RNA–Protein interactions for RNA: ENST00000528780.5

IFITM1-204, Transcript of interferon induced transmembrane protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene IFITM1, Length 730 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFITM1-204ENST00000528780 NISCHQ9Y2I1 1504 aa35.03■■■■□ 3.2
IFITM1-204ENST00000528780 CCDC180Q9P1Z9 1646 aa31.07■■■□□ 2.56
IFITM1-204ENST00000528780 ABCC9O60706 1549 aa29.61■■■□□ 2.33
IFITM1-204ENST00000528780 ZCCHC6Q5VYS8 1495 aaKnown RBP29.33■■■□□ 2.29
IFITM1-204ENST00000528780 DCAF1Q9Y4B6 1507 aa29.1■■■□□ 2.25
IFITM1-204ENST00000528780 MYO15BQ96JP2 1530 aa29.04■■■□□ 2.24
IFITM1-204ENST00000528780 NACADO15069 1562 aa28.98■■■□□ 2.23
IFITM1-204ENST00000528780 RB1CC1Q8TDY2 1594 aa28.87■■■□□ 2.21
IFITM1-204ENST00000528780 DCAF8L2P0C7V8 631 aa28.77■■■□□ 2.2
IFITM1-204ENST00000528780 UNC13AQ9UPW8 1703 aa28.36■■■□□ 2.13
IFITM1-204ENST00000528780 SCRIBQ14160 1630 aa28.23■■■□□ 2.11
IFITM1-204ENST00000528780 BICRAQ9NZM4 1560 aa27.96■■■□□ 2.07
IFITM1-204ENST00000528780 SHROOM4Q9ULL8 1493 aa27.81■■■□□ 2.04
IFITM1-204ENST00000528780 PABPN1Q86U42 306 aaKnown RBP eCLIP27.64■■■□□ 2.02
IFITM1-204ENST00000528780 EIF4G1Q04637 1599 aaKnown RBP27.17■■□□□ 1.94
IFITM1-204ENST00000528780 BAZ1AQ9NRL2 1556 aaPredicted RBP27.15■■□□□ 1.94
IFITM1-204ENST00000528780 CECR2Q9BXF3 1484 aa27.14■■□□□ 1.94
IFITM1-204ENST00000528780 SMARCA4P51532 1647 aa27.12■■□□□ 1.93
IFITM1-204ENST00000528780 MROH2BQ7Z745 1585 aa26.97■■□□□ 1.91
IFITM1-204ENST00000528780 CC2D2AQ9P2K1 1620 aa26.91■■□□□ 1.9
IFITM1-204ENST00000528780 PEG3Q9GZU2 1588 aa26.88■■□□□ 1.89
IFITM1-204ENST00000528780 RSF1Q96T23 1441 aaPredicted RBP26.83■■□□□ 1.89
IFITM1-204ENST00000528780 SMARCA2P51531 1590 aa26.81■■□□□ 1.88
IFITM1-204ENST00000528780 WIZO95785 1651 aa26.76■■□□□ 1.87
IFITM1-204ENST00000528780 ATAD2BQ9ULI0 1458 aa26.74■■□□□ 1.87
IFITM1-204ENST00000528780 HMGXB3Q12766 1538 aa26.67■■□□□ 1.86
IFITM1-204ENST00000528780 NCAPD3P42695 1498 aa26.67■■□□□ 1.86
IFITM1-204ENST00000528780 BAZ1BQ9UIG0 1483 aaKnown RBP26.56■■□□□ 1.84
IFITM1-204ENST00000528780 DNAJC5BQ9UF47 199 aa26.56■■□□□ 1.84
IFITM1-204ENST00000528780 TOP2AP11388 1531 aaKnown RBP26.53■■□□□ 1.84
IFITM1-204ENST00000528780 SUPT5HO00267 1087 aaKnown RBP26.42■■□□□ 1.82
IFITM1-204ENST00000528780 CCDC88BA6NC98 1476 aa26.12■■□□□ 1.77
IFITM1-204ENST00000528780 PRDM2Q13029 1718 aa26■■□□□ 1.75
IFITM1-204ENST00000528780 LAMC3Q9Y6N6 1575 aa25.95■■□□□ 1.75
IFITM1-204ENST00000528780 CFTRP13569 1480 aa25.88■■□□□ 1.73
IFITM1-204ENST00000528780 CADPSQ9ULU8 1353 aa25.87■■□□□ 1.73
IFITM1-204ENST00000528780 NESP48681 1621 aa25.79■■□□□ 1.72
IFITM1-204ENST00000528780 KIF21AQ7Z4S6 1674 aa25.67■■□□□ 1.7
IFITM1-204ENST00000528780 PDS5BQ9NTI5 1447 aa25.66■■□□□ 1.7
IFITM1-204ENST00000528780 FANCD2Q9BXW9 1451 aa25.6■■□□□ 1.69
IFITM1-204ENST00000528780 CEP164Q9UPV0 1460 aa25.53■■□□□ 1.68
IFITM1-204ENST00000528780 ERCC6Q03468 1493 aa25.49■■□□□ 1.67
IFITM1-204ENST00000528780 THOC2Q8NI27 1593 aaKnown RBP25.43■■□□□ 1.66
IFITM1-204ENST00000528780 MRC2Q9UBG0 1479 aa25.39■■□□□ 1.65
IFITM1-204ENST00000528780 ABCC8Q09428 1581 aa25.35■■□□□ 1.65
IFITM1-204ENST00000528780 DNMBPQ6XZF7 1577 aa25.35■■□□□ 1.65
IFITM1-204ENST00000528780 WDR62O43379 1518 aa25.33■■□□□ 1.65
IFITM1-204ENST00000528780 BIVM-ERCC5R4GMW8 1640 aa25.33■■□□□ 1.65
IFITM1-204ENST00000528780 URB2Q14146 1524 aaKnown RBP25.32■■□□□ 1.64
IFITM1-204ENST00000528780 WRNQ14191 1432 aaPredicted RBP eCLIP25.3■■□□□ 1.64
IFITM1-204ENST00000528780 CUX1P39880 1505 aa25.28■■□□□ 1.64
IFITM1-204ENST00000528780 TOP2BQ02880 1626 aa25.28■■□□□ 1.64
IFITM1-204ENST00000528780 TOPBP1Q92547 1522 aa25.27■■□□□ 1.64
IFITM1-204ENST00000528780 SYNJ1O43426 1573 aa25.26■■□□□ 1.63
IFITM1-204ENST00000528780 CUX2O14529 1486 aa25.11■■□□□ 1.61
IFITM1-204ENST00000528780 FGD5Q6ZNL6 1462 aa25.1■■□□□ 1.61
IFITM1-204ENST00000528780 POLA1P09884 1462 aaPredicted RBP25.09■■□□□ 1.61
IFITM1-204ENST00000528780 CHIC1Q5VXU3 224 aa25.05■■□□□ 1.6
IFITM1-204ENST00000528780 WDR97A6NE52 1622 aa25.04■■□□□ 1.6
IFITM1-204ENST00000528780 TARBP1Q13395 1621 aaKnown RBP25.01■■□□□ 1.59
IFITM1-204ENST00000528780 IFT140Q96RY7 1462 aa24.99■■□□□ 1.59
IFITM1-204ENST00000528780 TRIM41Q8WV44 630 aa24.98■■□□□ 1.59
IFITM1-204ENST00000528780 SOGA1O94964 1423 aa24.94■■□□□ 1.58
IFITM1-204ENST00000528780 ABCA10Q8WWZ4 1543 aa24.92■■□□□ 1.58
IFITM1-204ENST00000528780 RAD54L2Q9Y4B4 1467 aa24.9■■□□□ 1.58
IFITM1-204ENST00000528780 ABCA5Q8WWZ7 1642 aa24.83■■□□□ 1.57
IFITM1-204ENST00000528780 EIF4G3O43432 1585 aaKnown RBP24.8■■□□□ 1.56
IFITM1-204ENST00000528780 PBRM1Q86U86 1689 aa24.78■■□□□ 1.56
IFITM1-204ENST00000528780 ZNF608Q9ULD9 1512 aaPredicted RBP24.76■■□□□ 1.55
IFITM1-204ENST00000528780 KIF27Q86VH2 1401 aa24.73■■□□□ 1.55
IFITM1-204ENST00000528780 GAPVD1Q14C86 1478 aa24.7■■□□□ 1.55
IFITM1-204ENST00000528780 EEA1Q15075 1411 aa24.69■■□□□ 1.54
IFITM1-204ENST00000528780 TDRD9Q8NDG6 1382 aaKnown RBP24.67■■□□□ 1.54
IFITM1-204ENST00000528780 ERICH3Q5RHP9 1530 aa24.66■■□□□ 1.54
IFITM1-204ENST00000528780 AQRO60306 1485 aaKnown RBP eCLIP24.65■■□□□ 1.546e-16■■■■■ 35.8
IFITM1-204ENST00000528780 GRIN2BQ13224 1484 aa24.64■■□□□ 1.53
IFITM1-204ENST00000528780 RUSC2Q8N2Y8 1516 aa24.62■■□□□ 1.53
IFITM1-204ENST00000528780 CUL7Q14999 1698 aa24.61■■□□□ 1.53
IFITM1-204ENST00000528780 MAGI1Q96QZ7 1491 aaPredicted RBP24.56■■□□□ 1.52
IFITM1-204ENST00000528780 ADAMTS12P58397 1594 aa24.54■■□□□ 1.52
IFITM1-204ENST00000528780 SNAPC4Q5SXM2 1469 aa24.51■■□□□ 1.51
IFITM1-204ENST00000528780 IGF1RP08069 1367 aa24.51■■□□□ 1.51
IFITM1-204ENST00000528780 FHAD1B1AJZ9 1412 aa24.44■■□□□ 1.5
IFITM1-204ENST00000528780 CHD1O14646 1710 aa24.44■■□□□ 1.5
IFITM1-204ENST00000528780 KIF21BO75037 1637 aa24.44■■□□□ 1.5
IFITM1-204ENST00000528780 CSRNP3Q8WYN3 585 aa24.44■■□□□ 1.5
IFITM1-204ENST00000528780 SYNJ2O15056 1496 aa24.42■■□□□ 1.5
IFITM1-204ENST00000528780 PRXQ9BXM0 1461 aa24.42■■□□□ 1.5
IFITM1-204ENST00000528780 CARMIL1Q5VZK9 1371 aa24.4■■□□□ 1.5
IFITM1-204ENST00000528780 DNAJC5Q9H3Z4 198 aa24.39■■□□□ 1.49
IFITM1-204ENST00000528780 FAM9AQ8IZU1 332 aaPredicted RBP24.36■■□□□ 1.49
IFITM1-204ENST00000528780 RAPGEF2Q9Y4G8 1499 aa24.36■■□□□ 1.49
IFITM1-204ENST00000528780 GRIN2AQ12879 1464 aa24.32■■□□□ 1.48
IFITM1-204ENST00000528780 CTTNBP2Q8WZ74 1663 aa24.27■■□□□ 1.48
IFITM1-204ENST00000528780 GOLGA3Q08378 1498 aa24.26■■□□□ 1.47
IFITM1-204ENST00000528780 CHMP7Q8WUX9 453 aaPredicted RBP24.25■■□□□ 1.47
IFITM1-204ENST00000528780 CEP170Q5SW79 1584 aa24.2■■□□□ 1.47
IFITM1-204ENST00000528780 NUP160Q12769 1436 aa24.2■■□□□ 1.46
IFITM1-204ENST00000528780 FBLN2P98095 1184 aa24.16■■□□□ 1.46
IFITM1-204ENST00000528780 CLASP1Q7Z460 1538 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms