RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 NISCHQ9Y2I1 1504 aa52.05■■■■■ 5.92
SREBF1-210ENST00000471445 CCDC180Q9P1Z9 1646 aa46.62■■■■■ 5.05
SREBF1-210ENST00000471445 ABCC9O60706 1549 aa45.92■■■■■ 4.94
SREBF1-210ENST00000471445 RB1CC1Q8TDY2 1594 aa44.03■■■■■ 4.64
SREBF1-210ENST00000471445 NACADO15069 1562 aa43.86■■■■■ 4.61
SREBF1-210ENST00000471445 MYO15BQ96JP2 1530 aa43.47■■■■■ 4.55
SREBF1-210ENST00000471445 DCAF8L2P0C7V8 631 aa43.42■■■■■ 4.54
SREBF1-210ENST00000471445 ZCCHC6Q5VYS8 1495 aaKnown RBP43.31■■■■■ 4.52
SREBF1-210ENST00000471445 UNC13AQ9UPW8 1703 aa43.15■■■■■ 4.5
SREBF1-210ENST00000471445 DCAF1Q9Y4B6 1507 aa43.1■■■■■ 4.49
SREBF1-210ENST00000471445 BICRAQ9NZM4 1560 aa42.75■■■■■ 4.43
SREBF1-210ENST00000471445 PABPN1Q86U42 306 aaKnown RBP eCLIP42.71■■■■■ 4.43
SREBF1-210ENST00000471445 DNAJC5BQ9UF47 199 aa42.52■■■■■ 4.4
SREBF1-210ENST00000471445 SCRIBQ14160 1630 aa42.41■■■■■ 4.38
SREBF1-210ENST00000471445 SHROOM4Q9ULL8 1493 aa42.28■■■■■ 4.36
SREBF1-210ENST00000471445 EIF4G1Q04637 1599 aaKnown RBP41.64■■■■■ 4.26
SREBF1-210ENST00000471445 CC2D2AQ9P2K1 1620 aa41.59■■■■■ 4.25
SREBF1-210ENST00000471445 CECR2Q9BXF3 1484 aa41.33■■■■■ 4.21
SREBF1-210ENST00000471445 SMARCA4P51532 1647 aa40.55■■■■■ 4.08
SREBF1-210ENST00000471445 NCAPD3P42695 1498 aa40.43■■■■■ 4.06
SREBF1-210ENST00000471445 BAZ1AQ9NRL2 1556 aaPredicted RBP40.4■■■■■ 4.06
SREBF1-210ENST00000471445 ATAD2BQ9ULI0 1458 aa40.39■■■■■ 4.06
SREBF1-210ENST00000471445 SMARCA2P51531 1590 aa40.34■■■■■ 4.05
SREBF1-210ENST00000471445 HMGXB3Q12766 1538 aa40.27■■■■■ 4.04
SREBF1-210ENST00000471445 PEG3Q9GZU2 1588 aa40.18■■■■■ 4.02
SREBF1-210ENST00000471445 MROH2BQ7Z745 1585 aa40.1■■■■■ 4.01
SREBF1-210ENST00000471445 BAZ1BQ9UIG0 1483 aaKnown RBP40.02■■■■■ 4
SREBF1-210ENST00000471445 WIZO95785 1651 aa39.67■■■■□ 3.94
SREBF1-210ENST00000471445 NESP48681 1621 aa39.61■■■■□ 3.93
SREBF1-210ENST00000471445 ERCC6Q03468 1493 aa39.61■■■■□ 3.93
SREBF1-210ENST00000471445 LAMC3Q9Y6N6 1575 aa39.5■■■■□ 3.91
SREBF1-210ENST00000471445 CUX2O14529 1486 aa39.43■■■■□ 3.9
SREBF1-210ENST00000471445 RSF1Q96T23 1441 aaPredicted RBP39.42■■■■□ 3.9
SREBF1-210ENST00000471445 THOC2Q8NI27 1593 aaKnown RBP39.25■■■■□ 3.87
SREBF1-210ENST00000471445 KIF21AQ7Z4S6 1674 aa39.24■■■■□ 3.87
SREBF1-210ENST00000471445 TOP2AP11388 1531 aaKnown RBP39.24■■■■□ 3.87
SREBF1-210ENST00000471445 DNAJC5Q9H3Z4 198 aa39.22■■■■□ 3.87
SREBF1-210ENST00000471445 CADPSQ9ULU8 1353 aa39.19■■■■□ 3.86
SREBF1-210ENST00000471445 PDS5BQ9NTI5 1447 aa39.15■■■■□ 3.86
SREBF1-210ENST00000471445 CFTRP13569 1480 aa38.9■■■■□ 3.82
SREBF1-210ENST00000471445 MRC2Q9UBG0 1479 aa38.85■■■■□ 3.81
SREBF1-210ENST00000471445 WDR62O43379 1518 aa38.79■■■■□ 3.8
SREBF1-210ENST00000471445 CEP164Q9UPV0 1460 aa38.79■■■■□ 3.8
SREBF1-210ENST00000471445 FANCD2Q9BXW9 1451 aa38.78■■■■□ 3.8
SREBF1-210ENST00000471445 PRDM2Q13029 1718 aa38.75■■■■□ 3.79
SREBF1-210ENST00000471445 CCDC88BA6NC98 1476 aa38.69■■■■□ 3.78
SREBF1-210ENST00000471445 URB2Q14146 1524 aaKnown RBP38.45■■■■□ 3.75
SREBF1-210ENST00000471445 TOPBP1Q92547 1522 aa38.12■■■■□ 3.69
SREBF1-210ENST00000471445 DNMBPQ6XZF7 1577 aa38.07■■■■□ 3.69
SREBF1-210ENST00000471445 ABCC8Q09428 1581 aa38.06■■■■□ 3.68
SREBF1-210ENST00000471445 IFT140Q96RY7 1462 aa37.99■■■■□ 3.67
SREBF1-210ENST00000471445 SUPT5HO00267 1087 aaKnown RBP37.88■■■■□ 3.65
SREBF1-210ENST00000471445 ZNF608Q9ULD9 1512 aaPredicted RBP37.86■■■■□ 3.65
SREBF1-210ENST00000471445 TARBP1Q13395 1621 aaKnown RBP37.79■■■■□ 3.64
SREBF1-210ENST00000471445 EIF4G3O43432 1585 aaKnown RBP37.77■■■■□ 3.64
SREBF1-210ENST00000471445 POLA1P09884 1462 aaPredicted RBP37.77■■■■□ 3.64
SREBF1-210ENST00000471445 CUX1P39880 1505 aa37.66■■■■□ 3.62
SREBF1-210ENST00000471445 FGD5Q6ZNL6 1462 aa37.6■■■■□ 3.61
SREBF1-210ENST00000471445 RAD54L2Q9Y4B4 1467 aa37.57■■■■□ 3.6
SREBF1-210ENST00000471445 OSCARQ8IYS5 282 aa37.54■■■■□ 3.6
SREBF1-210ENST00000471445 AQRO60306 1485 aaKnown RBP eCLIP37.52■■■■□ 3.62e-12■■■■■ 34.1
SREBF1-210ENST00000471445 SOGA1O94964 1423 aa37.52■■■■□ 3.6
SREBF1-210ENST00000471445 WDR97A6NE52 1622 aa37.5■■■■□ 3.59
SREBF1-210ENST00000471445 CHD1O14646 1710 aa37.41■■■■□ 3.58
SREBF1-210ENST00000471445 TDRD9Q8NDG6 1382 aaKnown RBP37.35■■■■□ 3.57
SREBF1-210ENST00000471445 BIVM-ERCC5R4GMW8 1640 aa37.28■■■■□ 3.56
SREBF1-210ENST00000471445 SNAPC4Q5SXM2 1469 aa37.24■■■■□ 3.55
SREBF1-210ENST00000471445 TOP2BQ02880 1626 aa37.24■■■■□ 3.55
SREBF1-210ENST00000471445 ABCA10Q8WWZ4 1543 aa37.23■■■■□ 3.55
SREBF1-210ENST00000471445 PBRM1Q86U86 1689 aa37.21■■■■□ 3.55
SREBF1-210ENST00000471445 TRIM41Q8WV44 630 aa37.2■■■■□ 3.55
SREBF1-210ENST00000471445 SYNJ1O43426 1573 aa37.2■■■■□ 3.55
SREBF1-210ENST00000471445 GRIN2BQ13224 1484 aa37.2■■■■□ 3.54
SREBF1-210ENST00000471445 RIMBP3CA6NJZ7 1639 aa37.19■■■■□ 3.54
SREBF1-210ENST00000471445 RIMBP3BA6NNM3 1639 aa37.19■■■■□ 3.54
SREBF1-210ENST00000471445 ABCA5Q8WWZ7 1642 aa37.19■■■■□ 3.54
SREBF1-210ENST00000471445 RIMBP3Q9UFD9 1639 aa37.19■■■■□ 3.54
SREBF1-210ENST00000471445 MAGI1Q96QZ7 1491 aaPredicted RBP37.19■■■■□ 3.54
SREBF1-210ENST00000471445 WRNQ14191 1432 aaPredicted RBP eCLIP37.19■■■■□ 3.54
SREBF1-210ENST00000471445 GAPVD1Q14C86 1478 aa37.12■■■■□ 3.53
SREBF1-210ENST00000471445 ARHGEF11O15085 1522 aa37.1■■■■□ 3.53
SREBF1-210ENST00000471445 FBLN2P98095 1184 aa37.06■■■■□ 3.52
SREBF1-210ENST00000471445 SYNJ2O15056 1496 aa37.02■■■■□ 3.52
SREBF1-210ENST00000471445 CLASP1Q7Z460 1538 aa36.98■■■■□ 3.51
SREBF1-210ENST00000471445 CHMP7Q8WUX9 453 aaPredicted RBP36.91■■■■□ 3.5
SREBF1-210ENST00000471445 ADAMTS12P58397 1594 aa36.87■■■■□ 3.49
SREBF1-210ENST00000471445 ARAP1Q96P48 1450 aa36.78■■■■□ 3.48
SREBF1-210ENST00000471445 ERICH3Q5RHP9 1530 aa36.78■■■■□ 3.48
SREBF1-210ENST00000471445 GRIN2AQ12879 1464 aa36.75■■■■□ 3.47
SREBF1-210ENST00000471445 FHAD1B1AJZ9 1412 aa36.68■■■■□ 3.46
SREBF1-210ENST00000471445 CEP170Q5SW79 1584 aa36.62■■■■□ 3.45
SREBF1-210ENST00000471445 NUP160Q12769 1436 aa36.61■■■■□ 3.45
SREBF1-210ENST00000471445 CYB5RLQ6IPT4 315 aa36.61■■■■□ 3.45
SREBF1-210ENST00000471445 SHROOM2Q13796 1616 aa36.47■■■■□ 3.43
SREBF1-210ENST00000471445 KIF27Q86VH2 1401 aa36.42■■■■□ 3.42
SREBF1-210ENST00000471445 CUL7Q14999 1698 aa36.39■■■■□ 3.42
SREBF1-210ENST00000471445 ERCC6L2Q5T890 1561 aa36.39■■■■□ 3.42
SREBF1-210ENST00000471445 RUSC2Q8N2Y8 1516 aa36.34■■■■□ 3.41
SREBF1-210ENST00000471445 IGF1RP08069 1367 aa36.3■■■■□ 3.4
SREBF1-210ENST00000471445 PRG4Q92954 1404 aaPredicted RBP36.13■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms