RNA–Protein interactions for RNA: ENST00000576052.1

P4HB-221, Transcript of prolyl 4-hydroxylase subunit beta, humanhuman

TSL 4

Gene P4HB, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
P4HB-221ENST00000576052 NISCHQ9Y2I1 1504 aa47.65■■■■■ 5.22
P4HB-221ENST00000576052 CCDC180Q9P1Z9 1646 aa42.81■■■■■ 4.44
P4HB-221ENST00000576052 ABCC9O60706 1549 aa42.59■■■■■ 4.41
P4HB-221ENST00000576052 RB1CC1Q8TDY2 1594 aa40.65■■■■■ 4.1
P4HB-221ENST00000576052 NACADO15069 1562 aa40.4■■■■■ 4.06
P4HB-221ENST00000576052 DCAF8L2P0C7V8 631 aa39.98■■■■□ 3.99
P4HB-221ENST00000576052 MYO15BQ96JP2 1530 aa39.91■■■■□ 3.98
P4HB-221ENST00000576052 DNAJC5BQ9UF47 199 aa39.9■■■■□ 3.98
P4HB-221ENST00000576052 UNC13AQ9UPW8 1703 aa39.85■■■■□ 3.97
P4HB-221ENST00000576052 PABPN1Q86U42 306 aaKnown RBP eCLIP39.6■■■■□ 3.93
P4HB-221ENST00000576052 ZCCHC6Q5VYS8 1495 aaKnown RBP39.51■■■■□ 3.92
P4HB-221ENST00000576052 BICRAQ9NZM4 1560 aa39.5■■■■□ 3.91
P4HB-221ENST00000576052 DCAF1Q9Y4B6 1507 aa39.41■■■■□ 3.9
P4HB-221ENST00000576052 SHROOM4Q9ULL8 1493 aa38.98■■■■□ 3.83
P4HB-221ENST00000576052 SCRIBQ14160 1630 aa38.9■■■■□ 3.82
P4HB-221ENST00000576052 CC2D2AQ9P2K1 1620 aa38.56■■■■□ 3.76
P4HB-221ENST00000576052 EIF4G1Q04637 1599 aaKnown RBP38.49■■■■□ 3.75
P4HB-221ENST00000576052 CECR2Q9BXF3 1484 aa38.37■■■■□ 3.73
P4HB-221ENST00000576052 NCAPD3P42695 1498 aa37.28■■■■□ 3.56
P4HB-221ENST00000576052 SMARCA4P51532 1647 aa37.18■■■■□ 3.54
P4HB-221ENST00000576052 ATAD2BQ9ULI0 1458 aa37.16■■■■□ 3.54
P4HB-221ENST00000576052 SMARCA2P51531 1590 aa37.07■■■■□ 3.52
P4HB-221ENST00000576052 HMGXB3Q12766 1538 aa37.04■■■■□ 3.52
P4HB-221ENST00000576052 BAZ1AQ9NRL2 1556 aaPredicted RBP36.98■■■■□ 3.51
P4HB-221ENST00000576052 PEG3Q9GZU2 1588 aa36.86■■■■□ 3.49
P4HB-221ENST00000576052 BAZ1BQ9UIG0 1483 aaKnown RBP36.77■■■■□ 3.48
P4HB-221ENST00000576052 CUX2O14529 1486 aa36.74■■■■□ 3.47
P4HB-221ENST00000576052 ERCC6Q03468 1493 aa36.74■■■■□ 3.47
P4HB-221ENST00000576052 MROH2BQ7Z745 1585 aa36.7■■■■□ 3.47
P4HB-221ENST00000576052 NESP48681 1621 aa36.63■■■■□ 3.45
P4HB-221ENST00000576052 DNAJC5Q9H3Z4 198 aa36.59■■■■□ 3.45
P4HB-221ENST00000576052 LAMC3Q9Y6N6 1575 aa36.44■■■■□ 3.42
P4HB-221ENST00000576052 THOC2Q8NI27 1593 aaKnown RBP36.33■■■■□ 3.41
P4HB-221ENST00000576052 WIZO95785 1651 aa36.29■■■■□ 3.4
P4HB-221ENST00000576052 KIF21AQ7Z4S6 1674 aa36.25■■■■□ 3.39
P4HB-221ENST00000576052 PDS5BQ9NTI5 1447 aa36.16■■■■□ 3.38
P4HB-221ENST00000576052 CADPSQ9ULU8 1353 aa36.11■■■■□ 3.37
P4HB-221ENST00000576052 RSF1Q96T23 1441 aaPredicted RBP35.94■■■■□ 3.34
P4HB-221ENST00000576052 MRC2Q9UBG0 1479 aa35.87■■■■□ 3.33
P4HB-221ENST00000576052 WDR62O43379 1518 aa35.83■■■■□ 3.33
P4HB-221ENST00000576052 TOP2AP11388 1531 aaKnown RBP35.83■■■■□ 3.33
P4HB-221ENST00000576052 CFTRP13569 1480 aa35.74■■■■□ 3.31
P4HB-221ENST00000576052 CEP164Q9UPV0 1460 aa35.73■■■■□ 3.31
P4HB-221ENST00000576052 FANCD2Q9BXW9 1451 aa35.69■■■■□ 3.3
P4HB-221ENST00000576052 PRDM2Q13029 1718 aa35.53■■■■□ 3.28
P4HB-221ENST00000576052 URB2Q14146 1524 aaKnown RBP35.42■■■■□ 3.26
P4HB-221ENST00000576052 CCDC88BA6NC98 1476 aa35.39■■■■□ 3.26
P4HB-221ENST00000576052 TOPBP1Q92547 1522 aa35.06■■■■□ 3.2
P4HB-221ENST00000576052 IFT140Q96RY7 1462 aa35.03■■■■□ 3.2
P4HB-221ENST00000576052 OSCARQ8IYS5 282 aa34.99■■■■□ 3.19
P4HB-221ENST00000576052 ABCC8Q09428 1581 aa34.99■■■■□ 3.19
P4HB-221ENST00000576052 ZNF608Q9ULD9 1512 aaPredicted RBP34.96■■■■□ 3.19
P4HB-221ENST00000576052 DNMBPQ6XZF7 1577 aa34.96■■■■□ 3.19
P4HB-221ENST00000576052 TRIM41Q8WV44 630 aa34.9■■■■□ 3.18
P4HB-221ENST00000576052 EIF4G3O43432 1585 aaKnown RBP34.81■■■■□ 3.16
P4HB-221ENST00000576052 TARBP1Q13395 1621 aaKnown RBP34.79■■■■□ 3.16
P4HB-221ENST00000576052 POLA1P09884 1462 aaPredicted RBP34.7■■■■□ 3.15
P4HB-221ENST00000576052 AQRO60306 1485 aaKnown RBP eCLIP34.63■■■■□ 3.135e-9■■■■□ 23.7
P4HB-221ENST00000576052 RIMBP3CA6NJZ7 1639 aa34.63■■■■□ 3.13
P4HB-221ENST00000576052 RIMBP3BA6NNM3 1639 aa34.63■■■■□ 3.13
P4HB-221ENST00000576052 RIMBP3Q9UFD9 1639 aa34.63■■■■□ 3.13
P4HB-221ENST00000576052 CHD1O14646 1710 aa34.58■■■■□ 3.13
P4HB-221ENST00000576052 RAD54L2Q9Y4B4 1467 aa34.54■■■■□ 3.12
P4HB-221ENST00000576052 ARHGEF11O15085 1522 aa34.5■■■■□ 3.11
P4HB-221ENST00000576052 SOGA1O94964 1423 aa34.49■■■■□ 3.11
P4HB-221ENST00000576052 FGD5Q6ZNL6 1462 aa34.48■■■■□ 3.11
P4HB-221ENST00000576052 CUX1P39880 1505 aa34.48■■■■□ 3.11
P4HB-221ENST00000576052 WDR97A6NE52 1622 aa34.46■■■■□ 3.11
P4HB-221ENST00000576052 TDRD9Q8NDG6 1382 aaKnown RBP34.39■■■■□ 3.1
P4HB-221ENST00000576052 SNAPC4Q5SXM2 1469 aa34.29■■■■□ 3.08
P4HB-221ENST00000576052 FBLN2P98095 1184 aa34.28■■■■□ 3.08
P4HB-221ENST00000576052 SUPT5HO00267 1087 aaKnown RBP34.26■■■■□ 3.08
P4HB-221ENST00000576052 MAGI1Q96QZ7 1491 aaPredicted RBP34.23■■■■□ 3.07
P4HB-221ENST00000576052 GRIN2BQ13224 1484 aa34.21■■■■□ 3.07
P4HB-221ENST00000576052 PBRM1Q86U86 1689 aa34.18■■■■□ 3.06
P4HB-221ENST00000576052 CLASP1Q7Z460 1538 aa34.17■■■■□ 3.06
P4HB-221ENST00000576052 ARAP1Q96P48 1450 aa34.16■■■■□ 3.06
P4HB-221ENST00000576052 CYB5RLQ6IPT4 315 aa34.13■■■■□ 3.05
P4HB-221ENST00000576052 ABCA10Q8WWZ4 1543 aa34.12■■■■□ 3.05
P4HB-221ENST00000576052 SYNJ1O43426 1573 aa34.11■■■■□ 3.05
P4HB-221ENST00000576052 SYNJ2O15056 1496 aa34.1■■■■□ 3.05
P4HB-221ENST00000576052 GAPVD1Q14C86 1478 aa34.1■■■■□ 3.05
P4HB-221ENST00000576052 ABCA5Q8WWZ7 1642 aa34.1■■■■□ 3.05
P4HB-221ENST00000576052 CHMP7Q8WUX9 453 aaPredicted RBP34.08■■■■□ 3.05
P4HB-221ENST00000576052 BIVM-ERCC5R4GMW8 1640 aa34.01■■■■□ 3.04
P4HB-221ENST00000576052 TOP2BQ02880 1626 aa33.97■■■■□ 3.03
P4HB-221ENST00000576052 WRNQ14191 1432 aaPredicted RBP eCLIP33.93■■■■□ 3.02
P4HB-221ENST00000576052 ADAMTS12P58397 1594 aa33.81■■■■□ 3
P4HB-221ENST00000576052 GRIN2AQ12879 1464 aa33.78■■■■□ 3
P4HB-221ENST00000576052 NUP160Q12769 1436 aa33.7■■■□□ 2.98
P4HB-221ENST00000576052 ERICH3Q5RHP9 1530 aa33.69■■■□□ 2.98
P4HB-221ENST00000576052 CEP170Q5SW79 1584 aa33.69■■■□□ 2.98
P4HB-221ENST00000576052 TRHP20396 242 aaPredicted RBP33.68■■■□□ 2.98
P4HB-221ENST00000576052 FHAD1B1AJZ9 1412 aa33.67■■■□□ 2.98
P4HB-221ENST00000576052 ERCC6L2Q5T890 1561 aa33.61■■■□□ 2.97
P4HB-221ENST00000576052 SHROOM2Q13796 1616 aa33.6■■■□□ 2.97
P4HB-221ENST00000576052 RUSC2Q8N2Y8 1516 aa33.34■■■□□ 2.93
P4HB-221ENST00000576052 PRG4Q92954 1404 aaPredicted RBP33.3■■■□□ 2.92
P4HB-221ENST00000576052 JPH4Q96JJ6 628 aa33.27■■■□□ 2.92
P4HB-221ENST00000576052 CUL7Q14999 1698 aa33.24■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 299.6 ms