RNA–Protein interactions for RNA: ENST00000547908.1

SLC25A3-208, Transcript of solute carrier family 25 member 3, humanhuman

TSL 2

Gene SLC25A3, Length 893 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A3-208ENST00000547908 AEBP2Q6ZN18 517 aaPredicted RBP32.99■■■□□ 2.87
SLC25A3-208ENST00000547908 CHIC1Q5VXU3 224 aa31.99■■■□□ 2.71
SLC25A3-208ENST00000547908 PHF23Q9BUL5 403 aaPredicted RBP28.16■■■□□ 2.1
SLC25A3-208ENST00000547908 SENP3Q9H4L4 574 aaPredicted RBP27.95■■■□□ 2.06
SLC25A3-208ENST00000547908 FOXD1Q16676 465 aa26.01■■□□□ 1.75
SLC25A3-208ENST00000547908 PLPPR3Q6T4P5 718 aa25.83■■□□□ 1.73
SLC25A3-208ENST00000547908 PPP6R1Q9UPN7 881 aa24.89■■□□□ 1.58
SLC25A3-208ENST00000547908 ADRA2BP18089 450 aa24.82■■□□□ 1.56
SLC25A3-208ENST00000547908 PIAS4Q8N2W9 510 aaPredicted RBP24.43■■□□□ 1.5
SLC25A3-208ENST00000547908 MSH5O43196 834 aa24■■□□□ 1.43
SLC25A3-208ENST00000547908 PPP4R3CPQ6ZMV5 832 aa22.76■■□□□ 1.23
SLC25A3-208ENST00000547908 SCAF1Q9H7N4 1312 aaKnown RBP22.6■■□□□ 1.21
SLC25A3-208ENST00000547908 MAPK8IP2Q13387 824 aaPredicted RBP22.58■■□□□ 1.21
SLC25A3-208ENST00000547908 DMRT2Q9Y5R5 561 aa22.32■■□□□ 1.16
SLC25A3-208ENST00000547908 POTEDQ86YR6 584 aa22.26■■□□□ 1.15
SLC25A3-208ENST00000547908 CNKSR2Q8WXI2 1034 aa22.15■■□□□ 1.14
SLC25A3-208ENST00000547908 KCNA4P22459 653 aa22.03■■□□□ 1.12
SLC25A3-208ENST00000547908 NCBP3Q53F19 620 aaKnown RBP22.03■■□□□ 1.12
SLC25A3-208ENST00000547908 NPM3O75607 178 aaKnown RBP21.81■■□□□ 1.08
SLC25A3-208ENST00000547908 HOXD11P31277 338 aaPredicted RBP21.79■■□□□ 1.08
SLC25A3-208ENST00000547908 RNF216Q9NWF9 866 aaPredicted RBP21.78■■□□□ 1.08
SLC25A3-208ENST00000547908 DNAJC5BQ9UF47 199 aa21.28■■□□□ 1
SLC25A3-208ENST00000547908 DCAF8L1A6NGE4 600 aa21.23■□□□□ 0.99
SLC25A3-208ENST00000547908 SLC4A1APQ9BWU0 796 aaKnown RBP20.89■□□□□ 0.93
SLC25A3-208ENST00000547908 SLC4A2P04920 1241 aa20.68■□□□□ 0.9
SLC25A3-208ENST00000547908 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.66■□□□□ 0.9
SLC25A3-208ENST00000547908 RNF39Q9H2S5 420 aa20.6■□□□□ 0.89
SLC25A3-208ENST00000547908 U3KPZ7 1027 aaPredicted RBP20.4■□□□□ 0.86
SLC25A3-208ENST00000547908 ZBTB22O15209 634 aa20.33■□□□□ 0.85
SLC25A3-208ENST00000547908 FOXD4L1Q9NU39 408 aa20.31■□□□□ 0.84
SLC25A3-208ENST00000547908 C1QBPQ07021 282 aaKnown RBP20.3■□□□□ 0.84
SLC25A3-208ENST00000547908 MYCNP04198 464 aaPredicted RBP20.12■□□□□ 0.81
SLC25A3-208ENST00000547908 CACNB1Q02641 598 aaPredicted RBP20.11■□□□□ 0.81
SLC25A3-208ENST00000547908 EHMT2Q96KQ7 1210 aa20.05■□□□□ 0.8
SLC25A3-208ENST00000547908 CSRNP3Q8WYN3 585 aa20■□□□□ 0.79
SLC25A3-208ENST00000547908 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.97■□□□□ 0.79
SLC25A3-208ENST00000547908 HNRNPUL2Q1KMD3 747 aaKnown RBP19.97■□□□□ 0.79
SLC25A3-208ENST00000547908 SAMD1Q6SPF0 538 aaPredicted RBP19.92■□□□□ 0.78
SLC25A3-208ENST00000547908 SPINK5Q9NQ38 1064 aaPredicted RBP19.88■□□□□ 0.77
SLC25A3-208ENST00000547908 APLP2Q06481 763 aa19.78■□□□□ 0.76
SLC25A3-208ENST00000547908 CAPN15O75808 1086 aa19.73■□□□□ 0.75
SLC25A3-208ENST00000547908 ATF5Q9Y2D1 282 aaPredicted RBP19.66■□□□□ 0.74
SLC25A3-208ENST00000547908 ATXN8OSP0DMR3 200 aa19.62■□□□□ 0.73
SLC25A3-208ENST00000547908 ZNF219Q9P2Y4 722 aaPredicted RBP19.6■□□□□ 0.73
SLC25A3-208ENST00000547908 TRHP20396 242 aaPredicted RBP19.58■□□□□ 0.72
SLC25A3-208ENST00000547908 DSG3P32926 999 aa19.53■□□□□ 0.72
SLC25A3-208ENST00000547908 ABCB7O75027 752 aa19.38■□□□□ 0.69
SLC25A3-208ENST00000547908 POLA2Q14181 598 aa19.26■□□□□ 0.67
SLC25A3-208ENST00000547908 ZBTB12Q9Y330 459 aaPredicted RBP18.9■□□□□ 0.62
SLC25A3-208ENST00000547908 MKRN4PQ13434 485 aaPredicted RBP18.81■□□□□ 0.6
SLC25A3-208ENST00000547908 FBLN2P98095 1184 aa18.72■□□□□ 0.59
SLC25A3-208ENST00000547908 OSCARQ8IYS5 282 aa18.64■□□□□ 0.57
SLC25A3-208ENST00000547908 RBM42Q9BTD8 480 aaKnown RBP18.54■□□□□ 0.56
SLC25A3-208ENST00000547908 SPDYE2BA6NHP3 402 aa18.41■□□□□ 0.54
SLC25A3-208ENST00000547908 SPDYE6P0CI01 402 aa18.41■□□□□ 0.54
SLC25A3-208ENST00000547908 SPDYE2Q495Y8 402 aa18.41■□□□□ 0.54
SLC25A3-208ENST00000547908 AKT1S1Q96B36 256 aa18.3■□□□□ 0.52
SLC25A3-208ENST00000547908 SSUH2Q9Y2M2 353 aa18.3■□□□□ 0.52
SLC25A3-208ENST00000547908 ZNF692Q9BU19 519 aaPredicted RBP18.26■□□□□ 0.51
SLC25A3-208ENST00000547908 SPDYE4A6NLX3 237 aa18.2■□□□□ 0.5
SLC25A3-208ENST00000547908 REM2Q8IYK8 340 aaPredicted RBP18.14■□□□□ 0.49
SLC25A3-208ENST00000547908 PABPN1Q86U42 306 aaKnown RBP eCLIP18.04■□□□□ 0.48
SLC25A3-208ENST00000547908 FKBP8Q14318 412 aa18.02■□□□□ 0.48
SLC25A3-208ENST00000547908 PROM2Q8N271 834 aa17.99■□□□□ 0.47
SLC25A3-208ENST00000547908 PITPNM1O00562 1244 aa17.96■□□□□ 0.47
SLC25A3-208ENST00000547908 CHRDL2Q6WN34 429 aa17.89■□□□□ 0.45
SLC25A3-208ENST00000547908 SPDYE1Q8NFV5 336 aaPredicted RBP17.89■□□□□ 0.45
SLC25A3-208ENST00000547908 CLEC11AQ9Y240 323 aa17.77■□□□□ 0.44
SLC25A3-208ENST00000547908 FXR2P51116 673 aaKnown RBP eCLIP17.67■□□□□ 0.42
SLC25A3-208ENST00000547908 STAG3Q9UJ98 1225 aa17.67■□□□□ 0.42
SLC25A3-208ENST00000547908 PIP4P2Q8N4L2 257 aa17.64■□□□□ 0.41
SLC25A3-208ENST00000547908 PRR29P0C7W0 189 aa17.6■□□□□ 0.41
SLC25A3-208ENST00000547908 POTEHQ6S545 545 aa17.56■□□□□ 0.4
SLC25A3-208ENST00000547908 PRKAR2AP13861 404 aaKnown RBP17.46■□□□□ 0.39
SLC25A3-208ENST00000547908 CHADLQ6NUI6 762 aa17.43■□□□□ 0.38
SLC25A3-208ENST00000547908 CREBZFQ9NS37 354 aa17.42■□□□□ 0.38
SLC25A3-208ENST00000547908 FBXO3Q9UK99 471 aa17.4■□□□□ 0.38
SLC25A3-208ENST00000547908 MNX1P50219 401 aaPredicted RBP17.27■□□□□ 0.36
SLC25A3-208ENST00000547908 FARP1Q9Y4F1 1045 aaPredicted RBP17.25■□□□□ 0.35
SLC25A3-208ENST00000547908 VASPP50552 380 aaPredicted RBP17.24■□□□□ 0.35
SLC25A3-208ENST00000547908 MIER1Q8N108 512 aa17.23■□□□□ 0.35
SLC25A3-208ENST00000547908 PLCD3Q8N3E9 789 aa17.18■□□□□ 0.34
SLC25A3-208ENST00000547908 PLEKHG5O94827 1062 aa17.1■□□□□ 0.33
SLC25A3-208ENST00000547908 C19orf67A6NJJ6 358 aa17.07■□□□□ 0.32
SLC25A3-208ENST00000547908 HAX1O00165 279 aa17.04■□□□□ 0.32
SLC25A3-208ENST00000547908 NPM1P06748 294 aaKnown RBP eCLIP17.02■□□□□ 0.32
SLC25A3-208ENST00000547908 IFNLR1Q8IU57 520 aaPredicted RBP17.01■□□□□ 0.31
SLC25A3-208ENST00000547908 ZBTB47Q9UFB7 747 aaPredicted RBP17.01■□□□□ 0.31
SLC25A3-208ENST00000547908 EVX2Q03828 476 aa17■□□□□ 0.31
SLC25A3-208ENST00000547908 CD44P16070 742 aaKnown RBP16.94■□□□□ 0.3
SLC25A3-208ENST00000547908 NUBP1P53384 320 aa16.92■□□□□ 0.3
SLC25A3-208ENST00000547908 RASEFQ8IZ41 740 aa16.88■□□□□ 0.29
SLC25A3-208ENST00000547908 KLHL34Q8N239 644 aa16.88■□□□□ 0.29
SLC25A3-208ENST00000547908 ZRANB1Q9UGI0 708 aa16.81■□□□□ 0.28
SLC25A3-208ENST00000547908 SP7Q8TDD2 431 aaPredicted RBP16.8■□□□□ 0.28
SLC25A3-208ENST00000547908 SPOCK2Q92563 424 aa16.78■□□□□ 0.28
SLC25A3-208ENST00000547908 ZNF579Q8NAF0 562 aaKnown RBP16.77■□□□□ 0.28
SLC25A3-208ENST00000547908 PAK3O75914 559 aaPredicted RBP16.76■□□□□ 0.27
SLC25A3-208ENST00000547908 TSPYL2Q9H2G4 693 aaPredicted RBP16.76■□□□□ 0.27
SLC25A3-208ENST00000547908 CCDC61Q9Y6R9 512 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms