RNA–Protein interactions for RNA: ENST00000526658.1

SLC39A4-203, Transcript of solute carrier family 39 member 4, humanhuman

TSL 3

Gene SLC39A4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A4-203ENST00000526658 NISCHQ9Y2I1 1504 aa44.99■■■■■ 4.79
SLC39A4-203ENST00000526658 CCDC180Q9P1Z9 1646 aa40.38■■■■■ 4.06
SLC39A4-203ENST00000526658 ABCC9O60706 1549 aa40.08■■■■■ 4.01
SLC39A4-203ENST00000526658 RB1CC1Q8TDY2 1594 aa38.31■■■■□ 3.72
SLC39A4-203ENST00000526658 NACADO15069 1562 aa38.08■■■■□ 3.69
SLC39A4-203ENST00000526658 DCAF8L2P0C7V8 631 aa37.83■■■■□ 3.65
SLC39A4-203ENST00000526658 MYO15BQ96JP2 1530 aa37.61■■■■□ 3.61
SLC39A4-203ENST00000526658 UNC13AQ9UPW8 1703 aa37.46■■■■□ 3.59
SLC39A4-203ENST00000526658 ZCCHC6Q5VYS8 1495 aaKnown RBP37.35■■■■□ 3.57
SLC39A4-203ENST00000526658 DNAJC5BQ9UF47 199 aa37.33■■■■□ 3.57
SLC39A4-203ENST00000526658 PABPN1Q86U42 306 aaKnown RBP eCLIP37.28■■■■□ 3.56
SLC39A4-203ENST00000526658 DCAF1Q9Y4B6 1507 aa37.2■■■■□ 3.55
SLC39A4-203ENST00000526658 BICRAQ9NZM4 1560 aa37.12■■■■□ 3.53
SLC39A4-203ENST00000526658 SCRIBQ14160 1630 aa36.76■■■■□ 3.48
SLC39A4-203ENST00000526658 SHROOM4Q9ULL8 1493 aa36.72■■■■□ 3.47
SLC39A4-203ENST00000526658 CC2D2AQ9P2K1 1620 aa36.26■■■■□ 3.39
SLC39A4-203ENST00000526658 EIF4G1Q04637 1599 aaKnown RBP36.23■■■■□ 3.39
SLC39A4-203ENST00000526658 CECR2Q9BXF3 1484 aa36.1■■■■□ 3.37
SLC39A4-203ENST00000526658 NCAPD3P42695 1498 aa35.09■■■■□ 3.21
SLC39A4-203ENST00000526658 SMARCA4P51532 1647 aa35.09■■■■□ 3.21
SLC39A4-203ENST00000526658 ATAD2BQ9ULI0 1458 aa35.02■■■■□ 3.2
SLC39A4-203ENST00000526658 SMARCA2P51531 1590 aa35■■■■□ 3.19
SLC39A4-203ENST00000526658 BAZ1AQ9NRL2 1556 aaPredicted RBP34.95■■■■□ 3.18
SLC39A4-203ENST00000526658 HMGXB3Q12766 1538 aa34.92■■■■□ 3.18
SLC39A4-203ENST00000526658 PEG3Q9GZU2 1588 aa34.74■■■■□ 3.15
SLC39A4-203ENST00000526658 BAZ1BQ9UIG0 1483 aaKnown RBP34.73■■■■□ 3.15
SLC39A4-203ENST00000526658 MROH2BQ7Z745 1585 aa34.65■■■■□ 3.14
SLC39A4-203ENST00000526658 ERCC6Q03468 1493 aa34.65■■■■□ 3.14
SLC39A4-203ENST00000526658 DNAJC5Q9H3Z4 198 aa34.58■■■■□ 3.13
SLC39A4-203ENST00000526658 CUX2O14529 1486 aa34.51■■■■□ 3.11
SLC39A4-203ENST00000526658 NESP48681 1621 aa34.47■■■■□ 3.11
SLC39A4-203ENST00000526658 LAMC3Q9Y6N6 1575 aa34.35■■■■□ 3.09
SLC39A4-203ENST00000526658 WIZO95785 1651 aa34.28■■■■□ 3.08
SLC39A4-203ENST00000526658 THOC2Q8NI27 1593 aaKnown RBP34.16■■■■□ 3.06
SLC39A4-203ENST00000526658 KIF21AQ7Z4S6 1674 aa34.12■■■■□ 3.05
SLC39A4-203ENST00000526658 PDS5BQ9NTI5 1447 aa34.1■■■■□ 3.05
SLC39A4-203ENST00000526658 CADPSQ9ULU8 1353 aa34.03■■■■□ 3.04
SLC39A4-203ENST00000526658 RSF1Q96T23 1441 aaPredicted RBP33.97■■■■□ 3.03
SLC39A4-203ENST00000526658 TOP2AP11388 1531 aaKnown RBP33.89■■■■□ 3.02
SLC39A4-203ENST00000526658 MRC2Q9UBG0 1479 aa33.81■■■■□ 3
SLC39A4-203ENST00000526658 SUPT5HO00267 1087 aaKnown RBP33.76■■■□□ 2.99
SLC39A4-203ENST00000526658 CEP164Q9UPV0 1460 aa33.73■■■□□ 2.99
SLC39A4-203ENST00000526658 WDR62O43379 1518 aa33.73■■■□□ 2.99
SLC39A4-203ENST00000526658 CFTRP13569 1480 aa33.69■■■□□ 2.98
SLC39A4-203ENST00000526658 FANCD2Q9BXW9 1451 aa33.68■■■□□ 2.98
SLC39A4-203ENST00000526658 PRDM2Q13029 1718 aa33.53■■■□□ 2.96
SLC39A4-203ENST00000526658 CCDC88BA6NC98 1476 aa33.44■■■□□ 2.94
SLC39A4-203ENST00000526658 URB2Q14146 1524 aaKnown RBP33.37■■■□□ 2.93
SLC39A4-203ENST00000526658 TOPBP1Q92547 1522 aa33.07■■■□□ 2.88
SLC39A4-203ENST00000526658 ABCC8Q09428 1581 aa33.04■■■□□ 2.88
SLC39A4-203ENST00000526658 IFT140Q96RY7 1462 aa33.03■■■□□ 2.88
SLC39A4-203ENST00000526658 DNMBPQ6XZF7 1577 aa33■■■□□ 2.87
SLC39A4-203ENST00000526658 ZNF608Q9ULD9 1512 aaPredicted RBP32.91■■■□□ 2.86
SLC39A4-203ENST00000526658 OSCARQ8IYS5 282 aa32.89■■■□□ 2.86
SLC39A4-203ENST00000526658 TRIM41Q8WV44 630 aa32.88■■■□□ 2.85
SLC39A4-203ENST00000526658 EIF4G3O43432 1585 aaKnown RBP32.83■■■□□ 2.85
SLC39A4-203ENST00000526658 TARBP1Q13395 1621 aaKnown RBP32.77■■■□□ 2.84
SLC39A4-203ENST00000526658 POLA1P09884 1462 aaPredicted RBP32.74■■■□□ 2.83
SLC39A4-203ENST00000526658 AQRO60306 1485 aaKnown RBP eCLIP32.62■■■□□ 2.811e-6■■□□□ 14.5
SLC39A4-203ENST00000526658 RAD54L2Q9Y4B4 1467 aa32.58■■■□□ 2.81
SLC39A4-203ENST00000526658 FGD5Q6ZNL6 1462 aa32.57■■■□□ 2.8
SLC39A4-203ENST00000526658 SOGA1O94964 1423 aa32.57■■■□□ 2.8
SLC39A4-203ENST00000526658 CHD1O14646 1710 aa32.56■■■□□ 2.8
SLC39A4-203ENST00000526658 CUX1P39880 1505 aa32.56■■■□□ 2.8
SLC39A4-203ENST00000526658 WDR97A6NE52 1622 aa32.52■■■□□ 2.8
SLC39A4-203ENST00000526658 RIMBP3CA6NJZ7 1639 aa32.52■■■□□ 2.8
SLC39A4-203ENST00000526658 RIMBP3BA6NNM3 1639 aa32.52■■■□□ 2.8
SLC39A4-203ENST00000526658 RIMBP3Q9UFD9 1639 aa32.52■■■□□ 2.8
SLC39A4-203ENST00000526658 CHIC1Q5VXU3 224 aa32.52■■■□□ 2.8
SLC39A4-203ENST00000526658 TDRD9Q8NDG6 1382 aaKnown RBP32.45■■■□□ 2.78
SLC39A4-203ENST00000526658 ARHGEF11O15085 1522 aa32.41■■■□□ 2.78
SLC39A4-203ENST00000526658 FBLN2P98095 1184 aa32.38■■■□□ 2.77
SLC39A4-203ENST00000526658 SNAPC4Q5SXM2 1469 aa32.35■■■□□ 2.77
SLC39A4-203ENST00000526658 MAGI1Q96QZ7 1491 aaPredicted RBP32.3■■■□□ 2.76
SLC39A4-203ENST00000526658 GRIN2BQ13224 1484 aa32.29■■■□□ 2.76
SLC39A4-203ENST00000526658 PBRM1Q86U86 1689 aa32.26■■■□□ 2.75
SLC39A4-203ENST00000526658 ABCA10Q8WWZ4 1543 aa32.21■■■□□ 2.75
SLC39A4-203ENST00000526658 GAPVD1Q14C86 1478 aa32.2■■■□□ 2.75
SLC39A4-203ENST00000526658 CHMP7Q8WUX9 453 aaPredicted RBP32.19■■■□□ 2.74
SLC39A4-203ENST00000526658 SYNJ1O43426 1573 aa32.19■■■□□ 2.74
SLC39A4-203ENST00000526658 ABCA5Q8WWZ7 1642 aa32.18■■■□□ 2.74
SLC39A4-203ENST00000526658 SYNJ2O15056 1496 aa32.17■■■□□ 2.74
SLC39A4-203ENST00000526658 BIVM-ERCC5R4GMW8 1640 aa32.15■■■□□ 2.74
SLC39A4-203ENST00000526658 CLASP1Q7Z460 1538 aa32.15■■■□□ 2.74
SLC39A4-203ENST00000526658 TOP2BQ02880 1626 aa32.13■■■□□ 2.73
SLC39A4-203ENST00000526658 WRNQ14191 1432 aaPredicted RBP eCLIP32.1■■■□□ 2.73
SLC39A4-203ENST00000526658 CYB5RLQ6IPT4 315 aa32.1■■■□□ 2.73
SLC39A4-203ENST00000526658 ARAP1Q96P48 1450 aa32.1■■■□□ 2.73
SLC39A4-203ENST00000526658 ADAMTS12P58397 1594 aa31.93■■■□□ 2.7
SLC39A4-203ENST00000526658 GRIN2AQ12879 1464 aa31.89■■■□□ 2.7
SLC39A4-203ENST00000526658 ERICH3Q5RHP9 1530 aa31.84■■■□□ 2.69
SLC39A4-203ENST00000526658 FHAD1B1AJZ9 1412 aa31.81■■■□□ 2.68
SLC39A4-203ENST00000526658 CEP170Q5SW79 1584 aa31.77■■■□□ 2.68
SLC39A4-203ENST00000526658 NUP160Q12769 1436 aa31.75■■■□□ 2.67
SLC39A4-203ENST00000526658 TRHP20396 242 aaPredicted RBP31.71■■■□□ 2.67
SLC39A4-203ENST00000526658 SHROOM2Q13796 1616 aa31.63■■■□□ 2.65
SLC39A4-203ENST00000526658 ERCC6L2Q5T890 1561 aa31.62■■■□□ 2.65
SLC39A4-203ENST00000526658 RUSC2Q8N2Y8 1516 aa31.49■■■□□ 2.63
SLC39A4-203ENST00000526658 KIF27Q86VH2 1401 aa31.49■■■□□ 2.63
SLC39A4-203ENST00000526658 CUL7Q14999 1698 aa31.47■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms