RNA–Protein interactions for RNA: ENST00000588002.5

YIF1B-209, Transcript of Yip1 interacting factor homolog B, membrane trafficking protein, humanhuman

TSL 5

Gene YIF1B, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1B-209ENST00000588002 NISCHQ9Y2I1 1504 aa36.44■■■■□ 3.42
YIF1B-209ENST00000588002 CCDC180Q9P1Z9 1646 aa32.56■■■□□ 2.8
YIF1B-209ENST00000588002 ABCC9O60706 1549 aa32.46■■■□□ 2.79
YIF1B-209ENST00000588002 RB1CC1Q8TDY2 1594 aa30.87■■■□□ 2.53
YIF1B-209ENST00000588002 NACADO15069 1562 aa30.75■■■□□ 2.51
YIF1B-209ENST00000588002 DNAJC5BQ9UF47 199 aa30.65■■■□□ 2.5
YIF1B-209ENST00000588002 MYO15BQ96JP2 1530 aa30.5■■■□□ 2.47
YIF1B-209ENST00000588002 DCAF8L2P0C7V8 631 aa30.47■■■□□ 2.47
YIF1B-209ENST00000588002 ZCCHC6Q5VYS8 1495 aaKnown RBP30.26■■■□□ 2.44
YIF1B-209ENST00000588002 UNC13AQ9UPW8 1703 aa30.22■■■□□ 2.43
YIF1B-209ENST00000588002 DCAF1Q9Y4B6 1507 aa30.17■■■□□ 2.42
YIF1B-209ENST00000588002 PABPN1Q86U42 306 aaKnown RBP eCLIP30.11■■■□□ 2.41
YIF1B-209ENST00000588002 BICRAQ9NZM4 1560 aa30■■■□□ 2.39
YIF1B-209ENST00000588002 SHROOM4Q9ULL8 1493 aa29.69■■■□□ 2.34
YIF1B-209ENST00000588002 SCRIBQ14160 1630 aa29.61■■■□□ 2.33
YIF1B-209ENST00000588002 CC2D2AQ9P2K1 1620 aa29.34■■■□□ 2.29
YIF1B-209ENST00000588002 CECR2Q9BXF3 1484 aa29.26■■■□□ 2.27
YIF1B-209ENST00000588002 EIF4G1Q04637 1599 aaKnown RBP29.22■■■□□ 2.27
YIF1B-209ENST00000588002 NCAPD3P42695 1498 aa28.43■■■□□ 2.14
YIF1B-209ENST00000588002 DNAJC5Q9H3Z4 198 aa28.37■■■□□ 2.13
YIF1B-209ENST00000588002 ATAD2BQ9ULI0 1458 aa28.34■■■□□ 2.13
YIF1B-209ENST00000588002 SMARCA4P51532 1647 aa28.33■■■□□ 2.13
YIF1B-209ENST00000588002 SMARCA2P51531 1590 aa28.25■■■□□ 2.11
YIF1B-209ENST00000588002 BAZ1AQ9NRL2 1556 aaPredicted RBP28.24■■■□□ 2.11
YIF1B-209ENST00000588002 HMGXB3Q12766 1538 aa28.22■■■□□ 2.11
YIF1B-209ENST00000588002 PEG3Q9GZU2 1588 aa28.13■■■□□ 2.09
YIF1B-209ENST00000588002 CUX2O14529 1486 aa28.08■■■□□ 2.09
YIF1B-209ENST00000588002 ERCC6Q03468 1493 aa28.07■■■□□ 2.08
YIF1B-209ENST00000588002 MROH2BQ7Z745 1585 aa28.06■■■□□ 2.08
YIF1B-209ENST00000588002 BAZ1BQ9UIG0 1483 aaKnown RBP28.03■■■□□ 2.08
YIF1B-209ENST00000588002 NESP48681 1621 aa27.81■■■□□ 2.04
YIF1B-209ENST00000588002 LAMC3Q9Y6N6 1575 aa27.69■■■□□ 2.02
YIF1B-209ENST00000588002 WIZO95785 1651 aa27.67■■■□□ 2.02
YIF1B-209ENST00000588002 THOC2Q8NI27 1593 aaKnown RBP27.65■■■□□ 2.02
YIF1B-209ENST00000588002 RSF1Q96T23 1441 aaPredicted RBP27.59■■■□□ 2.01
YIF1B-209ENST00000588002 CADPSQ9ULU8 1353 aa27.55■■■□□ 2
YIF1B-209ENST00000588002 KIF21AQ7Z4S6 1674 aa27.54■■■□□ 2
YIF1B-209ENST00000588002 PDS5BQ9NTI5 1447 aa27.52■■■□□ 2
YIF1B-209ENST00000588002 TOP2AP11388 1531 aaKnown RBP27.4■■□□□ 1.98
YIF1B-209ENST00000588002 CFTRP13569 1480 aa27.31■■□□□ 1.96
YIF1B-209ENST00000588002 MRC2Q9UBG0 1479 aa27.26■■□□□ 1.95
YIF1B-209ENST00000588002 WDR62O43379 1518 aa27.21■■□□□ 1.95
YIF1B-209ENST00000588002 FANCD2Q9BXW9 1451 aa27.19■■□□□ 1.94
YIF1B-209ENST00000588002 CEP164Q9UPV0 1460 aa27.19■■□□□ 1.94
YIF1B-209ENST00000588002 CCDC88BA6NC98 1476 aa27.09■■□□□ 1.93
YIF1B-209ENST00000588002 TRIM41Q8WV44 630 aa27.07■■□□□ 1.92
YIF1B-209ENST00000588002 URB2Q14146 1524 aaKnown RBP26.97■■□□□ 1.91
YIF1B-209ENST00000588002 PRDM2Q13029 1718 aa26.92■■□□□ 1.9
YIF1B-209ENST00000588002 OSCARQ8IYS5 282 aa26.75■■□□□ 1.87
YIF1B-209ENST00000588002 TOPBP1Q92547 1522 aa26.71■■□□□ 1.87
YIF1B-209ENST00000588002 ABCC8Q09428 1581 aa26.69■■□□□ 1.86
YIF1B-209ENST00000588002 IFT140Q96RY7 1462 aa26.67■■□□□ 1.86
YIF1B-209ENST00000588002 DNMBPQ6XZF7 1577 aa26.63■■□□□ 1.85
YIF1B-209ENST00000588002 ZNF608Q9ULD9 1512 aaPredicted RBP26.59■■□□□ 1.85
YIF1B-209ENST00000588002 RIMBP3CA6NJZ7 1639 aa26.51■■□□□ 1.83
YIF1B-209ENST00000588002 RIMBP3BA6NNM3 1639 aa26.51■■□□□ 1.83
YIF1B-209ENST00000588002 RIMBP3Q9UFD9 1639 aa26.51■■□□□ 1.83
YIF1B-209ENST00000588002 TARBP1Q13395 1621 aaKnown RBP26.47■■□□□ 1.83
YIF1B-209ENST00000588002 POLA1P09884 1462 aaPredicted RBP26.47■■□□□ 1.83
YIF1B-209ENST00000588002 EIF4G3O43432 1585 aaKnown RBP26.42■■□□□ 1.82
YIF1B-209ENST00000588002 SUPT5HO00267 1087 aaKnown RBP26.41■■□□□ 1.82
YIF1B-209ENST00000588002 AQRO60306 1485 aaKnown RBP eCLIP26.36■■□□□ 1.815e-7■■■□□ 16.9
YIF1B-209ENST00000588002 ARHGEF11O15085 1522 aa26.35■■□□□ 1.81
YIF1B-209ENST00000588002 CUX1P39880 1505 aa26.35■■□□□ 1.81
YIF1B-209ENST00000588002 SOGA1O94964 1423 aa26.33■■□□□ 1.81
YIF1B-209ENST00000588002 RAD54L2Q9Y4B4 1467 aa26.33■■□□□ 1.81
YIF1B-209ENST00000588002 FGD5Q6ZNL6 1462 aa26.31■■□□□ 1.8
YIF1B-209ENST00000588002 CHD1O14646 1710 aa26.29■■□□□ 1.8
YIF1B-209ENST00000588002 WDR97A6NE52 1622 aa26.25■■□□□ 1.79
YIF1B-209ENST00000588002 TDRD9Q8NDG6 1382 aaKnown RBP26.23■■□□□ 1.79
YIF1B-209ENST00000588002 CYB5RLQ6IPT4 315 aa26.13■■□□□ 1.77
YIF1B-209ENST00000588002 FBLN2P98095 1184 aa26.1■■□□□ 1.77
YIF1B-209ENST00000588002 GRIN2BQ13224 1484 aa26.1■■□□□ 1.77
YIF1B-209ENST00000588002 SNAPC4Q5SXM2 1469 aa26.1■■□□□ 1.77
YIF1B-209ENST00000588002 MAGI1Q96QZ7 1491 aaPredicted RBP26.08■■□□□ 1.77
YIF1B-209ENST00000588002 ABCA10Q8WWZ4 1543 aa26.08■■□□□ 1.77
YIF1B-209ENST00000588002 ARAP1Q96P48 1450 aa26.07■■□□□ 1.76
YIF1B-209ENST00000588002 GAPVD1Q14C86 1478 aa26.02■■□□□ 1.76
YIF1B-209ENST00000588002 TRHP20396 242 aaPredicted RBP26■■□□□ 1.75
YIF1B-209ENST00000588002 WRNQ14191 1432 aaPredicted RBP eCLIP25.99■■□□□ 1.75
YIF1B-209ENST00000588002 TOP2BQ02880 1626 aa25.99■■□□□ 1.75
YIF1B-209ENST00000588002 ABCA5Q8WWZ7 1642 aa25.99■■□□□ 1.75
YIF1B-209ENST00000588002 SYNJ2O15056 1496 aa25.98■■□□□ 1.75
YIF1B-209ENST00000588002 BIVM-ERCC5R4GMW8 1640 aa25.97■■□□□ 1.75
YIF1B-209ENST00000588002 CHMP7Q8WUX9 453 aaPredicted RBP25.96■■□□□ 1.75
YIF1B-209ENST00000588002 SYNJ1O43426 1573 aa25.95■■□□□ 1.74
YIF1B-209ENST00000588002 CLASP1Q7Z460 1538 aa25.94■■□□□ 1.74
YIF1B-209ENST00000588002 PBRM1Q86U86 1689 aa25.91■■□□□ 1.74
YIF1B-209ENST00000588002 ADAMTS12P58397 1594 aa25.76■■□□□ 1.71
YIF1B-209ENST00000588002 GRIN2AQ12879 1464 aa25.75■■□□□ 1.71
YIF1B-209ENST00000588002 ERICH3Q5RHP9 1530 aa25.74■■□□□ 1.71
YIF1B-209ENST00000588002 FHAD1B1AJZ9 1412 aa25.72■■□□□ 1.71
YIF1B-209ENST00000588002 NUP160Q12769 1436 aa25.71■■□□□ 1.71
YIF1B-209ENST00000588002 CEP170Q5SW79 1584 aa25.63■■□□□ 1.69
YIF1B-209ENST00000588002 SHROOM2Q13796 1616 aa25.53■■□□□ 1.68
YIF1B-209ENST00000588002 AEBP2Q6ZN18 517 aaPredicted RBP25.52■■□□□ 1.68
YIF1B-209ENST00000588002 ERCC6L2Q5T890 1561 aa25.51■■□□□ 1.67
YIF1B-209ENST00000588002 KIF27Q86VH2 1401 aa25.48■■□□□ 1.67
YIF1B-209ENST00000588002 IGF1RP08069 1367 aa25.48■■□□□ 1.67
YIF1B-209ENST00000588002 RUSC2Q8N2Y8 1516 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms