RNA–Protein interactions for RNA: ENST00000511715.1

SEC24D-212, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 2

Gene SEC24D, Length 2,969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-212ENST00000511715 NISCHQ9Y2I1 1504 aa12.23□□□□□ -0.45
SEC24D-212ENST00000511715 CHIC1Q5VXU3 224 aa11.73□□□□□ -0.53
SEC24D-212ENST00000511715 AEBP2Q6ZN18 517 aaPredicted RBP11.56□□□□□ -0.56
SEC24D-212ENST00000511715 CCDC180Q9P1Z9 1646 aa11.12□□□□□ -0.63
SEC24D-212ENST00000511715 DCAF1Q9Y4B6 1507 aa10.56□□□□□ -0.72
SEC24D-212ENST00000511715 PHF23Q9BUL5 403 aaPredicted RBP10.56□□□□□ -0.72
SEC24D-212ENST00000511715 MYO15BQ96JP2 1530 aa10.47□□□□□ -0.73
SEC24D-212ENST00000511715 ZCCHC6Q5VYS8 1495 aaKnown RBP10.42□□□□□ -0.74
SEC24D-212ENST00000511715 NACADO15069 1562 aa10.05□□□□□ -0.8
SEC24D-212ENST00000511715 SHROOM4Q9ULL8 1493 aa9.89□□□□□ -0.83
SEC24D-212ENST00000511715 ABCC9O60706 1549 aa9.86□□□□□ -0.83
SEC24D-212ENST00000511715 UNC13AQ9UPW8 1703 aa9.85□□□□□ -0.83
SEC24D-212ENST00000511715 RB1CC1Q8TDY2 1594 aa9.82□□□□□ -0.84
SEC24D-212ENST00000511715 PLPPR3Q6T4P5 718 aa9.75□□□□□ -0.85
SEC24D-212ENST00000511715 EHMT2Q96KQ7 1210 aa9.69□□□□□ -0.86
SEC24D-212ENST00000511715 PEG3Q9GZU2 1588 aa9.64□□□□□ -0.87
SEC24D-212ENST00000511715 BICRAQ9NZM4 1560 aa9.57□□□□□ -0.88
SEC24D-212ENST00000511715 BAZ1AQ9NRL2 1556 aaPredicted RBP9.54□□□□□ -0.88
SEC24D-212ENST00000511715 EIF4G1Q04637 1599 aaKnown RBP9.53□□□□□ -0.88
SEC24D-212ENST00000511715 SCRIBQ14160 1630 aa9.53□□□□□ -0.88
SEC24D-212ENST00000511715 SMARCA2P51531 1590 aa9.46□□□□□ -0.89
SEC24D-212ENST00000511715 SMARCA4P51532 1647 aa9.46□□□□□ -0.89
SEC24D-212ENST00000511715 KCNA4P22459 653 aa9.45□□□□□ -0.9
SEC24D-212ENST00000511715 SENP3Q9H4L4 574 aaPredicted RBP9.44□□□□□ -0.9
SEC24D-212ENST00000511715 PRDM2Q13029 1718 aa9.44□□□□□ -0.9
SEC24D-212ENST00000511715 ADRA2BP18089 450 aa9.42□□□□□ -0.9
SEC24D-212ENST00000511715 TOP2AP11388 1531 aaKnown RBP9.38□□□□□ -0.91
SEC24D-212ENST00000511715 HMGXB3Q12766 1538 aa9.34□□□□□ -0.91
SEC24D-212ENST00000511715 RSF1Q96T23 1441 aaPredicted RBP9.33□□□□□ -0.92
SEC24D-212ENST00000511715 MROH2BQ7Z745 1585 aa9.28□□□□□ -0.92
SEC24D-212ENST00000511715 WIZO95785 1651 aa9.26□□□□□ -0.93
SEC24D-212ENST00000511715 CSRNP3Q8WYN3 585 aa9.18□□□□□ -0.94
SEC24D-212ENST00000511715 CECR2Q9BXF3 1484 aa9.17□□□□□ -0.94
SEC24D-212ENST00000511715 PPP6R1Q9UPN7 881 aa9.16□□□□□ -0.94
SEC24D-212ENST00000511715 BIVM-ERCC5R4GMW8 1640 aa9.14□□□□□ -0.95
SEC24D-212ENST00000511715 NCAPD3P42695 1498 aa9.12□□□□□ -0.95
SEC24D-212ENST00000511715 ATAD2BQ9ULI0 1458 aa9.09□□□□□ -0.95
SEC24D-212ENST00000511715 TOP2BQ02880 1626 aa8.99□□□□□ -0.97
SEC24D-212ENST00000511715 CCDC88BA6NC98 1476 aa8.99□□□□□ -0.97
SEC24D-212ENST00000511715 SLC4A1APQ9BWU0 796 aaKnown RBP8.99□□□□□ -0.97
SEC24D-212ENST00000511715 WDR97A6NE52 1622 aa8.98□□□□□ -0.97
SEC24D-212ENST00000511715 KIF21BO75037 1637 aa8.95□□□□□ -0.98
SEC24D-212ENST00000511715 BAZ1BQ9UIG0 1483 aaKnown RBP8.95□□□□□ -0.98
SEC24D-212ENST00000511715 EEA1Q15075 1411 aa8.93□□□□□ -0.98
SEC24D-212ENST00000511715 CC2D2AQ9P2K1 1620 aa8.91□□□□□ -0.98
SEC24D-212ENST00000511715 LAMC3Q9Y6N6 1575 aa8.91□□□□□ -0.98
SEC24D-212ENST00000511715 CFTRP13569 1480 aa8.91□□□□□ -0.98
SEC24D-212ENST00000511715 SLC24A1O60721 1099 aa8.88□□□□□ -0.99
SEC24D-212ENST00000511715 FOXD1Q16676 465 aa8.87□□□□□ -0.99
SEC24D-212ENST00000511715 ERICH3Q5RHP9 1530 aa8.85□□□□□ -0.99
SEC24D-212ENST00000511715 SYNJ1O43426 1573 aa8.85□□□□□ -0.99
SEC24D-212ENST00000511715 KIF21AQ7Z4S6 1674 aa8.8□□□□□ -1
SEC24D-212ENST00000511715 DNMBPQ6XZF7 1577 aa8.79□□□□□ -1
SEC24D-212ENST00000511715 ABCC8Q09428 1581 aa8.77□□□□□ -1
SEC24D-212ENST00000511715 ZBTB22O15209 634 aa8.77□□□□□ -1.01
SEC24D-212ENST00000511715 CUL7Q14999 1698 aa8.77□□□□□ -1.01
SEC24D-212ENST00000511715 PPP4R3CPQ6ZMV5 832 aa8.76□□□□□ -1.01
SEC24D-212ENST00000511715 RTN4Q9NQC3 1192 aaKnown RBP8.76□□□□□ -1.01
SEC24D-212ENST00000511715 ABCA5Q8WWZ7 1642 aa8.75□□□□□ -1.01
SEC24D-212ENST00000511715 CUX1P39880 1505 aa8.74□□□□□ -1.01
SEC24D-212ENST00000511715 WRNQ14191 1432 aaPredicted RBP eCLIP8.73□□□□□ -1.01
SEC24D-212ENST00000511715 DCAF8L2P0C7V8 631 aa8.71□□□□□ -1.01
SEC24D-212ENST00000511715 CTTNBP2Q8WZ74 1663 aa8.7□□□□□ -1.02
SEC24D-212ENST00000511715 TARBP1Q13395 1621 aaKnown RBP8.68□□□□□ -1.02
SEC24D-212ENST00000511715 WDR62O43379 1518 aa8.67□□□□□ -1.02
SEC24D-212ENST00000511715 ABCA10Q8WWZ4 1543 aa8.66□□□□□ -1.02
SEC24D-212ENST00000511715 PRXQ9BXM0 1461 aa8.66□□□□□ -1.02
SEC24D-212ENST00000511715 PBRM1Q86U86 1689 aa8.66□□□□□ -1.02
SEC24D-212ENST00000511715 THOC2Q8NI27 1593 aaKnown RBP8.66□□□□□ -1.02
SEC24D-212ENST00000511715 NPM3O75607 178 aaKnown RBP8.65□□□□□ -1.02
SEC24D-212ENST00000511715 CADPSQ9ULU8 1353 aa8.65□□□□□ -1.02
SEC24D-212ENST00000511715 SUPT5HO00267 1087 aaKnown RBP8.65□□□□□ -1.02
SEC24D-212ENST00000511715 CEP164Q9UPV0 1460 aa8.64□□□□□ -1.03
SEC24D-212ENST00000511715 MAP3K1Q13233 1512 aa8.64□□□□□ -1.03
SEC24D-212ENST00000511715 CFAP43Q8NDM7 1665 aa8.62□□□□□ -1.03
SEC24D-212ENST00000511715 GOLGA3Q08378 1498 aa8.62□□□□□ -1.03
SEC24D-212ENST00000511715 TNIKQ9UKE5 1360 aa8.59□□□□□ -1.03
SEC24D-212ENST00000511715 SAMD9Q5K651 1589 aa8.59□□□□□ -1.03
SEC24D-212ENST00000511715 TOPBP1Q92547 1522 aa8.59□□□□□ -1.04
SEC24D-212ENST00000511715 EFCAB5A4FU69 1503 aa8.58□□□□□ -1.04
SEC24D-212ENST00000511715 FANCD2Q9BXW9 1451 aa8.57□□□□□ -1.04
SEC24D-212ENST00000511715 ADAMTS12P58397 1594 aa8.55□□□□□ -1.04
SEC24D-212ENST00000511715 NCBP3Q53F19 620 aaKnown RBP8.54□□□□□ -1.04
SEC24D-212ENST00000511715 URB2Q14146 1524 aaKnown RBP8.54□□□□□ -1.04
SEC24D-212ENST00000511715 AQRO60306 1485 aaKnown RBP eCLIP8.52□□□□□ -1.04
SEC24D-212ENST00000511715 FGD5Q6ZNL6 1462 aa8.52□□□□□ -1.05
SEC24D-212ENST00000511715 MRC2Q9UBG0 1479 aa8.51□□□□□ -1.05
SEC24D-212ENST00000511715 PABPN1Q86U42 306 aaKnown RBP eCLIP8.51□□□□□ -1.05
SEC24D-212ENST00000511715 POLA1P09884 1462 aaPredicted RBP8.5□□□□□ -1.05
SEC24D-212ENST00000511715 PIAS4Q8N2W9 510 aaPredicted RBP8.5□□□□□ -1.05
SEC24D-212ENST00000511715 PDS5BQ9NTI5 1447 aa8.5□□□□□ -1.05
SEC24D-212ENST00000511715 AMER1Q5JTC6 1135 aaPredicted RBP8.49□□□□□ -1.05
SEC24D-212ENST00000511715 KIF27Q86VH2 1401 aa8.49□□□□□ -1.05
SEC24D-212ENST00000511715 SOGA1O94964 1423 aa8.46□□□□□ -1.06
SEC24D-212ENST00000511715 LRRIQ1Q96JM4 1722 aa8.44□□□□□ -1.06
SEC24D-212ENST00000511715 IFT140Q96RY7 1462 aa8.44□□□□□ -1.06
SEC24D-212ENST00000511715 SHROOM2Q13796 1616 aa8.44□□□□□ -1.06
SEC24D-212ENST00000511715 RUSC2Q8N2Y8 1516 aa8.43□□□□□ -1.06
SEC24D-212ENST00000511715 RAPGEF2Q9Y4G8 1499 aa8.42□□□□□ -1.06
SEC24D-212ENST00000511715 UGGT2Q9NYU1 1516 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms