RNA–Protein interactions for RNA: ENST00000368516.1

C1orf43-203, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 2 BASIC

Gene C1orf43, Length 872 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-203ENST00000368516 NISCHQ9Y2I1 1504 aa39.96■■■■□ 3.99
C1orf43-203ENST00000368516 CCDC180Q9P1Z9 1646 aa35.84■■■■□ 3.33
C1orf43-203ENST00000368516 ABCC9O60706 1549 aa35.55■■■■□ 3.28
C1orf43-203ENST00000368516 RB1CC1Q8TDY2 1594 aa34■■■■□ 3.03
C1orf43-203ENST00000368516 NACADO15069 1562 aa33.81■■■■□ 3
C1orf43-203ENST00000368516 DCAF8L2P0C7V8 631 aa33.57■■■□□ 2.96
C1orf43-203ENST00000368516 MYO15BQ96JP2 1530 aa33.42■■■□□ 2.94
C1orf43-203ENST00000368516 UNC13AQ9UPW8 1703 aa33.22■■■□□ 2.91
C1orf43-203ENST00000368516 ZCCHC6Q5VYS8 1495 aaKnown RBP33.17■■■□□ 2.9
C1orf43-203ENST00000368516 DNAJC5BQ9UF47 199 aa33.1■■■□□ 2.89
C1orf43-203ENST00000368516 PABPN1Q86U42 306 aaKnown RBP eCLIP33.08■■■□□ 2.89
C1orf43-203ENST00000368516 DCAF1Q9Y4B6 1507 aa33.06■■■□□ 2.88
C1orf43-203ENST00000368516 BICRAQ9NZM4 1560 aa32.96■■■□□ 2.87
C1orf43-203ENST00000368516 SHROOM4Q9ULL8 1493 aa32.61■■■□□ 2.81
C1orf43-203ENST00000368516 SCRIBQ14160 1630 aa32.61■■■□□ 2.81
C1orf43-203ENST00000368516 CC2D2AQ9P2K1 1620 aa32.16■■■□□ 2.74
C1orf43-203ENST00000368516 EIF4G1Q04637 1599 aaKnown RBP32.15■■■□□ 2.74
C1orf43-203ENST00000368516 CECR2Q9BXF3 1484 aa32.03■■■□□ 2.72
C1orf43-203ENST00000368516 NCAPD3P42695 1498 aa31.17■■■□□ 2.58
C1orf43-203ENST00000368516 SMARCA4P51532 1647 aa31.15■■■□□ 2.58
C1orf43-203ENST00000368516 ATAD2BQ9ULI0 1458 aa31.09■■■□□ 2.57
C1orf43-203ENST00000368516 SMARCA2P51531 1590 aa31.08■■■□□ 2.57
C1orf43-203ENST00000368516 BAZ1AQ9NRL2 1556 aaPredicted RBP31.03■■■□□ 2.56
C1orf43-203ENST00000368516 HMGXB3Q12766 1538 aa31■■■□□ 2.55
C1orf43-203ENST00000368516 PEG3Q9GZU2 1588 aa30.86■■■□□ 2.53
C1orf43-203ENST00000368516 BAZ1BQ9UIG0 1483 aaKnown RBP30.83■■■□□ 2.53
C1orf43-203ENST00000368516 MROH2BQ7Z745 1585 aa30.76■■■□□ 2.52
C1orf43-203ENST00000368516 ERCC6Q03468 1493 aa30.72■■■□□ 2.51
C1orf43-203ENST00000368516 CUX2O14529 1486 aa30.62■■■□□ 2.49
C1orf43-203ENST00000368516 NESP48681 1621 aa30.58■■■□□ 2.49
C1orf43-203ENST00000368516 LAMC3Q9Y6N6 1575 aa30.48■■■□□ 2.47
C1orf43-203ENST00000368516 WIZO95785 1651 aa30.42■■■□□ 2.46
C1orf43-203ENST00000368516 DNAJC5Q9H3Z4 198 aa30.31■■■□□ 2.44
C1orf43-203ENST00000368516 THOC2Q8NI27 1593 aaKnown RBP30.29■■■□□ 2.44
C1orf43-203ENST00000368516 PDS5BQ9NTI5 1447 aa30.28■■■□□ 2.44
C1orf43-203ENST00000368516 KIF21AQ7Z4S6 1674 aa30.26■■■□□ 2.43
C1orf43-203ENST00000368516 CADPSQ9ULU8 1353 aa30.23■■■□□ 2.43
C1orf43-203ENST00000368516 RSF1Q96T23 1441 aaPredicted RBP30.2■■■□□ 2.42
C1orf43-203ENST00000368516 TOP2AP11388 1531 aaKnown RBP30.08■■■□□ 2.41
C1orf43-203ENST00000368516 MRC2Q9UBG0 1479 aa30■■■□□ 2.39
C1orf43-203ENST00000368516 CFTRP13569 1480 aa29.93■■■□□ 2.38
C1orf43-203ENST00000368516 CEP164Q9UPV0 1460 aa29.93■■■□□ 2.38
C1orf43-203ENST00000368516 WDR62O43379 1518 aa29.92■■■□□ 2.38
C1orf43-203ENST00000368516 FANCD2Q9BXW9 1451 aa29.89■■■□□ 2.38
C1orf43-203ENST00000368516 PRDM2Q13029 1718 aa29.74■■■□□ 2.35
C1orf43-203ENST00000368516 CCDC88BA6NC98 1476 aa29.69■■■□□ 2.34
C1orf43-203ENST00000368516 URB2Q14146 1524 aaKnown RBP29.62■■■□□ 2.33
C1orf43-203ENST00000368516 TOPBP1Q92547 1522 aa29.35■■■□□ 2.29
C1orf43-203ENST00000368516 ABCC8Q09428 1581 aa29.35■■■□□ 2.29
C1orf43-203ENST00000368516 IFT140Q96RY7 1462 aa29.32■■■□□ 2.28
C1orf43-203ENST00000368516 DNMBPQ6XZF7 1577 aa29.29■■■□□ 2.28
C1orf43-203ENST00000368516 ZNF608Q9ULD9 1512 aaPredicted RBP29.21■■■□□ 2.27
C1orf43-203ENST00000368516 OSCARQ8IYS5 282 aa29.21■■■□□ 2.27
C1orf43-203ENST00000368516 EIF4G3O43432 1585 aaKnown RBP29.12■■■□□ 2.25
C1orf43-203ENST00000368516 TARBP1Q13395 1621 aaKnown RBP29.09■■■□□ 2.25
C1orf43-203ENST00000368516 POLA1P09884 1462 aaPredicted RBP29.06■■■□□ 2.24
C1orf43-203ENST00000368516 TRIM41Q8WV44 630 aa29.05■■■□□ 2.24
C1orf43-203ENST00000368516 SUPT5HO00267 1087 aaKnown RBP28.97■■■□□ 2.23
C1orf43-203ENST00000368516 AQRO60306 1485 aaKnown RBP eCLIP28.97■■■□□ 2.233e-6■■■□□ 18.5
C1orf43-203ENST00000368516 SOGA1O94964 1423 aa28.92■■■□□ 2.22
C1orf43-203ENST00000368516 RAD54L2Q9Y4B4 1467 aa28.91■■■□□ 2.22
C1orf43-203ENST00000368516 CUX1P39880 1505 aa28.91■■■□□ 2.22
C1orf43-203ENST00000368516 FGD5Q6ZNL6 1462 aa28.91■■■□□ 2.22
C1orf43-203ENST00000368516 WDR97A6NE52 1622 aa28.87■■■□□ 2.21
C1orf43-203ENST00000368516 CHD1O14646 1710 aa28.86■■■□□ 2.21
C1orf43-203ENST00000368516 RIMBP3CA6NJZ7 1639 aa28.83■■■□□ 2.21
C1orf43-203ENST00000368516 RIMBP3BA6NNM3 1639 aa28.83■■■□□ 2.21
C1orf43-203ENST00000368516 RIMBP3Q9UFD9 1639 aa28.83■■■□□ 2.21
C1orf43-203ENST00000368516 TDRD9Q8NDG6 1382 aaKnown RBP28.81■■■□□ 2.2
C1orf43-203ENST00000368516 ARHGEF11O15085 1522 aa28.76■■■□□ 2.19
C1orf43-203ENST00000368516 FBLN2P98095 1184 aa28.73■■■□□ 2.19
C1orf43-203ENST00000368516 SNAPC4Q5SXM2 1469 aa28.71■■■□□ 2.19
C1orf43-203ENST00000368516 GRIN2BQ13224 1484 aa28.67■■■□□ 2.18
C1orf43-203ENST00000368516 MAGI1Q96QZ7 1491 aaPredicted RBP28.67■■■□□ 2.18
C1orf43-203ENST00000368516 AEBP2Q6ZN18 517 aaPredicted RBP28.62■■■□□ 2.17
C1orf43-203ENST00000368516 ABCA10Q8WWZ4 1543 aa28.61■■■□□ 2.17
C1orf43-203ENST00000368516 PBRM1Q86U86 1689 aa28.61■■■□□ 2.17
C1orf43-203ENST00000368516 GAPVD1Q14C86 1478 aa28.59■■■□□ 2.17
C1orf43-203ENST00000368516 CHMP7Q8WUX9 453 aaPredicted RBP28.58■■■□□ 2.17
C1orf43-203ENST00000368516 SYNJ2O15056 1496 aa28.56■■■□□ 2.16
C1orf43-203ENST00000368516 ABCA5Q8WWZ7 1642 aa28.56■■■□□ 2.16
C1orf43-203ENST00000368516 SYNJ1O43426 1573 aa28.55■■■□□ 2.16
C1orf43-203ENST00000368516 BIVM-ERCC5R4GMW8 1640 aa28.54■■■□□ 2.16
C1orf43-203ENST00000368516 TOP2BQ02880 1626 aa28.53■■■□□ 2.16
C1orf43-203ENST00000368516 CLASP1Q7Z460 1538 aa28.53■■■□□ 2.16
C1orf43-203ENST00000368516 WRNQ14191 1432 aaPredicted RBP eCLIP28.52■■■□□ 2.16
C1orf43-203ENST00000368516 CYB5RLQ6IPT4 315 aa28.48■■■□□ 2.15
C1orf43-203ENST00000368516 ARAP1Q96P48 1450 aa28.47■■■□□ 2.15
C1orf43-203ENST00000368516 ADAMTS12P58397 1594 aa28.33■■■□□ 2.13
C1orf43-203ENST00000368516 GRIN2AQ12879 1464 aa28.3■■■□□ 2.12
C1orf43-203ENST00000368516 ERICH3Q5RHP9 1530 aa28.28■■■□□ 2.12
C1orf43-203ENST00000368516 FHAD1B1AJZ9 1412 aa28.25■■■□□ 2.11
C1orf43-203ENST00000368516 NUP160Q12769 1436 aa28.19■■■□□ 2.1
C1orf43-203ENST00000368516 CEP170Q5SW79 1584 aa28.19■■■□□ 2.1
C1orf43-203ENST00000368516 TRHP20396 242 aaPredicted RBP28.12■■■□□ 2.09
C1orf43-203ENST00000368516 SHROOM2Q13796 1616 aa28.07■■■□□ 2.08
C1orf43-203ENST00000368516 ERCC6L2Q5T890 1561 aa28.05■■■□□ 2.08
C1orf43-203ENST00000368516 KIF27Q86VH2 1401 aa27.96■■■□□ 2.07
C1orf43-203ENST00000368516 RUSC2Q8N2Y8 1516 aa27.93■■■□□ 2.06
C1orf43-203ENST00000368516 CUL7Q14999 1698 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms