Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 MARS-217ENST00000549074 532 ntTSL 419.66■□□□□ 0.746e-7■■■□□ 15
SND1Q7KZF4 MARS-221ENST00000550449 739 ntTSL 318.86■□□□□ 0.616e-7■■■□□ 15
SND1Q7KZF4 MARS-213ENST00000548674 749 ntTSL 515.92■□□□□ 0.146e-7■■■□□ 15
SND1Q7KZF4 NBAS-208ENST00000442506 4391 ntTSL 1 (best)12.39□□□□□ -0.436e-7■■■□□ 15
SND1Q7KZF4 SARS-206ENST00000482384 804 ntTSL 210.42□□□□□ -0.746e-7■■■□□ 15
SND1Q7KZF4 NBAS-201ENST00000281513 7281 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.756e-7■■■□□ 15
SND1Q7KZF4 KIAA1324L-201ENST00000394714 3073 ntTSL 58.52□□□□□ -1.056e-7■■■□□ 15
SND1Q7KZF4 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC8.36□□□□□ -1.076e-7■■■□□ 15
SND1Q7KZF4 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC8.1□□□□□ -1.116e-7■■■□□ 15
SND1Q7KZF4 SEC24D-212ENST00000511715 2969 ntTSL 25.92□□□□□ -1.466e-7■■■□□ 15
SND1Q7KZF4 SEC24D-206ENST00000505134 3915 ntTSL 25.29□□□□□ -1.566e-7■■■□□ 15
SND1Q7KZF4 ERGIC3-205ENST00000413587 977 ntTSL 512.59□□□□□ -0.393e-8■■■□□ 15
SND1Q7KZF4 LY6E-208ENST00000520531 490 ntTSL 2 BASIC14.52□□□□□ -0.092e-8■■■□□ 15
SND1Q7KZF4 MBOAT7-212ENST00000494142 3039 ntTSL 1 (best)17.89■□□□□ 0.452e-17■■■□□ 15
SND1Q7KZF4 P4HB-221ENST00000576052 562 ntTSL 419.52■□□□□ 0.722e-22■■■□□ 14.9
SND1Q7KZF4 ST6GAL1-218ENST00000464827 494 ntTSL 210.22□□□□□ -0.771e-6■■■□□ 14.9
SND1Q7KZF4 SGSH-209ENST00000572257 581 ntTSL 411.4□□□□□ -0.581e-7■■■□□ 14.9
SND1Q7KZF4 PKM-212ENST00000564440 3016 ntTSL 1 (best)10.07□□□□□ -0.81e-11■■■□□ 14.9
SND1Q7KZF4 SLC43A3-213ENST00000529494 560 ntTSL 420.19■□□□□ 0.822e-9■■■□□ 14.9
SND1Q7KZF4 SLC43A3-207ENST00000526125 554 ntTSL 520.16■□□□□ 0.822e-9■■■□□ 14.9
SND1Q7KZF4 SLC43A3-224ENST00000533245 589 ntTSL 520.16■□□□□ 0.822e-9■■■□□ 14.9
SND1Q7KZF4 SLC43A3-210ENST00000528187 648 ntTSL 517.63■□□□□ 0.412e-9■■■□□ 14.9
SND1Q7KZF4 SLC43A3-221ENST00000532795 587 ntTSL 414.83□□□□□ -0.042e-9■■■□□ 14.9
SND1Q7KZF4 SLC43A3-223ENST00000533235 581 ntTSL 514.83□□□□□ -0.042e-9■■■□□ 14.9
SND1Q7KZF4 SLC43A3-204ENST00000524863 539 ntTSL 314.17□□□□□ -0.142e-9■■■□□ 14.9
SND1Q7KZF4 SLC43A3-218ENST00000530232 389 ntTSL 311.01□□□□□ -0.652e-9■■■□□ 14.9
SND1Q7KZF4 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC27.85■■■□□ 2.056e-8■■■□□ 14.9
SND1Q7KZF4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.06■□□□□ 0.966e-8■■■□□ 14.9
SND1Q7KZF4 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.036e-8■■■□□ 14.9
SND1Q7KZF4 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC13.68□□□□□ -0.226e-8■■■□□ 14.9
SND1Q7KZF4 SREBF1-208ENST00000469356 1323 ntTSL 323.96■■□□□ 1.431e-12■■■□□ 14.9
SND1Q7KZF4 CLN3-234ENST00000568472 1011 ntTSL 322.86■■□□□ 1.252e-7■■■□□ 14.9
SND1Q7KZF4 SREBF1-210ENST00000471445 936 ntTSL 221.57■■□□□ 1.041e-12■■■□□ 14.9
SND1Q7KZF4 CLN3-212ENST00000564574 1159 ntTSL 221.49■■□□□ 1.032e-7■■■□□ 14.9
SND1Q7KZF4 CLN3-219ENST00000565778 688 ntTSL 1 (best)21.4■■□□□ 1.022e-7■■■□□ 14.9
SND1Q7KZF4 CLN3-227ENST00000567495 769 ntTSL 519.36■□□□□ 0.692e-7■■■□□ 14.9
SND1Q7KZF4 CLN3-218ENST00000565688 650 ntTSL 319.31■□□□□ 0.682e-7■■■□□ 14.9
SND1Q7KZF4 CLN3-243ENST00000635973 1084 ntTSL 518.79■□□□□ 0.62e-7■■■□□ 14.9
SND1Q7KZF4 CLN3-236ENST00000568558 634 ntTSL 515.41■□□□□ 0.062e-7■■■□□ 14.9
SND1Q7KZF4 CLN3-222ENST00000566083 1409 ntTSL 215.38■□□□□ 0.052e-7■■■□□ 14.9
SND1Q7KZF4 CLN3-213ENST00000565047 461 ntTSL 1 (best)15.26■□□□□ 0.032e-7■■■□□ 14.9
SND1Q7KZF4 CLN3-235ENST00000568497 758 ntTSL 314.26□□□□□ -0.132e-7■■■□□ 14.9
SND1Q7KZF4 COL9A3-211ENST00000477612 635 ntTSL 322.43■■□□□ 1.181e-17■■■□□ 14.9
SND1Q7KZF4 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.461e-6■■■□□ 14.9
SND1Q7KZF4 PCSK6-205ENST00000558433 543 ntTSL 413.36□□□□□ -0.273e-13■■■□□ 14.9
SND1Q7KZF4 PCSK6-212ENST00000560785 507 ntTSL 412.73□□□□□ -0.373e-13■■■□□ 14.9
SND1Q7KZF4 PHB-211ENST00000511933 852 ntTSL 212.14□□□□□ -0.473e-13■■■□□ 14.9
SND1Q7KZF4 PCSK6-206ENST00000558864 3868 ntTSL 27.71□□□□□ -1.183e-13■■■□□ 14.9
SND1Q7KZF4 ERO1A-208ENST00000556358 951 ntTSL 28.88□□□□□ -0.992e-6■■■□□ 14.9
SND1Q7KZF4 SLC39A4-203ENST00000526658 583 ntTSL 320.36■□□□□ 0.855e-10■■■□□ 14.9
SND1Q7KZF4 NRP1-213ENST00000455749 518 ntTSL 36.31□□□□□ -1.45e-6■■■□□ 14.9
SND1Q7KZF4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.372e-9■■■□□ 14.9
SND1Q7KZF4 TMEM101-205ENST00000589334 1830 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.252e-9■■■□□ 14.9
SND1Q7KZF4 SSR1-209ENST00000488834 585 ntTSL 47.18□□□□□ -1.264e-8■■■□□ 14.9
SND1Q7KZF4 SLC20A1-204ENST00000433924 638 ntTSL 412.94□□□□□ -0.345e-7■■■□□ 14.9
SND1Q7KZF4 SLC20A1-202ENST00000413135 584 ntTSL 58.3□□□□□ -1.085e-7■■■□□ 14.9
SND1Q7KZF4 COL9A3-205ENST00000466192 2194 ntTSL 219.49■□□□□ 0.714e-20■■■□□ 14.9
SND1Q7KZF4 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.51e-11■■■□□ 14.9
SND1Q7KZF4 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.41■□□□□ 0.221e-11■■■□□ 14.9
SND1Q7KZF4 ARL6IP1-205ENST00000563861 948 ntTSL 1 (best)8.88□□□□□ -0.991e-11■■■□□ 14.9
SND1Q7KZF4 ARL6IP1-204ENST00000562819 578 ntTSL 5 BASIC8.88□□□□□ -0.991e-11■■■□□ 14.9
SND1Q7KZF4 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.251e-11■■■□□ 14.9
SND1Q7KZF4 AARS-201ENST00000261772 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.31e-7■■■□□ 14.8
SND1Q7KZF4 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.311e-6■■■□□ 14.8
SND1Q7KZF4 IGSF1-201ENST00000361420 4378 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.591e-6■■■□□ 14.8
SND1Q7KZF4 IGSF1-206ENST00000370910 4406 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.731e-6■■■□□ 14.8
SND1Q7KZF4 IGSF1-205ENST00000370904 5413 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.81e-6■■■□□ 14.8
SND1Q7KZF4 SPP1-205ENST00000505146 252 ntTSL 36.3□□□□□ -1.41e-22■■■□□ 14.8
SND1Q7KZF4 AL136295.4-201ENST00000561419 4351 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.39e-7■■■□□ 14.8
SND1Q7KZF4 SERPINF2-205ENST00000453723 838 ntTSL 315.6■□□□□ 0.093e-21■■■□□ 14.8
SND1Q7KZF4 SLC13A5-209ENST00000574580 5398 nt10.31□□□□□ -0.761e-11■■■□□ 14.8
SND1Q7KZF4 TMED7-TICAM2-203ENST00000514548 736 ntTSL 26.6□□□□□ -1.351e-10■■■□□ 14.8
SND1Q7KZF4 PLOD1-201ENST00000196061 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.47e-9■■■□□ 14.8
SND1Q7KZF4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.08■□□□□ 0.975e-8■■■□□ 14.8
SND1Q7KZF4 YIF1B-212ENST00000589644 1917 ntTSL 220.04■□□□□ 0.85e-8■■■□□ 14.8
SND1Q7KZF4 YIF1B-205ENST00000585563 1118 ntTSL 318.49■□□□□ 0.555e-8■■■□□ 14.8
SND1Q7KZF4 YIF1B-211ENST00000589247 734 ntTSL 215.44■□□□□ 0.065e-8■■■□□ 14.8
SND1Q7KZF4 YIF1B-209ENST00000588002 575 ntTSL 515□□□□□ -0.015e-8■■■□□ 14.8
SND1Q7KZF4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.911e-11■■■□□ 14.8
SND1Q7KZF4 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.181e-11■■■□□ 14.8
SND1Q7KZF4 PLCXD1-203ENST00000399012 5287 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.261e-11■■■□□ 14.8
SND1Q7KZF4 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.27■□□□□ 0.523e-6■■■□□ 14.8
SND1Q7KZF4 CARS-214ENST00000529772 2637 ntTSL 2 BASIC15.2■□□□□ 0.023e-6■■■□□ 14.8
SND1Q7KZF4 LDLR-213ENST00000560502 509 ntTSL 214.31□□□□□ -0.124e-12■■■□□ 14.8
SND1Q7KZF4 CARS-201ENST00000278224 2491 ntTSL 1 (best) BASIC13.9□□□□□ -0.183e-6■■■□□ 14.8
SND1Q7KZF4 CARS-202ENST00000380525 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.253e-6■■■□□ 14.8
SND1Q7KZF4 CARS-212ENST00000526890 5732 ntTSL 212.34□□□□□ -0.433e-6■■■□□ 14.8
SND1Q7KZF4 CARS-215ENST00000531387 2805 ntTSL 211.73□□□□□ -0.533e-6■■■□□ 14.8
SND1Q7KZF4 NME1-210ENST00000512768 1056 ntTSL 1 (best)18.68■□□□□ 0.581e-19■■■□□ 14.8
SND1Q7KZF4 MRPS18B-208ENST00000472267 1610 ntTSL 1 (best)11.2□□□□□ -0.627e-9■■■□□ 14.8
SND1Q7KZF4 MRPS18B-206ENST00000259873 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.637e-9■■■□□ 14.8
SND1Q7KZF4 MRPS18B-207ENST00000472229 1409 ntTSL 39.39□□□□□ -0.917e-9■■■□□ 14.8
SND1Q7KZF4 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.345e-7■■■□□ 14.8
SND1Q7KZF4 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.518e-17■■■□□ 14.8
SND1Q7KZF4 SLC4A2-203ENST00000460010 551 ntTSL 416.68■□□□□ 0.261e-8■■■□□ 14.8
SND1Q7KZF4 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.118e-17■■■□□ 14.8
SND1Q7KZF4 RPL19-206ENST00000580333 577 ntTSL 211.5□□□□□ -0.578e-17■■■□□ 14.8
SND1Q7KZF4 RPL19-201ENST00000225430 732 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.658e-17■■■□□ 14.8
SND1Q7KZF4 RPL19-205ENST00000579374 690 ntAPPRIS ALT1 TSL 2 BASIC10.99□□□□□ -0.658e-17■■■□□ 14.8
SND1Q7KZF4 RPL19-208ENST00000585199 402 ntTSL 210.54□□□□□ -0.728e-17■■■□□ 14.8
Retrieved 100 of 13,567 protein–RNA pairs in 138.3 ms