RNA–Protein interactions for RNA: ENST00000470180.2

C1orf43-207, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 5

Gene C1orf43, Length 1,861 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-207ENST00000470180 NISCHQ9Y2I1 1504 aa38.15■■■■□ 3.7
C1orf43-207ENST00000470180 CCDC180Q9P1Z9 1646 aa33.12■■■□□ 2.89
C1orf43-207ENST00000470180 ZCCHC6Q5VYS8 1495 aaKnown RBP32.06■■■□□ 2.72
C1orf43-207ENST00000470180 DCAF8L2P0C7V8 631 aa31.51■■■□□ 2.63
C1orf43-207ENST00000470180 DCAF1Q9Y4B6 1507 aa31.5■■■□□ 2.63
C1orf43-207ENST00000470180 SHROOM4Q9ULL8 1493 aa31.31■■■□□ 2.6
C1orf43-207ENST00000470180 ABCC9O60706 1549 aa31.26■■■□□ 2.6
C1orf43-207ENST00000470180 MYO15BQ96JP2 1530 aa31.05■■■□□ 2.56
C1orf43-207ENST00000470180 NACADO15069 1562 aa30.83■■■□□ 2.53
C1orf43-207ENST00000470180 SCRIBQ14160 1630 aa30.55■■■□□ 2.48
C1orf43-207ENST00000470180 RB1CC1Q8TDY2 1594 aa30.51■■■□□ 2.48
C1orf43-207ENST00000470180 SUPT5HO00267 1087 aaKnown RBP30.21■■■□□ 2.43
C1orf43-207ENST00000470180 UNC13AQ9UPW8 1703 aa30■■■□□ 2.39
C1orf43-207ENST00000470180 CECR2Q9BXF3 1484 aa29.7■■■□□ 2.35
C1orf43-207ENST00000470180 RSF1Q96T23 1441 aaPredicted RBP29.7■■■□□ 2.34
C1orf43-207ENST00000470180 BICRAQ9NZM4 1560 aa29.68■■■□□ 2.34
C1orf43-207ENST00000470180 PABPN1Q86U42 306 aaKnown RBP eCLIP29.57■■■□□ 2.32
C1orf43-207ENST00000470180 MROH2BQ7Z745 1585 aa29.53■■■□□ 2.32
C1orf43-207ENST00000470180 BAZ1AQ9NRL2 1556 aaPredicted RBP29.4■■■□□ 2.3
C1orf43-207ENST00000470180 WIZO95785 1651 aa29.29■■■□□ 2.28
C1orf43-207ENST00000470180 SMARCA4P51532 1647 aa29.28■■■□□ 2.28
C1orf43-207ENST00000470180 CHIC1Q5VXU3 224 aa29.03■■■□□ 2.24
C1orf43-207ENST00000470180 TOP2AP11388 1531 aaKnown RBP28.92■■■□□ 2.22
C1orf43-207ENST00000470180 PEG3Q9GZU2 1588 aa28.91■■■□□ 2.22
C1orf43-207ENST00000470180 ATAD2BQ9ULI0 1458 aa28.78■■■□□ 2.2
C1orf43-207ENST00000470180 EIF4G1Q04637 1599 aaKnown RBP28.72■■■□□ 2.19
C1orf43-207ENST00000470180 CCDC88BA6NC98 1476 aa28.7■■■□□ 2.19
C1orf43-207ENST00000470180 SMARCA2P51531 1590 aa28.7■■■□□ 2.19
C1orf43-207ENST00000470180 BAZ1BQ9UIG0 1483 aaKnown RBP28.58■■■□□ 2.17
C1orf43-207ENST00000470180 NCAPD3P42695 1498 aa28.49■■■□□ 2.15
C1orf43-207ENST00000470180 HMGXB3Q12766 1538 aa28.41■■■□□ 2.14
C1orf43-207ENST00000470180 TRIM41Q8WV44 630 aa28.35■■■□□ 2.13
C1orf43-207ENST00000470180 CC2D2AQ9P2K1 1620 aa28.28■■■□□ 2.12
C1orf43-207ENST00000470180 ABCC8Q09428 1581 aa28.15■■■□□ 2.1
C1orf43-207ENST00000470180 LOC105371045A0A1W2PR82 267 aa27.98■■■□□ 2.07
C1orf43-207ENST00000470180 CFTRP13569 1480 aa27.91■■■□□ 2.06
C1orf43-207ENST00000470180 WRNQ14191 1432 aaPredicted RBP eCLIP27.9■■■□□ 2.06
C1orf43-207ENST00000470180 FAM9AQ8IZU1 332 aaPredicted RBP27.89■■■□□ 2.05
C1orf43-207ENST00000470180 SYNJ1O43426 1573 aa27.81■■■□□ 2.04
C1orf43-207ENST00000470180 CADPSQ9ULU8 1353 aa27.78■■■□□ 2.04
C1orf43-207ENST00000470180 PRDM2Q13029 1718 aa27.73■■■□□ 2.03
C1orf43-207ENST00000470180 SOGA1O94964 1423 aa27.68■■■□□ 2.02
C1orf43-207ENST00000470180 DNAJC5BQ9UF47 199 aa27.67■■■□□ 2.02
C1orf43-207ENST00000470180 TOP2BQ02880 1626 aa27.65■■■□□ 2.02
C1orf43-207ENST00000470180 BIVM-ERCC5R4GMW8 1640 aa27.62■■■□□ 2.01
C1orf43-207ENST00000470180 RUSC2Q8N2Y8 1516 aa27.6■■■□□ 2.01
C1orf43-207ENST00000470180 CUX1P39880 1505 aa27.58■■■□□ 2.01
C1orf43-207ENST00000470180 EEA1Q15075 1411 aa27.54■■■□□ 2
C1orf43-207ENST00000470180 NESP48681 1621 aa27.53■■■□□ 2
C1orf43-207ENST00000470180 EHMT2Q96KQ7 1210 aa27.51■■□□□ 1.99
C1orf43-207ENST00000470180 CSRNP3Q8WYN3 585 aa27.47■■□□□ 1.99
C1orf43-207ENST00000470180 FANCD2Q9BXW9 1451 aa27.46■■□□□ 1.99
C1orf43-207ENST00000470180 LAMC3Q9Y6N6 1575 aa27.46■■□□□ 1.99
C1orf43-207ENST00000470180 PDS5BQ9NTI5 1447 aa27.24■■□□□ 1.95
C1orf43-207ENST00000470180 CEP164Q9UPV0 1460 aa27.24■■□□□ 1.95
C1orf43-207ENST00000470180 FGD5Q6ZNL6 1462 aa27.23■■□□□ 1.95
C1orf43-207ENST00000470180 DNMBPQ6XZF7 1577 aa27.23■■□□□ 1.95
C1orf43-207ENST00000470180 KIF21BO75037 1637 aa27.21■■□□□ 1.95
C1orf43-207ENST00000470180 TOPBP1Q92547 1522 aa27.2■■□□□ 1.94
C1orf43-207ENST00000470180 GOLGA3Q08378 1498 aa27.2■■□□□ 1.94
C1orf43-207ENST00000470180 TNIKQ9UKE5 1360 aa27.19■■□□□ 1.94
C1orf43-207ENST00000470180 KIF27Q86VH2 1401 aa27.17■■□□□ 1.94
C1orf43-207ENST00000470180 KIF21AQ7Z4S6 1674 aa27.15■■□□□ 1.94
C1orf43-207ENST00000470180 URB2Q14146 1524 aaKnown RBP27.14■■□□□ 1.94
C1orf43-207ENST00000470180 UBTFP17480 764 aaKnown RBP27.12■■□□□ 1.93
C1orf43-207ENST00000470180 CUX2O14529 1486 aa27.08■■□□□ 1.93
C1orf43-207ENST00000470180 RAPGEF2Q9Y4G8 1499 aa27.08■■□□□ 1.93
C1orf43-207ENST00000470180 POLA1P09884 1462 aaPredicted RBP27.07■■□□□ 1.92
C1orf43-207ENST00000470180 PRXQ9BXM0 1461 aa27.07■■□□□ 1.92
C1orf43-207ENST00000470180 CEP162Q5TB80 1403 aa27.04■■□□□ 1.92
C1orf43-207ENST00000470180 RAD54L2Q9Y4B4 1467 aa27.03■■□□□ 1.92
C1orf43-207ENST00000470180 IGF1RP08069 1367 aa26.99■■□□□ 1.91
C1orf43-207ENST00000470180 ERICH3Q5RHP9 1530 aa26.98■■□□□ 1.91
C1orf43-207ENST00000470180 ABCA10Q8WWZ4 1543 aa26.98■■□□□ 1.91
C1orf43-207ENST00000470180 MRC2Q9UBG0 1479 aa26.88■■□□□ 1.89
C1orf43-207ENST00000470180 WDR97A6NE52 1622 aa26.87■■□□□ 1.89
C1orf43-207ENST00000470180 CARMIL1Q5VZK9 1371 aa26.82■■□□□ 1.88
C1orf43-207ENST00000470180 PCGF6Q9BYE7 350 aa26.81■■□□□ 1.88
C1orf43-207ENST00000470180 TARBP1Q13395 1621 aaKnown RBP26.79■■□□□ 1.88
C1orf43-207ENST00000470180 CLIP1P30622 1438 aa26.79■■□□□ 1.88
C1orf43-207ENST00000470180 TDRD9Q8NDG6 1382 aaKnown RBP26.75■■□□□ 1.87
C1orf43-207ENST00000470180 ABCA5Q8WWZ7 1642 aa26.75■■□□□ 1.87
C1orf43-207ENST00000470180 WDR62O43379 1518 aa26.74■■□□□ 1.87
C1orf43-207ENST00000470180 TRIM26Q12899 539 aaPredicted RBP26.73■■□□□ 1.87
C1orf43-207ENST00000470180 ERCC6Q03468 1493 aa26.72■■□□□ 1.87
C1orf43-207ENST00000470180 GAPVD1Q14C86 1478 aa26.69■■□□□ 1.86
C1orf43-207ENST00000470180 RANGAP1P46060 587 aaPredicted RBP26.67■■□□□ 1.86
C1orf43-207ENST00000470180 CUL7Q14999 1698 aa26.66■■□□□ 1.86
C1orf43-207ENST00000470180 PPARGC1BQ86YN6 1023 aaKnown RBP26.64■■□□□ 1.86
C1orf43-207ENST00000470180 THOC2Q8NI27 1593 aaKnown RBP26.64■■□□□ 1.85
C1orf43-207ENST00000470180 IFT140Q96RY7 1462 aa26.58■■□□□ 1.85
C1orf43-207ENST00000470180 VPS8Q8N3P4 1428 aa26.57■■□□□ 1.84
C1orf43-207ENST00000470180 AQRO60306 1485 aaKnown RBP eCLIP26.56■■□□□ 1.843e-6■■■□□ 18.5
C1orf43-207ENST00000470180 ARAP1Q96P48 1450 aa26.54■■□□□ 1.84
C1orf43-207ENST00000470180 PBRM1Q86U86 1689 aa26.51■■□□□ 1.83
C1orf43-207ENST00000470180 ZNF608Q9ULD9 1512 aaPredicted RBP26.51■■□□□ 1.83
C1orf43-207ENST00000470180 ARHGAP35Q9NRY4 1499 aa26.5■■□□□ 1.83
C1orf43-207ENST00000470180 GRIN2BQ13224 1484 aa26.43■■□□□ 1.82
C1orf43-207ENST00000470180 CTTNBP2Q8WZ74 1663 aa26.41■■□□□ 1.82
C1orf43-207ENST00000470180 FHAD1B1AJZ9 1412 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms