RNA–Protein interactions for RNA: ENST00000456812.6

GAS5-228, Transcript of growth arrest specific 5, humanhuman

TSL 3

Gene GAS5, Length 723 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAS5-228ENST00000456812 AEBP2Q6ZN18 517 aaPredicted RBP18.68■□□□□ 0.58
GAS5-228ENST00000456812 CHIC1Q5VXU3 224 aa18.28■□□□□ 0.52
GAS5-228ENST00000456812 NISCHQ9Y2I1 1504 aa16.87■□□□□ 0.29
GAS5-228ENST00000456812 PHF23Q9BUL5 403 aaPredicted RBP16.12■□□□□ 0.17
GAS5-228ENST00000456812 SENP3Q9H4L4 574 aaPredicted RBP15.81■□□□□ 0.12
GAS5-228ENST00000456812 CCDC180Q9P1Z9 1646 aa14.99□□□□□ -0.01
GAS5-228ENST00000456812 PLPPR3Q6T4P5 718 aa14.87□□□□□ -0.03
GAS5-228ENST00000456812 ABCC9O60706 1549 aa14.71□□□□□ -0.06
GAS5-228ENST00000456812 FOXD1Q16676 465 aa14.69□□□□□ -0.06
GAS5-228ENST00000456812 PPP6R1Q9UPN7 881 aa14.22□□□□□ -0.13
GAS5-228ENST00000456812 ADRA2BP18089 450 aa14.21□□□□□ -0.13
GAS5-228ENST00000456812 ZCCHC6Q5VYS8 1495 aaKnown RBP14.12□□□□□ -0.15
GAS5-228ENST00000456812 RB1CC1Q8TDY2 1594 aa14.05□□□□□ -0.16
GAS5-228ENST00000456812 DCAF8L2P0C7V8 631 aa14.03□□□□□ -0.16
GAS5-228ENST00000456812 NACADO15069 1562 aa14.01□□□□□ -0.17
GAS5-228ENST00000456812 UNC13AQ9UPW8 1703 aa13.92□□□□□ -0.18
GAS5-228ENST00000456812 MYO15BQ96JP2 1530 aa13.88□□□□□ -0.19
GAS5-228ENST00000456812 DCAF1Q9Y4B6 1507 aa13.88□□□□□ -0.19
GAS5-228ENST00000456812 PIAS4Q8N2W9 510 aaPredicted RBP13.86□□□□□ -0.19
GAS5-228ENST00000456812 SCRIBQ14160 1630 aa13.82□□□□□ -0.2
GAS5-228ENST00000456812 BICRAQ9NZM4 1560 aa13.75□□□□□ -0.21
GAS5-228ENST00000456812 PABPN1Q86U42 306 aaKnown RBP eCLIP13.71□□□□□ -0.21
GAS5-228ENST00000456812 SHROOM4Q9ULL8 1493 aa13.49□□□□□ -0.25
GAS5-228ENST00000456812 MSH5O43196 834 aa13.49□□□□□ -0.25
GAS5-228ENST00000456812 DNAJC5BQ9UF47 199 aa13.44□□□□□ -0.26
GAS5-228ENST00000456812 EIF4G1Q04637 1599 aaKnown RBP13.34□□□□□ -0.27
GAS5-228ENST00000456812 CC2D2AQ9P2K1 1620 aa13.29□□□□□ -0.28
GAS5-228ENST00000456812 CECR2Q9BXF3 1484 aa13.23□□□□□ -0.29
GAS5-228ENST00000456812 SMARCA4P51532 1647 aa13.14□□□□□ -0.31
GAS5-228ENST00000456812 PPP4R3CPQ6ZMV5 832 aa13.13□□□□□ -0.31
GAS5-228ENST00000456812 MROH2BQ7Z745 1585 aa13.08□□□□□ -0.32
GAS5-228ENST00000456812 BAZ1AQ9NRL2 1556 aaPredicted RBP13.05□□□□□ -0.32
GAS5-228ENST00000456812 ATAD2BQ9ULI0 1458 aa13□□□□□ -0.33
GAS5-228ENST00000456812 WIZO95785 1651 aa12.98□□□□□ -0.33
GAS5-228ENST00000456812 SCAF1Q9H7N4 1312 aaKnown RBP12.97□□□□□ -0.33
GAS5-228ENST00000456812 PEG3Q9GZU2 1588 aa12.94□□□□□ -0.34
GAS5-228ENST00000456812 SMARCA2P51531 1590 aa12.94□□□□□ -0.34
GAS5-228ENST00000456812 HMGXB3Q12766 1538 aa12.93□□□□□ -0.34
GAS5-228ENST00000456812 NCAPD3P42695 1498 aa12.91□□□□□ -0.34
GAS5-228ENST00000456812 BAZ1BQ9UIG0 1483 aaKnown RBP12.91□□□□□ -0.34
GAS5-228ENST00000456812 MAPK8IP2Q13387 824 aaPredicted RBP12.9□□□□□ -0.34
GAS5-228ENST00000456812 KCNA4P22459 653 aa12.89□□□□□ -0.35
GAS5-228ENST00000456812 RSF1Q96T23 1441 aaPredicted RBP12.88□□□□□ -0.35
GAS5-228ENST00000456812 NCBP3Q53F19 620 aaKnown RBP12.79□□□□□ -0.36
GAS5-228ENST00000456812 NESP48681 1621 aa12.78□□□□□ -0.36
GAS5-228ENST00000456812 TOP2AP11388 1531 aaKnown RBP12.78□□□□□ -0.36
GAS5-228ENST00000456812 CNKSR2Q8WXI2 1034 aa12.74□□□□□ -0.37
GAS5-228ENST00000456812 KIF21AQ7Z4S6 1674 aa12.65□□□□□ -0.38
GAS5-228ENST00000456812 DMRT2Q9Y5R5 561 aa12.63□□□□□ -0.39
GAS5-228ENST00000456812 NPM3O75607 178 aaKnown RBP12.61□□□□□ -0.39
GAS5-228ENST00000456812 LAMC3Q9Y6N6 1575 aa12.6□□□□□ -0.39
GAS5-228ENST00000456812 CCDC88BA6NC98 1476 aa12.6□□□□□ -0.39
GAS5-228ENST00000456812 ERCC6Q03468 1493 aa12.59□□□□□ -0.39
GAS5-228ENST00000456812 SUPT5HO00267 1087 aaKnown RBP12.58□□□□□ -0.4
GAS5-228ENST00000456812 THOC2Q8NI27 1593 aaKnown RBP12.57□□□□□ -0.4
GAS5-228ENST00000456812 CADPSQ9ULU8 1353 aa12.55□□□□□ -0.4
GAS5-228ENST00000456812 PRDM2Q13029 1718 aa12.52□□□□□ -0.41
GAS5-228ENST00000456812 CFTRP13569 1480 aa12.52□□□□□ -0.41
GAS5-228ENST00000456812 FANCD2Q9BXW9 1451 aa12.47□□□□□ -0.41
GAS5-228ENST00000456812 RNF216Q9NWF9 866 aaPredicted RBP12.46□□□□□ -0.41
GAS5-228ENST00000456812 CEP164Q9UPV0 1460 aa12.45□□□□□ -0.42
GAS5-228ENST00000456812 PDS5BQ9NTI5 1447 aa12.45□□□□□ -0.42
GAS5-228ENST00000456812 MRC2Q9UBG0 1479 aa12.43□□□□□ -0.42
GAS5-228ENST00000456812 WDR62O43379 1518 aa12.42□□□□□ -0.42
GAS5-228ENST00000456812 URB2Q14146 1524 aaKnown RBP12.42□□□□□ -0.42
GAS5-228ENST00000456812 HOXD11P31277 338 aaPredicted RBP12.39□□□□□ -0.43
GAS5-228ENST00000456812 CUX2O14529 1486 aa12.39□□□□□ -0.43
GAS5-228ENST00000456812 TOPBP1Q92547 1522 aa12.3□□□□□ -0.44
GAS5-228ENST00000456812 SLC4A1APQ9BWU0 796 aaKnown RBP12.29□□□□□ -0.44
GAS5-228ENST00000456812 DNMBPQ6XZF7 1577 aa12.29□□□□□ -0.44
GAS5-228ENST00000456812 ABCC8Q09428 1581 aa12.28□□□□□ -0.44
GAS5-228ENST00000456812 CUX1P39880 1505 aa12.27□□□□□ -0.44
GAS5-228ENST00000456812 SYNJ1O43426 1573 aa12.23□□□□□ -0.45
GAS5-228ENST00000456812 ZNF608Q9ULD9 1512 aaPredicted RBP12.22□□□□□ -0.45
GAS5-228ENST00000456812 POLA1P09884 1462 aaPredicted RBP12.21□□□□□ -0.45
GAS5-228ENST00000456812 POTEDQ86YR6 584 aa12.21□□□□□ -0.45
GAS5-228ENST00000456812 FGD5Q6ZNL6 1462 aa12.21□□□□□ -0.46
GAS5-228ENST00000456812 RAD54L2Q9Y4B4 1467 aa12.2□□□□□ -0.46
GAS5-228ENST00000456812 TARBP1Q13395 1621 aaKnown RBP12.19□□□□□ -0.46
GAS5-228ENST00000456812 EIF4G3O43432 1585 aaKnown RBP12.19□□□□□ -0.46
GAS5-228ENST00000456812 WDR97A6NE52 1622 aa12.17□□□□□ -0.46
GAS5-228ENST00000456812 BIVM-ERCC5R4GMW8 1640 aa12.15□□□□□ -0.46
GAS5-228ENST00000456812 IFT140Q96RY7 1462 aa12.14□□□□□ -0.47
GAS5-228ENST00000456812 TOP2BQ02880 1626 aa12.13□□□□□ -0.47
GAS5-228ENST00000456812 DCAF8L1A6NGE4 600 aa12.13□□□□□ -0.47
GAS5-228ENST00000456812 WRNQ14191 1432 aaPredicted RBP eCLIP12.12□□□□□ -0.47
GAS5-228ENST00000456812 AQRO60306 1485 aaKnown RBP eCLIP12.09□□□□□ -0.472e-21■■■■■ 42.2
GAS5-228ENST00000456812 SOGA1O94964 1423 aa12.07□□□□□ -0.48
GAS5-228ENST00000456812 PBRM1Q86U86 1689 aa12.06□□□□□ -0.48
GAS5-228ENST00000456812 TDRD9Q8NDG6 1382 aaKnown RBP12.06□□□□□ -0.48
GAS5-228ENST00000456812 ABCA5Q8WWZ7 1642 aa12.06□□□□□ -0.48
GAS5-228ENST00000456812 CHD1O14646 1710 aa12.05□□□□□ -0.48
GAS5-228ENST00000456812 ABCA10Q8WWZ4 1543 aa12.02□□□□□ -0.48
GAS5-228ENST00000456812 EHMT2Q96KQ7 1210 aa12.02□□□□□ -0.49
GAS5-228ENST00000456812 SNAPC4Q5SXM2 1469 aa12.02□□□□□ -0.49
GAS5-228ENST00000456812 GAPVD1Q14C86 1478 aa11.96□□□□□ -0.49
GAS5-228ENST00000456812 ADAMTS12P58397 1594 aa11.96□□□□□ -0.5
GAS5-228ENST00000456812 GRIN2BQ13224 1484 aa11.94□□□□□ -0.5
GAS5-228ENST00000456812 DNAJC5Q9H3Z4 198 aa11.91□□□□□ -0.5
GAS5-228ENST00000456812 SLC4A2P04920 1241 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms