RNA–Protein interactions for RNA: ENST00000350592.7

C1orf43-201, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 1 (best) BASIC

Gene C1orf43, Length 1,610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-201ENST00000350592 NISCHQ9Y2I1 1504 aa37.47■■■■□ 3.59
C1orf43-201ENST00000350592 CCDC180Q9P1Z9 1646 aa32.69■■■□□ 2.82
C1orf43-201ENST00000350592 ZCCHC6Q5VYS8 1495 aaKnown RBP31.48■■■□□ 2.63
C1orf43-201ENST00000350592 DCAF1Q9Y4B6 1507 aa31.03■■■□□ 2.56
C1orf43-201ENST00000350592 DCAF8L2P0C7V8 631 aa30.86■■■□□ 2.53
C1orf43-201ENST00000350592 ABCC9O60706 1549 aa30.84■■■□□ 2.53
C1orf43-201ENST00000350592 MYO15BQ96JP2 1530 aa30.68■■■□□ 2.5
C1orf43-201ENST00000350592 SHROOM4Q9ULL8 1493 aa30.47■■■□□ 2.47
C1orf43-201ENST00000350592 NACADO15069 1562 aa30.45■■■□□ 2.47
C1orf43-201ENST00000350592 RB1CC1Q8TDY2 1594 aa30.18■■■□□ 2.42
C1orf43-201ENST00000350592 SCRIBQ14160 1630 aa30■■■□□ 2.39
C1orf43-201ENST00000350592 UNC13AQ9UPW8 1703 aa29.51■■■□□ 2.31
C1orf43-201ENST00000350592 SUPT5HO00267 1087 aaKnown RBP29.34■■■□□ 2.29
C1orf43-201ENST00000350592 BICRAQ9NZM4 1560 aa29.24■■■□□ 2.27
C1orf43-201ENST00000350592 CECR2Q9BXF3 1484 aa29.08■■■□□ 2.25
C1orf43-201ENST00000350592 PABPN1Q86U42 306 aaKnown RBP eCLIP29.07■■■□□ 2.24
C1orf43-201ENST00000350592 RSF1Q96T23 1441 aaPredicted RBP29.06■■■□□ 2.24
C1orf43-201ENST00000350592 BAZ1AQ9NRL2 1556 aaPredicted RBP28.94■■■□□ 2.22
C1orf43-201ENST00000350592 MROH2BQ7Z745 1585 aa28.92■■■□□ 2.22
C1orf43-201ENST00000350592 SMARCA4P51532 1647 aa28.79■■■□□ 2.2
C1orf43-201ENST00000350592 WIZO95785 1651 aa28.67■■■□□ 2.18
C1orf43-201ENST00000350592 PEG3Q9GZU2 1588 aa28.47■■■□□ 2.15
C1orf43-201ENST00000350592 TOP2AP11388 1531 aaKnown RBP28.42■■■□□ 2.14
C1orf43-201ENST00000350592 EIF4G1Q04637 1599 aaKnown RBP28.36■■■□□ 2.13
C1orf43-201ENST00000350592 SMARCA2P51531 1590 aa28.33■■■□□ 2.13
C1orf43-201ENST00000350592 ATAD2BQ9ULI0 1458 aa28.32■■■□□ 2.12
C1orf43-201ENST00000350592 BAZ1BQ9UIG0 1483 aaKnown RBP28.16■■■□□ 2.1
C1orf43-201ENST00000350592 CHIC1Q5VXU3 224 aa28.14■■■□□ 2.09
C1orf43-201ENST00000350592 CCDC88BA6NC98 1476 aa28.11■■■□□ 2.09
C1orf43-201ENST00000350592 NCAPD3P42695 1498 aa28.11■■■□□ 2.09
C1orf43-201ENST00000350592 HMGXB3Q12766 1538 aa28.07■■■□□ 2.08
C1orf43-201ENST00000350592 CC2D2AQ9P2K1 1620 aa27.93■■■□□ 2.06
C1orf43-201ENST00000350592 TRIM41Q8WV44 630 aa27.63■■■□□ 2.01
C1orf43-201ENST00000350592 ABCC8Q09428 1581 aa27.48■■□□□ 1.99
C1orf43-201ENST00000350592 CFTRP13569 1480 aa27.48■■□□□ 1.99
C1orf43-201ENST00000350592 CADPSQ9ULU8 1353 aa27.38■■□□□ 1.97
C1orf43-201ENST00000350592 WRNQ14191 1432 aaPredicted RBP eCLIP27.36■■□□□ 1.97
C1orf43-201ENST00000350592 PRDM2Q13029 1718 aa27.31■■□□□ 1.96
C1orf43-201ENST00000350592 SYNJ1O43426 1573 aa27.22■■□□□ 1.95
C1orf43-201ENST00000350592 DNAJC5BQ9UF47 199 aa27.18■■□□□ 1.94
C1orf43-201ENST00000350592 LAMC3Q9Y6N6 1575 aa27.14■■□□□ 1.94
C1orf43-201ENST00000350592 TOP2BQ02880 1626 aa27.14■■□□□ 1.93
C1orf43-201ENST00000350592 BIVM-ERCC5R4GMW8 1640 aa27.11■■□□□ 1.93
C1orf43-201ENST00000350592 NESP48681 1621 aa27.08■■□□□ 1.92
C1orf43-201ENST00000350592 FAM9AQ8IZU1 332 aaPredicted RBP27.06■■□□□ 1.92
C1orf43-201ENST00000350592 FANCD2Q9BXW9 1451 aa27.05■■□□□ 1.92
C1orf43-201ENST00000350592 CUX1P39880 1505 aa27.05■■□□□ 1.92
C1orf43-201ENST00000350592 EEA1Q15075 1411 aa27.01■■□□□ 1.92
C1orf43-201ENST00000350592 LOC105371045A0A1W2PR82 267 aa27.01■■□□□ 1.91
C1orf43-201ENST00000350592 SOGA1O94964 1423 aa26.99■■□□□ 1.91
C1orf43-201ENST00000350592 PDS5BQ9NTI5 1447 aa26.94■■□□□ 1.9
C1orf43-201ENST00000350592 CEP164Q9UPV0 1460 aa26.88■■□□□ 1.89
C1orf43-201ENST00000350592 RUSC2Q8N2Y8 1516 aa26.86■■□□□ 1.89
C1orf43-201ENST00000350592 DNMBPQ6XZF7 1577 aa26.83■■□□□ 1.89
C1orf43-201ENST00000350592 CSRNP3Q8WYN3 585 aa26.82■■□□□ 1.88
C1orf43-201ENST00000350592 TOPBP1Q92547 1522 aa26.76■■□□□ 1.88
C1orf43-201ENST00000350592 KIF21AQ7Z4S6 1674 aa26.75■■□□□ 1.87
C1orf43-201ENST00000350592 FGD5Q6ZNL6 1462 aa26.75■■□□□ 1.87
C1orf43-201ENST00000350592 URB2Q14146 1524 aaKnown RBP26.71■■□□□ 1.87
C1orf43-201ENST00000350592 KIF27Q86VH2 1401 aa26.68■■□□□ 1.86
C1orf43-201ENST00000350592 EHMT2Q96KQ7 1210 aa26.64■■□□□ 1.85
C1orf43-201ENST00000350592 POLA1P09884 1462 aaPredicted RBP26.63■■□□□ 1.85
C1orf43-201ENST00000350592 KIF21BO75037 1637 aa26.63■■□□□ 1.85
C1orf43-201ENST00000350592 GOLGA3Q08378 1498 aa26.59■■□□□ 1.85
C1orf43-201ENST00000350592 CUX2O14529 1486 aa26.58■■□□□ 1.85
C1orf43-201ENST00000350592 MRC2Q9UBG0 1479 aa26.58■■□□□ 1.85
C1orf43-201ENST00000350592 ABCA10Q8WWZ4 1543 aa26.55■■□□□ 1.84
C1orf43-201ENST00000350592 TNIKQ9UKE5 1360 aa26.53■■□□□ 1.84
C1orf43-201ENST00000350592 RAD54L2Q9Y4B4 1467 aa26.52■■□□□ 1.84
C1orf43-201ENST00000350592 PRXQ9BXM0 1461 aa26.5■■□□□ 1.83
C1orf43-201ENST00000350592 ERCC6Q03468 1493 aa26.46■■□□□ 1.83
C1orf43-201ENST00000350592 ERICH3Q5RHP9 1530 aa26.46■■□□□ 1.83
C1orf43-201ENST00000350592 UBTFP17480 764 aaKnown RBP26.45■■□□□ 1.82
C1orf43-201ENST00000350592 WDR62O43379 1518 aa26.44■■□□□ 1.82
C1orf43-201ENST00000350592 RAPGEF2Q9Y4G8 1499 aa26.44■■□□□ 1.82
C1orf43-201ENST00000350592 WDR97A6NE52 1622 aa26.43■■□□□ 1.82
C1orf43-201ENST00000350592 IGF1RP08069 1367 aa26.43■■□□□ 1.82
C1orf43-201ENST00000350592 TARBP1Q13395 1621 aaKnown RBP26.35■■□□□ 1.81
C1orf43-201ENST00000350592 CEP162Q5TB80 1403 aa26.35■■□□□ 1.81
C1orf43-201ENST00000350592 THOC2Q8NI27 1593 aaKnown RBP26.34■■□□□ 1.81
C1orf43-201ENST00000350592 ABCA5Q8WWZ7 1642 aa26.31■■□□□ 1.8
C1orf43-201ENST00000350592 CARMIL1Q5VZK9 1371 aa26.3■■□□□ 1.8
C1orf43-201ENST00000350592 IFT140Q96RY7 1462 aa26.27■■□□□ 1.8
C1orf43-201ENST00000350592 TDRD9Q8NDG6 1382 aaKnown RBP26.26■■□□□ 1.8
C1orf43-201ENST00000350592 GAPVD1Q14C86 1478 aa26.26■■□□□ 1.79
C1orf43-201ENST00000350592 CUL7Q14999 1698 aa26.24■■□□□ 1.79
C1orf43-201ENST00000350592 CLIP1P30622 1438 aa26.16■■□□□ 1.78
C1orf43-201ENST00000350592 AQRO60306 1485 aaKnown RBP eCLIP26.1■■□□□ 1.773e-6■■■□□ 18.5
C1orf43-201ENST00000350592 PBRM1Q86U86 1689 aa26.09■■□□□ 1.77
C1orf43-201ENST00000350592 ZNF608Q9ULD9 1512 aaPredicted RBP26.07■■□□□ 1.76
C1orf43-201ENST00000350592 GRIN2BQ13224 1484 aa26.06■■□□□ 1.76
C1orf43-201ENST00000350592 FHAD1B1AJZ9 1412 aa26■■□□□ 1.75
C1orf43-201ENST00000350592 EIF4G3O43432 1585 aaKnown RBP25.99■■□□□ 1.75
C1orf43-201ENST00000350592 ADAMTS12P58397 1594 aa25.97■■□□□ 1.75
C1orf43-201ENST00000350592 RANGAP1P46060 587 aaPredicted RBP25.95■■□□□ 1.74
C1orf43-201ENST00000350592 VPS8Q8N3P4 1428 aa25.94■■□□□ 1.74
C1orf43-201ENST00000350592 CTTNBP2Q8WZ74 1663 aa25.91■■□□□ 1.74
C1orf43-201ENST00000350592 ARAP1Q96P48 1450 aa25.9■■□□□ 1.74
C1orf43-201ENST00000350592 ARHGAP35Q9NRY4 1499 aa25.89■■□□□ 1.74
C1orf43-201ENST00000350592 SNAPC4Q5SXM2 1469 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms