RNA–Protein interactions for RNA: ENST00000505134.5

SEC24D-206, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 2

Gene SEC24D, Length 3,915 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-206ENST00000505134 NISCHQ9Y2I1 1504 aa10.04□□□□□ -0.8
SEC24D-206ENST00000505134 CHIC1Q5VXU3 224 aa9.32□□□□□ -0.92
SEC24D-206ENST00000505134 AEBP2Q6ZN18 517 aaPredicted RBP9.2□□□□□ -0.94
SEC24D-206ENST00000505134 CCDC180Q9P1Z9 1646 aa9.14□□□□□ -0.95
SEC24D-206ENST00000505134 DCAF1Q9Y4B6 1507 aa8.84□□□□□ -0.99
SEC24D-206ENST00000505134 MYO15BQ96JP2 1530 aa8.69□□□□□ -1.02
SEC24D-206ENST00000505134 ZCCHC6Q5VYS8 1495 aaKnown RBP8.67□□□□□ -1.02
SEC24D-206ENST00000505134 ABCC9O60706 1549 aa8.26□□□□□ -1.09
SEC24D-206ENST00000505134 PHF23Q9BUL5 403 aaPredicted RBP8.25□□□□□ -1.09
SEC24D-206ENST00000505134 EIF4G1Q04637 1599 aaKnown RBP8.21□□□□□ -1.1
SEC24D-206ENST00000505134 NACADO15069 1562 aa8.09□□□□□ -1.11
SEC24D-206ENST00000505134 PEG3Q9GZU2 1588 aa8.03□□□□□ -1.12
SEC24D-206ENST00000505134 UNC13AQ9UPW8 1703 aa8.02□□□□□ -1.13
SEC24D-206ENST00000505134 SHROOM4Q9ULL8 1493 aa8.02□□□□□ -1.13
SEC24D-206ENST00000505134 RB1CC1Q8TDY2 1594 aa7.94□□□□□ -1.14
SEC24D-206ENST00000505134 BAZ1AQ9NRL2 1556 aaPredicted RBP7.93□□□□□ -1.14
SEC24D-206ENST00000505134 HRCP23327 699 aa7.88□□□□□ -1.15
SEC24D-206ENST00000505134 EHMT2Q96KQ7 1210 aa7.87□□□□□ -1.15
SEC24D-206ENST00000505134 PLPPR3Q6T4P5 718 aa7.87□□□□□ -1.15
SEC24D-206ENST00000505134 PRDM2Q13029 1718 aa7.84□□□□□ -1.15
SEC24D-206ENST00000505134 SUPT5HO00267 1087 aaKnown RBP7.81□□□□□ -1.16
SEC24D-206ENST00000505134 SENP3Q9H4L4 574 aaPredicted RBP7.76□□□□□ -1.17
SEC24D-206ENST00000505134 TOP2AP11388 1531 aaKnown RBP7.74□□□□□ -1.17
SEC24D-206ENST00000505134 BICRAQ9NZM4 1560 aa7.74□□□□□ -1.17
SEC24D-206ENST00000505134 SMARCA2P51531 1590 aa7.73□□□□□ -1.17
SEC24D-206ENST00000505134 ZEB1P37275 1124 aaPredicted RBP7.73□□□□□ -1.17
SEC24D-206ENST00000505134 SMARCA4P51532 1647 aa7.73□□□□□ -1.17
SEC24D-206ENST00000505134 RSF1Q96T23 1441 aaPredicted RBP7.71□□□□□ -1.17
SEC24D-206ENST00000505134 PELP1Q8IZL8 1130 aaKnown RBP7.7□□□□□ -1.18
SEC24D-206ENST00000505134 BIVM-ERCC5R4GMW8 1640 aa7.66□□□□□ -1.18
SEC24D-206ENST00000505134 TRIM26Q12899 539 aaPredicted RBP7.64□□□□□ -1.19
SEC24D-206ENST00000505134 SCRIBQ14160 1630 aa7.61□□□□□ -1.19
SEC24D-206ENST00000505134 WIZO95785 1651 aa7.6□□□□□ -1.19
SEC24D-206ENST00000505134 PCGF6Q9BYE7 350 aa7.6□□□□□ -1.19
SEC24D-206ENST00000505134 MROH2BQ7Z745 1585 aa7.6□□□□□ -1.19
SEC24D-206ENST00000505134 KIF21BO75037 1637 aa7.59□□□□□ -1.19
SEC24D-206ENST00000505134 HMGXB3Q12766 1538 aa7.57□□□□□ -1.2
SEC24D-206ENST00000505134 WRNQ14191 1432 aaPredicted RBP eCLIP7.56□□□□□ -1.2
SEC24D-206ENST00000505134 ADRA2BP18089 450 aa7.52□□□□□ -1.21
SEC24D-206ENST00000505134 MYT1Q01538 1121 aa7.49□□□□□ -1.21
SEC24D-206ENST00000505134 DCAF8L2P0C7V8 631 aa7.47□□□□□ -1.21
SEC24D-206ENST00000505134 WDR97A6NE52 1622 aa7.47□□□□□ -1.21
SEC24D-206ENST00000505134 TOP2BQ02880 1626 aa7.47□□□□□ -1.21
SEC24D-206ENST00000505134 KCNA4P22459 653 aa7.46□□□□□ -1.21
SEC24D-206ENST00000505134 EEA1Q15075 1411 aa7.46□□□□□ -1.22
SEC24D-206ENST00000505134 ERICH3Q5RHP9 1530 aa7.44□□□□□ -1.22
SEC24D-206ENST00000505134 CECR2Q9BXF3 1484 aa7.43□□□□□ -1.22
SEC24D-206ENST00000505134 BAZ1BQ9UIG0 1483 aaKnown RBP7.43□□□□□ -1.22
SEC24D-206ENST00000505134 TRIM41Q8WV44 630 aa7.42□□□□□ -1.22
SEC24D-206ENST00000505134 LOC105371045A0A1W2PR82 267 aa7.4□□□□□ -1.23
SEC24D-206ENST00000505134 PPARGC1BQ86YN6 1023 aaKnown RBP7.39□□□□□ -1.23
SEC24D-206ENST00000505134 KIF21AQ7Z4S6 1674 aa7.38□□□□□ -1.23
SEC24D-206ENST00000505134 MAP3K1Q13233 1512 aa7.38□□□□□ -1.23
SEC24D-206ENST00000505134 CUX2O14529 1486 aa7.37□□□□□ -1.23
SEC24D-206ENST00000505134 SYNJ1O43426 1573 aa7.37□□□□□ -1.23
SEC24D-206ENST00000505134 CCDC88BA6NC98 1476 aa7.36□□□□□ -1.23
SEC24D-206ENST00000505134 NCAPD3P42695 1498 aa7.33□□□□□ -1.24
SEC24D-206ENST00000505134 CFAP43Q8NDM7 1665 aa7.32□□□□□ -1.24
SEC24D-206ENST00000505134 CENPBP07199 599 aaPredicted RBP7.31□□□□□ -1.24
SEC24D-206ENST00000505134 PPP6R1Q9UPN7 881 aa7.31□□□□□ -1.24
SEC24D-206ENST00000505134 ATAD2BQ9ULI0 1458 aa7.3□□□□□ -1.24
SEC24D-206ENST00000505134 TNIKQ9UKE5 1360 aa7.26□□□□□ -1.25
SEC24D-206ENST00000505134 CC2D2AQ9P2K1 1620 aa7.26□□□□□ -1.25
SEC24D-206ENST00000505134 ACIN1Q9UKV3 1341 aaKnown RBP7.24□□□□□ -1.25
SEC24D-206ENST00000505134 PRXQ9BXM0 1461 aa7.24□□□□□ -1.25
SEC24D-206ENST00000505134 CLSPNQ9HAW4 1339 aa7.24□□□□□ -1.25
SEC24D-206ENST00000505134 SLC4A1APQ9BWU0 796 aaKnown RBP7.23□□□□□ -1.25
SEC24D-206ENST00000505134 SCAF1Q9H7N4 1312 aaKnown RBP7.22□□□□□ -1.25
SEC24D-206ENST00000505134 CFTRP13569 1480 aa7.22□□□□□ -1.25
SEC24D-206ENST00000505134 THOC2Q8NI27 1593 aaKnown RBP7.22□□□□□ -1.25
SEC24D-206ENST00000505134 CTTNBP2Q8WZ74 1663 aa7.22□□□□□ -1.25
SEC24D-206ENST00000505134 CUL7Q14999 1698 aa7.21□□□□□ -1.25
SEC24D-206ENST00000505134 GOLGA3Q08378 1498 aa7.2□□□□□ -1.26
SEC24D-206ENST00000505134 CCER1Q8TC90 406 aaPredicted RBP7.2□□□□□ -1.26
SEC24D-206ENST00000505134 SLC24A1O60721 1099 aa7.2□□□□□ -1.26
SEC24D-206ENST00000505134 ABCA5Q8WWZ7 1642 aa7.2□□□□□ -1.26
SEC24D-206ENST00000505134 SAMD9Q5K651 1589 aa7.19□□□□□ -1.26
SEC24D-206ENST00000505134 CEP162Q5TB80 1403 aa7.19□□□□□ -1.26
SEC24D-206ENST00000505134 FOXD1Q16676 465 aa7.18□□□□□ -1.26
SEC24D-206ENST00000505134 LRRIQ1Q96JM4 1722 aa7.17□□□□□ -1.26
SEC24D-206ENST00000505134 DIEXFQ68CQ4 756 aaKnown RBP7.16□□□□□ -1.26
SEC24D-206ENST00000505134 CEP164Q9UPV0 1460 aa7.16□□□□□ -1.26
SEC24D-206ENST00000505134 AQRO60306 1485 aaKnown RBP eCLIP7.16□□□□□ -1.263e-6■■■■□ 19.7
SEC24D-206ENST00000505134 CUX1P39880 1505 aa7.15□□□□□ -1.26
SEC24D-206ENST00000505134 POLR1AO95602 1720 aaPredicted RBP7.15□□□□□ -1.26
SEC24D-206ENST00000505134 ABCC8Q09428 1581 aa7.15□□□□□ -1.26
SEC24D-206ENST00000505134 ARHGEF11O15085 1522 aa7.15□□□□□ -1.27
SEC24D-206ENST00000505134 FAM9AQ8IZU1 332 aaPredicted RBP7.14□□□□□ -1.27
SEC24D-206ENST00000505134 ZNF316A6NFI3 1004 aaPredicted RBP7.14□□□□□ -1.27
SEC24D-206ENST00000505134 CSRNP3Q8WYN3 585 aa7.11□□□□□ -1.27
SEC24D-206ENST00000505134 EFCAB5A4FU69 1503 aa7.11□□□□□ -1.27
SEC24D-206ENST00000505134 PIAS4Q8N2W9 510 aaPredicted RBP7.11□□□□□ -1.27
SEC24D-206ENST00000505134 LAMC3Q9Y6N6 1575 aa7.11□□□□□ -1.27
SEC24D-206ENST00000505134 DNMBPQ6XZF7 1577 aa7.1□□□□□ -1.27
SEC24D-206ENST00000505134 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.09□□□□□ -1.27
SEC24D-206ENST00000505134 RRBP1Q9P2E9 1410 aaKnown RBP7.09□□□□□ -1.27
SEC24D-206ENST00000505134 ARAP1Q96P48 1450 aa7.08□□□□□ -1.28
SEC24D-206ENST00000505134 VPS8Q8N3P4 1428 aa7.08□□□□□ -1.28
SEC24D-206ENST00000505134 NEUROD1Q13562 356 aa7.08□□□□□ -1.28
SEC24D-206ENST00000505134 TARBP1Q13395 1621 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms