RNA–Protein interactions for RNA: ENST00000585563.5

YIF1B-205, Transcript of Yip1 interacting factor homolog B, membrane trafficking protein, humanhuman

TSL 3

Gene YIF1B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1B-205ENST00000585563 NISCHQ9Y2I1 1504 aa43.37■■■■■ 4.53
YIF1B-205ENST00000585563 CCDC180Q9P1Z9 1646 aa38.58■■■■□ 3.77
YIF1B-205ENST00000585563 ABCC9O60706 1549 aa37.87■■■■□ 3.65
YIF1B-205ENST00000585563 RB1CC1Q8TDY2 1594 aa36.42■■■■□ 3.42
YIF1B-205ENST00000585563 DCAF8L2P0C7V8 631 aa36.38■■■■□ 3.41
YIF1B-205ENST00000585563 NACADO15069 1562 aa36.36■■■■□ 3.41
YIF1B-205ENST00000585563 MYO15BQ96JP2 1530 aa36.13■■■■□ 3.38
YIF1B-205ENST00000585563 ZCCHC6Q5VYS8 1495 aaKnown RBP36.05■■■■□ 3.36
YIF1B-205ENST00000585563 DCAF1Q9Y4B6 1507 aa35.91■■■■□ 3.34
YIF1B-205ENST00000585563 UNC13AQ9UPW8 1703 aa35.49■■■■□ 3.27
YIF1B-205ENST00000585563 PABPN1Q86U42 306 aaKnown RBP eCLIP35.41■■■■□ 3.26
YIF1B-205ENST00000585563 BICRAQ9NZM4 1560 aa35.25■■■■□ 3.23
YIF1B-205ENST00000585563 SCRIBQ14160 1630 aa35.14■■■■□ 3.22
YIF1B-205ENST00000585563 SHROOM4Q9ULL8 1493 aa34.97■■■■□ 3.19
YIF1B-205ENST00000585563 DNAJC5BQ9UF47 199 aa34.92■■■■□ 3.18
YIF1B-205ENST00000585563 EIF4G1Q04637 1599 aaKnown RBP34.36■■■■□ 3.09
YIF1B-205ENST00000585563 CC2D2AQ9P2K1 1620 aa34.25■■■■□ 3.07
YIF1B-205ENST00000585563 CECR2Q9BXF3 1484 aa34.07■■■■□ 3.05
YIF1B-205ENST00000585563 SMARCA4P51532 1647 aa33.64■■■□□ 2.98
YIF1B-205ENST00000585563 BAZ1AQ9NRL2 1556 aaPredicted RBP33.63■■■□□ 2.97
YIF1B-205ENST00000585563 NCAPD3P42695 1498 aa33.58■■■□□ 2.97
YIF1B-205ENST00000585563 ATAD2BQ9ULI0 1458 aa33.53■■■□□ 2.96
YIF1B-205ENST00000585563 SMARCA2P51531 1590 aa33.51■■■□□ 2.95
YIF1B-205ENST00000585563 MROH2BQ7Z745 1585 aa33.38■■■□□ 2.93
YIF1B-205ENST00000585563 PEG3Q9GZU2 1588 aa33.34■■■□□ 2.93
YIF1B-205ENST00000585563 HMGXB3Q12766 1538 aa33.34■■■□□ 2.93
YIF1B-205ENST00000585563 BAZ1BQ9UIG0 1483 aaKnown RBP33.25■■■□□ 2.91
YIF1B-205ENST00000585563 WIZO95785 1651 aa33■■■□□ 2.87
YIF1B-205ENST00000585563 RSF1Q96T23 1441 aaPredicted RBP32.99■■■□□ 2.87
YIF1B-205ENST00000585563 NESP48681 1621 aa32.71■■■□□ 2.83
YIF1B-205ENST00000585563 ERCC6Q03468 1493 aa32.69■■■□□ 2.82
YIF1B-205ENST00000585563 LAMC3Q9Y6N6 1575 aa32.67■■■□□ 2.82
YIF1B-205ENST00000585563 TOP2AP11388 1531 aaKnown RBP32.67■■■□□ 2.82
YIF1B-205ENST00000585563 CADPSQ9ULU8 1353 aa32.6■■■□□ 2.81
YIF1B-205ENST00000585563 PDS5BQ9NTI5 1447 aa32.52■■■□□ 2.8
YIF1B-205ENST00000585563 CUX2O14529 1486 aa32.42■■■□□ 2.78
YIF1B-205ENST00000585563 CFTRP13569 1480 aa32.35■■■□□ 2.77
YIF1B-205ENST00000585563 CCDC88BA6NC98 1476 aa32.31■■■□□ 2.76
YIF1B-205ENST00000585563 KIF21AQ7Z4S6 1674 aa32.29■■■□□ 2.76
YIF1B-205ENST00000585563 THOC2Q8NI27 1593 aaKnown RBP32.22■■■□□ 2.75
YIF1B-205ENST00000585563 FANCD2Q9BXW9 1451 aa32.17■■■□□ 2.74
YIF1B-205ENST00000585563 CEP164Q9UPV0 1460 aa32.14■■■□□ 2.74
YIF1B-205ENST00000585563 MRC2Q9UBG0 1479 aa32.12■■■□□ 2.73
YIF1B-205ENST00000585563 SUPT5HO00267 1087 aaKnown RBP32.11■■■□□ 2.73
YIF1B-205ENST00000585563 PRDM2Q13029 1718 aa32.01■■■□□ 2.72
YIF1B-205ENST00000585563 WDR62O43379 1518 aa32■■■□□ 2.71
YIF1B-205ENST00000585563 URB2Q14146 1524 aaKnown RBP31.82■■■□□ 2.68
YIF1B-205ENST00000585563 ABCC8Q09428 1581 aa31.73■■■□□ 2.67
YIF1B-205ENST00000585563 DNAJC5Q9H3Z4 198 aa31.64■■■□□ 2.66
YIF1B-205ENST00000585563 TOPBP1Q92547 1522 aa31.64■■■□□ 2.66
YIF1B-205ENST00000585563 DNMBPQ6XZF7 1577 aa31.58■■■□□ 2.65
YIF1B-205ENST00000585563 IFT140Q96RY7 1462 aa31.5■■■□□ 2.63
YIF1B-205ENST00000585563 POLA1P09884 1462 aaPredicted RBP31.35■■■□□ 2.61
YIF1B-205ENST00000585563 CUX1P39880 1505 aa31.31■■■□□ 2.6
YIF1B-205ENST00000585563 ZNF608Q9ULD9 1512 aaPredicted RBP31.3■■■□□ 2.6
YIF1B-205ENST00000585563 SOGA1O94964 1423 aa31.29■■■□□ 2.6
YIF1B-205ENST00000585563 TARBP1Q13395 1621 aaKnown RBP31.27■■■□□ 2.6
YIF1B-205ENST00000585563 FGD5Q6ZNL6 1462 aa31.25■■■□□ 2.59
YIF1B-205ENST00000585563 RAD54L2Q9Y4B4 1467 aa31.21■■■□□ 2.59
YIF1B-205ENST00000585563 AQRO60306 1485 aaKnown RBP eCLIP31.16■■■□□ 2.585e-7■■■□□ 17.9
YIF1B-205ENST00000585563 OSCARQ8IYS5 282 aa31.15■■■□□ 2.58
YIF1B-205ENST00000585563 EIF4G3O43432 1585 aaKnown RBP31.14■■■□□ 2.58
YIF1B-205ENST00000585563 WRNQ14191 1432 aaPredicted RBP eCLIP31.13■■■□□ 2.57
YIF1B-205ENST00000585563 TDRD9Q8NDG6 1382 aaKnown RBP31.1■■■□□ 2.57
YIF1B-205ENST00000585563 WDR97A6NE52 1622 aa31.08■■■□□ 2.57
YIF1B-205ENST00000585563 TOP2BQ02880 1626 aa31.04■■■□□ 2.56
YIF1B-205ENST00000585563 BIVM-ERCC5R4GMW8 1640 aa31.01■■■□□ 2.55
YIF1B-205ENST00000585563 ABCA10Q8WWZ4 1543 aa30.98■■■□□ 2.55
YIF1B-205ENST00000585563 SYNJ1O43426 1573 aa30.96■■■□□ 2.55
YIF1B-205ENST00000585563 GRIN2BQ13224 1484 aa30.91■■■□□ 2.54
YIF1B-205ENST00000585563 GAPVD1Q14C86 1478 aa30.89■■■□□ 2.54
YIF1B-205ENST00000585563 FBLN2P98095 1184 aa30.88■■■□□ 2.53
YIF1B-205ENST00000585563 MAGI1Q96QZ7 1491 aaPredicted RBP30.84■■■□□ 2.53
YIF1B-205ENST00000585563 SNAPC4Q5SXM2 1469 aa30.82■■■□□ 2.53
YIF1B-205ENST00000585563 CHMP7Q8WUX9 453 aaPredicted RBP30.8■■■□□ 2.52
YIF1B-205ENST00000585563 ABCA5Q8WWZ7 1642 aa30.8■■■□□ 2.52
YIF1B-205ENST00000585563 CHD1O14646 1710 aa30.78■■■□□ 2.52
YIF1B-205ENST00000585563 PBRM1Q86U86 1689 aa30.74■■■□□ 2.51
YIF1B-205ENST00000585563 SYNJ2O15056 1496 aa30.72■■■□□ 2.51
YIF1B-205ENST00000585563 ERICH3Q5RHP9 1530 aa30.61■■■□□ 2.49
YIF1B-205ENST00000585563 FHAD1B1AJZ9 1412 aa30.55■■■□□ 2.48
YIF1B-205ENST00000585563 KIF27Q86VH2 1401 aa30.52■■■□□ 2.48
YIF1B-205ENST00000585563 ADAMTS12P58397 1594 aa30.5■■■□□ 2.47
YIF1B-205ENST00000585563 ARHGEF11O15085 1522 aa30.5■■■□□ 2.47
YIF1B-205ENST00000585563 RIMBP3CA6NJZ7 1639 aa30.49■■■□□ 2.47
YIF1B-205ENST00000585563 RIMBP3BA6NNM3 1639 aa30.49■■■□□ 2.47
YIF1B-205ENST00000585563 RIMBP3Q9UFD9 1639 aa30.49■■■□□ 2.47
YIF1B-205ENST00000585563 TRIM41Q8WV44 630 aa30.48■■■□□ 2.47
YIF1B-205ENST00000585563 GRIN2AQ12879 1464 aa30.48■■■□□ 2.47
YIF1B-205ENST00000585563 CLASP1Q7Z460 1538 aa30.47■■■□□ 2.47
YIF1B-205ENST00000585563 IGF1RP08069 1367 aa30.42■■■□□ 2.46
YIF1B-205ENST00000585563 NUP160Q12769 1436 aa30.37■■■□□ 2.45
YIF1B-205ENST00000585563 CYB5RLQ6IPT4 315 aa30.32■■■□□ 2.44
YIF1B-205ENST00000585563 CEP170Q5SW79 1584 aa30.28■■■□□ 2.44
YIF1B-205ENST00000585563 CUL7Q14999 1698 aa30.27■■■□□ 2.44
YIF1B-205ENST00000585563 CARMIL1Q5VZK9 1371 aa30.24■■■□□ 2.43
YIF1B-205ENST00000585563 ARAP1Q96P48 1450 aa30.23■■■□□ 2.43
YIF1B-205ENST00000585563 JPH4Q96JJ6 628 aa30.15■■■□□ 2.42
YIF1B-205ENST00000585563 RUSC2Q8N2Y8 1516 aa30.12■■■□□ 2.41
YIF1B-205ENST00000585563 SHROOM2Q13796 1616 aa30.11■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 1226.5 ms