16
GAS5-229ENST00000458220 PPP6R1Q9UPN7 881 aa21.98■■□□□ 1.11
GAS5-229ENST00000458220 PLPPR3Q6T4P5 718 aa21.9■■□□□ 1.1
GAS5-229ENST00000458220 ADRA2BP18089 450 aa21.83■■□□□ 1.09
GAS5-229ENST00000458220 DMRT2Q9Y5R5 561 aa20.31■□□□□ 0.84
GAS5-229ENST00000458220 MAPK8IP2Q13387 824 aaPredicted RBP20.29■□□□□ 0.84
GAS5-229ENST00000458220 CACNB1Q02641 598 aaPredicted RBP20.01■□□□□ 0.79
GAS5-229ENST00000458220 SCAF1Q9H7N4 1312 aaKnown RBP20.01■□□□□ 0.79
GAS5-229ENST00000458220 DCAF8L1A6NGE4 600 aa19.42■□□□□ 0.7
GAS5-229ENST00000458220 RNF39Q9H2S5 420 aa19.42■□□□□ 0.7
GAS5-229ENST00000458220 HOXD11P31277 338 aaPredicted RBP19.31■□□□□ 0.68
GAS5-229ENST00000458220 C1QBPQ07021 282 aaKnown RBP19.11■□□□□ 0.65
GAS5-229ENST00000458220 PPP4R3CPQ6ZMV5 832 aa19.1■□□□□ 0.65
GAS5-229ENST00000458220 RNF216Q9NWF9 866 aaPredicted RBP18.95■□□□□ 0.62
GAS5-229ENST00000458220 CNKSR2Q8WXI2 1034 aa18.92■□□□□ 0.62
GAS5-229ENST00000458220 DNAJC5BQ9UF47 199 aa18.84■□□□□ 0.61
GAS5-229ENST00000458220 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.32■□□□□ 0.522e-8■□□□□ 9
GAS5-229ENST00000458220 POTEHQ6S545 545 aa18.28■□□□□ 0.52
GAS5-229ENST00000458220 NCBP3Q53F19 620 aaKnown RBP18.14■□□□□ 0.49
GAS5-229ENST00000458220 DSG3P32926 999 aa17.94■□□□□ 0.46
GAS5-229ENST00000458220 NPM3O75607 178 aaKnown RBP17.88■□□□□ 0.45
GAS5-229ENST00000458220 U3KPZ7 1027 aaPredicted RBP17.88■□□□□ 0.45
GAS5-229ENST00000458220 SPINK5Q9NQ38 1064 aaPredicted RBP17.83■□□□□ 0.44
GAS5-229ENST00000458220 CAPN15O75808 1086 aa17.81■□□□□ 0.44
GAS5-229ENST00000458220 TRHP20396 242 aaPredicted RBP17.34■□□□□ 0.37
GAS5-229ENST00000458220 ZNF219Q9P2Y4 722 aaPredicted RBP17.32■□□□□ 0.36
GAS5-229ENST00000458220 ABCB7O75027 752 aa17.31■□□□□ 0.36
GAS5-229ENST00000458220 APLP2Q06481 763 aa17.3■□□□□ 0.36
GAS5-229ENST00000458220 SLC4A2P04920 1241 aa17.28■□□□□ 0.36
GAS5-229ENST00000458220 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.13■□□□□ 0.33
GAS5-229ENST00000458220 HNRNPUL2Q1KMD3 747 aaKnown RBP17.13■□□□□ 0.33
GAS5-229ENST00000458220 RBM42Q9BTD8 480 aaKnown RBP17.11■□□□□ 0.33
GAS5-229ENST00000458220 CHRDL2Q6WN34 429 aa17.03■□□□□ 0.32
GAS5-229ENST00000458220 SAMD1Q6SPF0 538 aaPredicted RBP16.98■□□□□ 0.31
GAS5-229ENST00000458220 KCNA4P22459 653 aa16.87■□□□□ 0.29
GAS5-229ENST00000458220 SP7Q8TDD2 431 aaPredicted RBP16.79■□□□□ 0.28
GAS5-229ENST00000458220 POLA2Q14181 598 aa16.75■□□□□ 0.27
GAS5-229ENST00000458220 AKT1S1Q96B36 256 aa16.58■□□□□ 0.24
GAS5-229ENST00000458220 MYCNP04198 464 aaPredicted RBP16.54■□□□□ 0.24
GAS5-229ENST00000458220 PIP4P2Q8N4L2 257 aa16.47■□□□□ 0.23
GAS5-229ENST00000458220 REM2Q8IYK8 340 aaPredicted RBP16.43■□□□□ 0.22
GAS5-229ENST00000458220 HAX1O00165 279 aa16.36■□□□□ 0.21
GAS5-229ENST00000458220 ZBTB12Q9Y330 459 aaPredicted RBP16.35■□□□□ 0.21
GAS5-229ENST00000458220 FXR2P51116 673 aaKnown RBP eCLIP16.28■□□□□ 0.2
GAS5-229ENST00000458220 PITPNM1O00562 1244 aa16.23■□□□□ 0.19
GAS5-229ENST00000458220 ATF5Q9Y2D1 282 aaPredicted RBP16.23■□□□□ 0.19
GAS5-229ENST00000458220 OSCARQ8IYS5 282 aa16.2■□□□□ 0.18
GAS5-229ENST00000458220 EVX2Q03828 476 aa16.13■□□□□ 0.17
GAS5-229ENST00000458220 FOXD4L1Q9NU39 408 aa15.97■□□□□ 0.15
GAS5-229ENST00000458220 SPDYE2BA6NHP3 402 aa15.8■□□□□ 0.12
GAS5-229ENST00000458220 SPDYE6P0CI01 402 aa15.8■□□□□ 0.12
GAS5-229ENST00000458220 PRKAR2AP13861 404 aaKnown RBP15.8■□□□□ 0.12
GAS5-229ENST00000458220 SPDYE2Q495Y8 402 aa15.8■□□□□ 0.12
GAS5-229ENST00000458220 C19orf67A6NJJ6 358 aa15.79■□□□□ 0.12
GAS5-229ENST00000458220 SLC4A1APQ9BWU0 796 aaKnown RBP15.76■□□□□ 0.11
GAS5-229ENST00000458220 LHX8Q68G74 356 aa15.74■□□□□ 0.11
GAS5-229ENST00000458220 GABBR2O75899 941 aa15.72■□□□□ 0.11
GAS5-229ENST00000458220 SPDYE1Q8NFV5 336 aaPredicted RBP15.69■□□□□ 0.1
GAS5-229ENST00000458220 CLEC11AQ9Y240 323 aa15.66■□□□□ 0.1
GAS5-229ENST00000458220 FBLN2P98095 1184 aa15.62■□□□□ 0.09
GAS5-229ENST00000458220 ATXN8OSP0DMR3 200 aa15.61■□□□□ 0.09
GAS5-229ENST00000458220 SSUH2Q9Y2M2 353 aa15.52■□□□□ 0.08
GAS5-229ENST00000458220 ZBTB22O15209 634 aa15.5■□□□□ 0.07
GAS5-229ENST00000458220 ZNF692Q9BU19 519 aaPredicted RBP15.48■□□□□ 0.07
GAS5-229ENST00000458220 CHADLQ6NUI6 762 aa15.46■□□□□ 0.07
GAS5-229ENST00000458220 MKRN4PQ13434 485 aaPredicted RBP15.45■□□□□ 0.06
GAS5-229ENST00000458220 POTEIP0CG38 1075 aa15.4■□□□□ 0.06
GAS5-229ENST00000458220 PRR29P0C7W0 189 aa15.33■□□□□ 0.04
GAS5-229ENST00000458220 CLCN6P51797 869 aa15.27■□□□□ 0.04
GAS5-229ENST00000458220 PLSCR2Q9NRY7 297 aa15.27■□□□□ 0.04
GAS5-229ENST00000458220 CD44P16070 742 aaKnown RBP15.25■□□□□ 0.03
GAS5-229ENST00000458220 PABPN1Q86U42 306 aaKnown RBP eCLIP15.22■□□□□ 0.03
GAS5-229ENST00000458220 FARP1Q9Y4F1 1045 aaPredicted RBP15.19■□□□□ 0.02
GAS5-229ENST00000458220 DCBLD2Q96PD2 775 aa15.11■□□□□ 0.01
GAS5-229ENST00000458220 ZNF579Q8NAF0 562 aaKnown RBP15.01□□□□□ -0.01
GAS5-229ENST00000458220 OTUD5Q96G74 571 aa14.96□□□□□ -0.01
GAS5-229ENST00000458220 ZRANB1Q9UGI0 708 aa14.92□□□□□ -0.02
GAS5-229ENST00000458220 POTEB2H3BUK9 544 aa14.87□□□□□ -0.03
GAS5-229ENST00000458220 GALR2O43603 387 aaPredicted RBP14.85□□□□□ -0.03
GAS5-229ENST00000458220 POTEMA6NI47 508 aa14.84□□□□□ -0.03
GAS5-229ENST00000458220 CREBZFQ9NS37 354 aa14.8□□□□□ -0.04
GAS5-229ENST00000458220 POTEGQ6S5H5 508 aa14.78□□□□□ -0.04
GAS5-229ENST00000458220 PCDH10Q9P2E7 1040 aa14.71□□□□□ -0.05
GAS5-229ENST00000458220 STAG3Q9UJ98 1225 aa14.68□□□□□ -0.06
GAS5-229ENST00000458220 PELP1Q8IZL8 1130 aaKnown RBP14.67□□□□□ -0.06
GAS5-229ENST00000458220 PHF12Q96QT6 1004 aa14.64□□□□□ -0.07
GAS5-229ENST00000458220 PAK3O75914 559 aaPredicted RBP14.62□□□□□ -0.07
GAS5-229ENST00000458220 POTEJP0CG39 1038 aa14.55□□□□□ -0.08
GAS5-229ENST00000458220 ASTLQ6HA08 431 aaPredicted RBP14.54□□□□□ -0.08
GAS5-229ENST00000458220 METRNQ9UJH8 293 aa14.52□□□□□ -0.09
GAS5-229ENST00000458220 C7P10643 843 aa14.51□□□□□ -0.09
GAS5-229ENST00000458220 NPM1P06748 294 aaKnown RBP eCLIP14.49□□□□□ -0.091e-27■■□□□ 12.8
GAS5-229ENST00000458220 MAMSTRQ6ZN01 415 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms