RNA–Protein interactions for RNA: ENST00000472229.1

MRPS18B-207, Transcript of mitochondrial ribosomal protein S18B, humanhuman

TSL 3

Gene MRPS18B, Length 1,409 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS18B-207ENST00000472229 NISCHQ9Y2I1 1504 aa22.76■■□□□ 1.23
MRPS18B-207ENST00000472229 ABCC9O60706 1549 aa20.55■□□□□ 0.88
MRPS18B-207ENST00000472229 CCDC180Q9P1Z9 1646 aa20.46■□□□□ 0.87
MRPS18B-207ENST00000472229 RB1CC1Q8TDY2 1594 aa19.53■□□□□ 0.72
MRPS18B-207ENST00000472229 DNAJC5BQ9UF47 199 aa19.4■□□□□ 0.7
MRPS18B-207ENST00000472229 NACADO15069 1562 aa19.38■□□□□ 0.69
MRPS18B-207ENST00000472229 DCAF8L2P0C7V8 631 aa19.23■□□□□ 0.67
MRPS18B-207ENST00000472229 PABPN1Q86U42 306 aaKnown RBP eCLIP19.12■□□□□ 0.65
MRPS18B-207ENST00000472229 MYO15BQ96JP2 1530 aa19.11■□□□□ 0.65
MRPS18B-207ENST00000472229 UNC13AQ9UPW8 1703 aa19.07■□□□□ 0.64
MRPS18B-207ENST00000472229 BICRAQ9NZM4 1560 aa18.97■□□□□ 0.63
MRPS18B-207ENST00000472229 ZCCHC6Q5VYS8 1495 aaKnown RBP18.84■□□□□ 0.61
MRPS18B-207ENST00000472229 DCAF1Q9Y4B6 1507 aa18.81■□□□□ 0.6
MRPS18B-207ENST00000472229 SHROOM4Q9ULL8 1493 aa18.72■□□□□ 0.59
MRPS18B-207ENST00000472229 SCRIBQ14160 1630 aa18.62■□□□□ 0.57
MRPS18B-207ENST00000472229 CC2D2AQ9P2K1 1620 aa18.57■□□□□ 0.56
MRPS18B-207ENST00000472229 CECR2Q9BXF3 1484 aa18.54■□□□□ 0.56
MRPS18B-207ENST00000472229 EIF4G1Q04637 1599 aaKnown RBP18.51■□□□□ 0.55
MRPS18B-207ENST00000472229 NCAPD3P42695 1498 aa17.9■□□□□ 0.46
MRPS18B-207ENST00000472229 DNAJC5Q9H3Z4 198 aa17.89■□□□□ 0.46
MRPS18B-207ENST00000472229 ATAD2BQ9ULI0 1458 aa17.82■□□□□ 0.44
MRPS18B-207ENST00000472229 CUX2O14529 1486 aa17.77■□□□□ 0.44
MRPS18B-207ENST00000472229 SMARCA4P51532 1647 aa17.77■□□□□ 0.43
MRPS18B-207ENST00000472229 SMARCA2P51531 1590 aa17.76■□□□□ 0.43
MRPS18B-207ENST00000472229 HMGXB3Q12766 1538 aa17.75■□□□□ 0.43
MRPS18B-207ENST00000472229 ERCC6Q03468 1493 aa17.75■□□□□ 0.43
MRPS18B-207ENST00000472229 BAZ1AQ9NRL2 1556 aaPredicted RBP17.67■□□□□ 0.42
MRPS18B-207ENST00000472229 BAZ1BQ9UIG0 1483 aaKnown RBP17.63■□□□□ 0.41
MRPS18B-207ENST00000472229 NESP48681 1621 aa17.63■□□□□ 0.41
MRPS18B-207ENST00000472229 PEG3Q9GZU2 1588 aa17.62■□□□□ 0.41
MRPS18B-207ENST00000472229 MROH2BQ7Z745 1585 aa17.53■□□□□ 0.4
MRPS18B-207ENST00000472229 LAMC3Q9Y6N6 1575 aa17.5■□□□□ 0.39
MRPS18B-207ENST00000472229 THOC2Q8NI27 1593 aaKnown RBP17.48■□□□□ 0.39
MRPS18B-207ENST00000472229 PDS5BQ9NTI5 1447 aa17.4■□□□□ 0.38
MRPS18B-207ENST00000472229 KIF21AQ7Z4S6 1674 aa17.39■□□□□ 0.37
MRPS18B-207ENST00000472229 CADPSQ9ULU8 1353 aa17.35■□□□□ 0.37
MRPS18B-207ENST00000472229 WIZO95785 1651 aa17.3■□□□□ 0.36
MRPS18B-207ENST00000472229 MRC2Q9UBG0 1479 aa17.25■□□□□ 0.35
MRPS18B-207ENST00000472229 WDR62O43379 1518 aa17.23■□□□□ 0.35
MRPS18B-207ENST00000472229 CEP164Q9UPV0 1460 aa17.16■□□□□ 0.34
MRPS18B-207ENST00000472229 RSF1Q96T23 1441 aaPredicted RBP17.14■□□□□ 0.33
MRPS18B-207ENST00000472229 FANCD2Q9BXW9 1451 aa17.14■□□□□ 0.33
MRPS18B-207ENST00000472229 CFTRP13569 1480 aa17.13■□□□□ 0.33
MRPS18B-207ENST00000472229 TOP2AP11388 1531 aaKnown RBP17.09■□□□□ 0.33
MRPS18B-207ENST00000472229 TRIM41Q8WV44 630 aa17.02■□□□□ 0.31
MRPS18B-207ENST00000472229 URB2Q14146 1524 aaKnown RBP17■□□□□ 0.31
MRPS18B-207ENST00000472229 OSCARQ8IYS5 282 aa16.95■□□□□ 0.3
MRPS18B-207ENST00000472229 PRDM2Q13029 1718 aa16.92■□□□□ 0.3
MRPS18B-207ENST00000472229 CCDC88BA6NC98 1476 aa16.9■□□□□ 0.3
MRPS18B-207ENST00000472229 IFT140Q96RY7 1462 aa16.83■□□□□ 0.28
MRPS18B-207ENST00000472229 ZNF608Q9ULD9 1512 aaPredicted RBP16.81■□□□□ 0.28
MRPS18B-207ENST00000472229 TOPBP1Q92547 1522 aa16.8■□□□□ 0.28
MRPS18B-207ENST00000472229 ABCC8Q09428 1581 aa16.77■□□□□ 0.27
MRPS18B-207ENST00000472229 DNMBPQ6XZF7 1577 aa16.73■□□□□ 0.27
MRPS18B-207ENST00000472229 RIMBP3CA6NJZ7 1639 aa16.72■□□□□ 0.27
MRPS18B-207ENST00000472229 RIMBP3BA6NNM3 1639 aa16.72■□□□□ 0.27
MRPS18B-207ENST00000472229 RIMBP3Q9UFD9 1639 aa16.72■□□□□ 0.27
MRPS18B-207ENST00000472229 EIF4G3O43432 1585 aaKnown RBP16.7■□□□□ 0.26
MRPS18B-207ENST00000472229 ARHGEF11O15085 1522 aa16.67■□□□□ 0.26
MRPS18B-207ENST00000472229 TARBP1Q13395 1621 aaKnown RBP16.67■□□□□ 0.26
MRPS18B-207ENST00000472229 AQRO60306 1485 aaKnown RBP eCLIP16.64■□□□□ 0.254e-8■■■■■ 38.5
MRPS18B-207ENST00000472229 POLA1P09884 1462 aaPredicted RBP16.63■□□□□ 0.25
MRPS18B-207ENST00000472229 CHD1O14646 1710 aa16.59■□□□□ 0.25
MRPS18B-207ENST00000472229 RAD54L2Q9Y4B4 1467 aa16.56■□□□□ 0.24
MRPS18B-207ENST00000472229 SOGA1O94964 1423 aa16.55■□□□□ 0.24
MRPS18B-207ENST00000472229 FBLN2P98095 1184 aa16.54■□□□□ 0.24
MRPS18B-207ENST00000472229 CYB5RLQ6IPT4 315 aa16.54■□□□□ 0.24
MRPS18B-207ENST00000472229 TDRD9Q8NDG6 1382 aaKnown RBP16.53■□□□□ 0.24
MRPS18B-207ENST00000472229 FGD5Q6ZNL6 1462 aa16.5■□□□□ 0.23
MRPS18B-207ENST00000472229 ARAP1Q96P48 1450 aa16.5■□□□□ 0.23
MRPS18B-207ENST00000472229 WDR97A6NE52 1622 aa16.49■□□□□ 0.23
MRPS18B-207ENST00000472229 CUX1P39880 1505 aa16.47■□□□□ 0.23
MRPS18B-207ENST00000472229 SNAPC4Q5SXM2 1469 aa16.46■□□□□ 0.23
MRPS18B-207ENST00000472229 MAGI1Q96QZ7 1491 aaPredicted RBP16.44■□□□□ 0.22
MRPS18B-207ENST00000472229 CLASP1Q7Z460 1538 aa16.42■□□□□ 0.22
MRPS18B-207ENST00000472229 GRIN2BQ13224 1484 aa16.42■□□□□ 0.22
MRPS18B-207ENST00000472229 CHMP7Q8WUX9 453 aaPredicted RBP16.42■□□□□ 0.22
MRPS18B-207ENST00000472229 SYNJ1O43426 1573 aa16.39■□□□□ 0.21
MRPS18B-207ENST00000472229 TRHP20396 242 aaPredicted RBP16.38■□□□□ 0.21
MRPS18B-207ENST00000472229 SYNJ2O15056 1496 aa16.38■□□□□ 0.21
MRPS18B-207ENST00000472229 GAPVD1Q14C86 1478 aa16.34■□□□□ 0.21
MRPS18B-207ENST00000472229 ABCA10Q8WWZ4 1543 aa16.32■□□□□ 0.2
MRPS18B-207ENST00000472229 PBRM1Q86U86 1689 aa16.32■□□□□ 0.2
MRPS18B-207ENST00000472229 ABCA5Q8WWZ7 1642 aa16.3■□□□□ 0.2
MRPS18B-207ENST00000472229 SUPT5HO00267 1087 aaKnown RBP16.28■□□□□ 0.2
MRPS18B-207ENST00000472229 WRNQ14191 1432 aaPredicted RBP eCLIP16.24■□□□□ 0.19
MRPS18B-207ENST00000472229 GRIN2AQ12879 1464 aa16.2■□□□□ 0.18
MRPS18B-207ENST00000472229 TOP2BQ02880 1626 aa16.18■□□□□ 0.18
MRPS18B-207ENST00000472229 BIVM-ERCC5R4GMW8 1640 aa16.18■□□□□ 0.18
MRPS18B-207ENST00000472229 ADAMTS12P58397 1594 aa16.17■□□□□ 0.18
MRPS18B-207ENST00000472229 NUP160Q12769 1436 aa16.16■□□□□ 0.18
MRPS18B-207ENST00000472229 ERCC6L2Q5T890 1561 aa16.15■□□□□ 0.18
MRPS18B-207ENST00000472229 CEP170Q5SW79 1584 aa16.14■□□□□ 0.18
MRPS18B-207ENST00000472229 FHAD1B1AJZ9 1412 aa16.14■□□□□ 0.17
MRPS18B-207ENST00000472229 ERICH3Q5RHP9 1530 aa16.11■□□□□ 0.17
MRPS18B-207ENST00000472229 SHROOM2Q13796 1616 aa16.1■□□□□ 0.17
MRPS18B-207ENST00000472229 PRG4Q92954 1404 aaPredicted RBP16.01■□□□□ 0.15
MRPS18B-207ENST00000472229 JPH4Q96JJ6 628 aa15.99■□□□□ 0.15
MRPS18B-207ENST00000472229 AEBP2Q6ZN18 517 aaPredicted RBP15.97■□□□□ 0.15
MRPS18B-207ENST00000472229 RUSC2Q8N2Y8 1516 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms