RNA–Protein interactions for RNA: ENST00000368518.5

C1orf43-204, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 1 (best) BASIC

Gene C1orf43, Length 1,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-204ENST00000368518 NISCHQ9Y2I1 1504 aa43.83■■■■■ 4.61
C1orf43-204ENST00000368518 CCDC180Q9P1Z9 1646 aa39.21■■■■□ 3.87
C1orf43-204ENST00000368518 ABCC9O60706 1549 aa39.14■■■■□ 3.86
C1orf43-204ENST00000368518 RB1CC1Q8TDY2 1594 aa37.27■■■■□ 3.56
C1orf43-204ENST00000368518 DCAF8L2P0C7V8 631 aa37.09■■■■□ 3.53
C1orf43-204ENST00000368518 NACADO15069 1562 aa37.04■■■■□ 3.52
C1orf43-204ENST00000368518 DNAJC5BQ9UF47 199 aa36.56■■■■□ 3.44
C1orf43-204ENST00000368518 PABPN1Q86U42 306 aaKnown RBP eCLIP36.52■■■■□ 3.44
C1orf43-204ENST00000368518 MYO15BQ96JP2 1530 aa36.52■■■■□ 3.44
C1orf43-204ENST00000368518 UNC13AQ9UPW8 1703 aa36.45■■■■□ 3.43
C1orf43-204ENST00000368518 ZCCHC6Q5VYS8 1495 aaKnown RBP36.35■■■■□ 3.41
C1orf43-204ENST00000368518 BICRAQ9NZM4 1560 aa36.19■■■■□ 3.38
C1orf43-204ENST00000368518 DCAF1Q9Y4B6 1507 aa36.14■■■■□ 3.38
C1orf43-204ENST00000368518 SCRIBQ14160 1630 aa35.86■■■■□ 3.33
C1orf43-204ENST00000368518 SHROOM4Q9ULL8 1493 aa35.61■■■■□ 3.29
C1orf43-204ENST00000368518 CC2D2AQ9P2K1 1620 aa35.33■■■■□ 3.25
C1orf43-204ENST00000368518 EIF4G1Q04637 1599 aaKnown RBP35.28■■■■□ 3.24
C1orf43-204ENST00000368518 CECR2Q9BXF3 1484 aa35.21■■■■□ 3.23
C1orf43-204ENST00000368518 NCAPD3P42695 1498 aa34.19■■■■□ 3.06
C1orf43-204ENST00000368518 SMARCA4P51532 1647 aa34.16■■■■□ 3.06
C1orf43-204ENST00000368518 ATAD2BQ9ULI0 1458 aa34.14■■■■□ 3.06
C1orf43-204ENST00000368518 SMARCA2P51531 1590 aa34.04■■■■□ 3.04
C1orf43-204ENST00000368518 BAZ1AQ9NRL2 1556 aaPredicted RBP34■■■■□ 3.03
C1orf43-204ENST00000368518 HMGXB3Q12766 1538 aa33.94■■■■□ 3.02
C1orf43-204ENST00000368518 BAZ1BQ9UIG0 1483 aaKnown RBP33.85■■■■□ 3.01
C1orf43-204ENST00000368518 MROH2BQ7Z745 1585 aa33.81■■■■□ 3
C1orf43-204ENST00000368518 ERCC6Q03468 1493 aa33.78■■■■□ 3
C1orf43-204ENST00000368518 PEG3Q9GZU2 1588 aa33.77■■■■□ 3
C1orf43-204ENST00000368518 NESP48681 1621 aa33.68■■■□□ 2.98
C1orf43-204ENST00000368518 CUX2O14529 1486 aa33.57■■■□□ 2.97
C1orf43-204ENST00000368518 WIZO95785 1651 aa33.44■■■□□ 2.94
C1orf43-204ENST00000368518 LAMC3Q9Y6N6 1575 aa33.39■■■□□ 2.94
C1orf43-204ENST00000368518 DNAJC5Q9H3Z4 198 aa33.38■■■□□ 2.93
C1orf43-204ENST00000368518 THOC2Q8NI27 1593 aaKnown RBP33.24■■■□□ 2.91
C1orf43-204ENST00000368518 KIF21AQ7Z4S6 1674 aa33.23■■■□□ 2.91
C1orf43-204ENST00000368518 PDS5BQ9NTI5 1447 aa33.22■■■□□ 2.91
C1orf43-204ENST00000368518 CADPSQ9ULU8 1353 aa33.19■■■□□ 2.9
C1orf43-204ENST00000368518 RSF1Q96T23 1441 aaPredicted RBP33.17■■■□□ 2.9
C1orf43-204ENST00000368518 TOP2AP11388 1531 aaKnown RBP32.97■■■□□ 2.87
C1orf43-204ENST00000368518 MRC2Q9UBG0 1479 aa32.93■■■□□ 2.86
C1orf43-204ENST00000368518 CEP164Q9UPV0 1460 aa32.85■■■□□ 2.85
C1orf43-204ENST00000368518 CFTRP13569 1480 aa32.84■■■□□ 2.85
C1orf43-204ENST00000368518 FANCD2Q9BXW9 1451 aa32.84■■■□□ 2.85
C1orf43-204ENST00000368518 WDR62O43379 1518 aa32.82■■■□□ 2.85
C1orf43-204ENST00000368518 CCDC88BA6NC98 1476 aa32.64■■■□□ 2.82
C1orf43-204ENST00000368518 URB2Q14146 1524 aaKnown RBP32.56■■■□□ 2.8
C1orf43-204ENST00000368518 PRDM2Q13029 1718 aa32.52■■■□□ 2.8
C1orf43-204ENST00000368518 TOPBP1Q92547 1522 aa32.23■■■□□ 2.75
C1orf43-204ENST00000368518 IFT140Q96RY7 1462 aa32.16■■■□□ 2.74
C1orf43-204ENST00000368518 ZNF608Q9ULD9 1512 aaPredicted RBP32.15■■■□□ 2.74
C1orf43-204ENST00000368518 OSCARQ8IYS5 282 aa32.13■■■□□ 2.73
C1orf43-204ENST00000368518 ABCC8Q09428 1581 aa32.12■■■□□ 2.73
C1orf43-204ENST00000368518 DNMBPQ6XZF7 1577 aa32.11■■■□□ 2.73
C1orf43-204ENST00000368518 TRIM41Q8WV44 630 aa32.11■■■□□ 2.73
C1orf43-204ENST00000368518 SUPT5HO00267 1087 aaKnown RBP31.97■■■□□ 2.71
C1orf43-204ENST00000368518 EIF4G3O43432 1585 aaKnown RBP31.95■■■□□ 2.71
C1orf43-204ENST00000368518 TARBP1Q13395 1621 aaKnown RBP31.92■■■□□ 2.7
C1orf43-204ENST00000368518 POLA1P09884 1462 aaPredicted RBP31.91■■■□□ 2.7
C1orf43-204ENST00000368518 AQRO60306 1485 aaKnown RBP eCLIP31.89■■■□□ 2.73e-6■■■□□ 18.5
C1orf43-204ENST00000368518 RAD54L2Q9Y4B4 1467 aa31.84■■■□□ 2.69
C1orf43-204ENST00000368518 SOGA1O94964 1423 aa31.79■■■□□ 2.68
C1orf43-204ENST00000368518 CUX1P39880 1505 aa31.75■■■□□ 2.67
C1orf43-204ENST00000368518 FGD5Q6ZNL6 1462 aa31.75■■■□□ 2.67
C1orf43-204ENST00000368518 TDRD9Q8NDG6 1382 aaKnown RBP31.73■■■□□ 2.67
C1orf43-204ENST00000368518 FBLN2P98095 1184 aa31.71■■■□□ 2.67
C1orf43-204ENST00000368518 CHD1O14646 1710 aa31.69■■■□□ 2.66
C1orf43-204ENST00000368518 RIMBP3CA6NJZ7 1639 aa31.69■■■□□ 2.66
C1orf43-204ENST00000368518 RIMBP3BA6NNM3 1639 aa31.69■■■□□ 2.66
C1orf43-204ENST00000368518 RIMBP3Q9UFD9 1639 aa31.69■■■□□ 2.66
C1orf43-204ENST00000368518 ARHGEF11O15085 1522 aa31.59■■■□□ 2.65
C1orf43-204ENST00000368518 SNAPC4Q5SXM2 1469 aa31.55■■■□□ 2.64
C1orf43-204ENST00000368518 WDR97A6NE52 1622 aa31.53■■■□□ 2.64
C1orf43-204ENST00000368518 GRIN2BQ13224 1484 aa31.46■■■□□ 2.63
C1orf43-204ENST00000368518 CHMP7Q8WUX9 453 aaPredicted RBP31.45■■■□□ 2.63
C1orf43-204ENST00000368518 MAGI1Q96QZ7 1491 aaPredicted RBP31.42■■■□□ 2.62
C1orf43-204ENST00000368518 CYB5RLQ6IPT4 315 aa31.42■■■□□ 2.62
C1orf43-204ENST00000368518 GAPVD1Q14C86 1478 aa31.4■■■□□ 2.62
C1orf43-204ENST00000368518 PBRM1Q86U86 1689 aa31.38■■■□□ 2.61
C1orf43-204ENST00000368518 ABCA10Q8WWZ4 1543 aa31.37■■■□□ 2.61
C1orf43-204ENST00000368518 SYNJ2O15056 1496 aa31.33■■■□□ 2.61
C1orf43-204ENST00000368518 WRNQ14191 1432 aaPredicted RBP eCLIP31.31■■■□□ 2.6
C1orf43-204ENST00000368518 ABCA5Q8WWZ7 1642 aa31.31■■■□□ 2.6
C1orf43-204ENST00000368518 SYNJ1O43426 1573 aa31.3■■■□□ 2.6
C1orf43-204ENST00000368518 ARAP1Q96P48 1450 aa31.3■■■□□ 2.6
C1orf43-204ENST00000368518 CLASP1Q7Z460 1538 aa31.29■■■□□ 2.6
C1orf43-204ENST00000368518 TOP2BQ02880 1626 aa31.27■■■□□ 2.6
C1orf43-204ENST00000368518 BIVM-ERCC5R4GMW8 1640 aa31.27■■■□□ 2.6
C1orf43-204ENST00000368518 ADAMTS12P58397 1594 aa31.07■■■□□ 2.56
C1orf43-204ENST00000368518 GRIN2AQ12879 1464 aa31.07■■■□□ 2.56
C1orf43-204ENST00000368518 TRHP20396 242 aaPredicted RBP31.04■■■□□ 2.56
C1orf43-204ENST00000368518 FHAD1B1AJZ9 1412 aa30.98■■■□□ 2.55
C1orf43-204ENST00000368518 ERICH3Q5RHP9 1530 aa30.97■■■□□ 2.55
C1orf43-204ENST00000368518 CEP170Q5SW79 1584 aa30.96■■■□□ 2.55
C1orf43-204ENST00000368518 NUP160Q12769 1436 aa30.93■■■□□ 2.54
C1orf43-204ENST00000368518 ERCC6L2Q5T890 1561 aa30.88■■■□□ 2.53
C1orf43-204ENST00000368518 SHROOM2Q13796 1616 aa30.76■■■□□ 2.52
C1orf43-204ENST00000368518 KIF27Q86VH2 1401 aa30.68■■■□□ 2.5
C1orf43-204ENST00000368518 PRG4Q92954 1404 aaPredicted RBP30.67■■■□□ 2.5
C1orf43-204ENST00000368518 JPH4Q96JJ6 628 aa30.67■■■□□ 2.5
C1orf43-204ENST00000368518 IGF1RP08069 1367 aa30.66■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms