RNA–Protein interactions for RNA: ENST00000472267.5

MRPS18B-208, Transcript of mitochondrial ribosomal protein S18B, humanhuman

TSL 1 (best)

Gene MRPS18B, Length 1,610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS18B-208ENST00000472267 NISCHQ9Y2I1 1504 aa24.42■■□□□ 1.5
MRPS18B-208ENST00000472267 CCDC180Q9P1Z9 1646 aa21.31■■□□□ 1
MRPS18B-208ENST00000472267 ZCCHC6Q5VYS8 1495 aaKnown RBP20.49■□□□□ 0.87
MRPS18B-208ENST00000472267 DCAF8L2P0C7V8 631 aa20.32■□□□□ 0.84
MRPS18B-208ENST00000472267 ABCC9O60706 1549 aa20.27■□□□□ 0.84
MRPS18B-208ENST00000472267 DCAF1Q9Y4B6 1507 aa20.13■□□□□ 0.81
MRPS18B-208ENST00000472267 SHROOM4Q9ULL8 1493 aa20■□□□□ 0.79
MRPS18B-208ENST00000472267 MYO15BQ96JP2 1530 aa19.9■□□□□ 0.78
MRPS18B-208ENST00000472267 NACADO15069 1562 aa19.86■□□□□ 0.77
MRPS18B-208ENST00000472267 RB1CC1Q8TDY2 1594 aa19.72■□□□□ 0.75
MRPS18B-208ENST00000472267 SCRIBQ14160 1630 aa19.66■□□□□ 0.74
MRPS18B-208ENST00000472267 UNC13AQ9UPW8 1703 aa19.35■□□□□ 0.69
MRPS18B-208ENST00000472267 SUPT5HO00267 1087 aaKnown RBP19.22■□□□□ 0.67
MRPS18B-208ENST00000472267 PABPN1Q86U42 306 aaKnown RBP eCLIP19.14■□□□□ 0.65
MRPS18B-208ENST00000472267 BICRAQ9NZM4 1560 aa19.12■□□□□ 0.65
MRPS18B-208ENST00000472267 CECR2Q9BXF3 1484 aa19.01■□□□□ 0.63
MRPS18B-208ENST00000472267 RSF1Q96T23 1441 aaPredicted RBP18.93■□□□□ 0.62
MRPS18B-208ENST00000472267 MROH2BQ7Z745 1585 aa18.89■□□□□ 0.61
MRPS18B-208ENST00000472267 BAZ1AQ9NRL2 1556 aaPredicted RBP18.86■□□□□ 0.61
MRPS18B-208ENST00000472267 SMARCA4P51532 1647 aa18.8■□□□□ 0.6
MRPS18B-208ENST00000472267 WIZO95785 1651 aa18.76■□□□□ 0.59
MRPS18B-208ENST00000472267 EIF4G1Q04637 1599 aaKnown RBP18.56■□□□□ 0.56
MRPS18B-208ENST00000472267 TOP2AP11388 1531 aaKnown RBP18.52■□□□□ 0.56
MRPS18B-208ENST00000472267 PEG3Q9GZU2 1588 aa18.52■□□□□ 0.55
MRPS18B-208ENST00000472267 ATAD2BQ9ULI0 1458 aa18.49■□□□□ 0.55
MRPS18B-208ENST00000472267 SMARCA2P51531 1590 aa18.48■□□□□ 0.55
MRPS18B-208ENST00000472267 BAZ1BQ9UIG0 1483 aaKnown RBP18.41■□□□□ 0.54
MRPS18B-208ENST00000472267 CCDC88BA6NC98 1476 aa18.35■□□□□ 0.53
MRPS18B-208ENST00000472267 CC2D2AQ9P2K1 1620 aa18.31■□□□□ 0.52
MRPS18B-208ENST00000472267 NCAPD3P42695 1498 aa18.31■□□□□ 0.52
MRPS18B-208ENST00000472267 CHIC1Q5VXU3 224 aa18.31■□□□□ 0.52
MRPS18B-208ENST00000472267 HMGXB3Q12766 1538 aa18.29■□□□□ 0.52
MRPS18B-208ENST00000472267 AEBP2Q6ZN18 517 aaPredicted RBP18.04■□□□□ 0.48
MRPS18B-208ENST00000472267 TRIM41Q8WV44 630 aa18.04■□□□□ 0.48
MRPS18B-208ENST00000472267 ABCC8Q09428 1581 aa17.98■□□□□ 0.47
MRPS18B-208ENST00000472267 DNAJC5BQ9UF47 199 aa17.91■□□□□ 0.46
MRPS18B-208ENST00000472267 CFTRP13569 1480 aa17.91■□□□□ 0.46
MRPS18B-208ENST00000472267 CADPSQ9ULU8 1353 aa17.87■□□□□ 0.45
MRPS18B-208ENST00000472267 PRDM2Q13029 1718 aa17.84■□□□□ 0.45
MRPS18B-208ENST00000472267 WRNQ14191 1432 aaPredicted RBP eCLIP17.83■□□□□ 0.45
MRPS18B-208ENST00000472267 NESP48681 1621 aa17.77■□□□□ 0.44
MRPS18B-208ENST00000472267 SYNJ1O43426 1573 aa17.77■□□□□ 0.44
MRPS18B-208ENST00000472267 FAM9AQ8IZU1 332 aaPredicted RBP17.76■□□□□ 0.43
MRPS18B-208ENST00000472267 LAMC3Q9Y6N6 1575 aa17.72■□□□□ 0.43
MRPS18B-208ENST00000472267 FANCD2Q9BXW9 1451 aa17.69■□□□□ 0.42
MRPS18B-208ENST00000472267 TOP2BQ02880 1626 aa17.68■□□□□ 0.42
MRPS18B-208ENST00000472267 BIVM-ERCC5R4GMW8 1640 aa17.67■□□□□ 0.42
MRPS18B-208ENST00000472267 CUX1P39880 1505 aa17.67■□□□□ 0.42
MRPS18B-208ENST00000472267 LOC105371045A0A1W2PR82 267 aa17.65■□□□□ 0.42
MRPS18B-208ENST00000472267 SOGA1O94964 1423 aa17.61■□□□□ 0.41
MRPS18B-208ENST00000472267 PDS5BQ9NTI5 1447 aa17.6■□□□□ 0.41
MRPS18B-208ENST00000472267 CEP164Q9UPV0 1460 aa17.59■□□□□ 0.41
MRPS18B-208ENST00000472267 EHMT2Q96KQ7 1210 aa17.57■□□□□ 0.4
MRPS18B-208ENST00000472267 RUSC2Q8N2Y8 1516 aa17.56■□□□□ 0.4
MRPS18B-208ENST00000472267 KIF21AQ7Z4S6 1674 aa17.56■□□□□ 0.4
MRPS18B-208ENST00000472267 EEA1Q15075 1411 aa17.52■□□□□ 0.4
MRPS18B-208ENST00000472267 DNMBPQ6XZF7 1577 aa17.52■□□□□ 0.39
MRPS18B-208ENST00000472267 TOPBP1Q92547 1522 aa17.49■□□□□ 0.39
MRPS18B-208ENST00000472267 FGD5Q6ZNL6 1462 aa17.48■□□□□ 0.39
MRPS18B-208ENST00000472267 CSRNP3Q8WYN3 585 aa17.48■□□□□ 0.39
MRPS18B-208ENST00000472267 URB2Q14146 1524 aaKnown RBP17.47■□□□□ 0.39
MRPS18B-208ENST00000472267 POLA1P09884 1462 aaPredicted RBP17.4■□□□□ 0.38
MRPS18B-208ENST00000472267 ERCC6Q03468 1493 aa17.39■□□□□ 0.37
MRPS18B-208ENST00000472267 KIF27Q86VH2 1401 aa17.39■□□□□ 0.37
MRPS18B-208ENST00000472267 MRC2Q9UBG0 1479 aa17.38■□□□□ 0.37
MRPS18B-208ENST00000472267 CUX2O14529 1486 aa17.38■□□□□ 0.37
MRPS18B-208ENST00000472267 RAD54L2Q9Y4B4 1467 aa17.37■□□□□ 0.37
MRPS18B-208ENST00000472267 KIF21BO75037 1637 aa17.32■□□□□ 0.36
MRPS18B-208ENST00000472267 GOLGA3Q08378 1498 aa17.32■□□□□ 0.36
MRPS18B-208ENST00000472267 UBTFP17480 764 aaKnown RBP17.3■□□□□ 0.36
MRPS18B-208ENST00000472267 ABCA10Q8WWZ4 1543 aa17.3■□□□□ 0.36
MRPS18B-208ENST00000472267 WDR62O43379 1518 aa17.27■□□□□ 0.36
MRPS18B-208ENST00000472267 WDR97A6NE52 1622 aa17.26■□□□□ 0.35
MRPS18B-208ENST00000472267 RAPGEF2Q9Y4G8 1499 aa17.25■□□□□ 0.35
MRPS18B-208ENST00000472267 THOC2Q8NI27 1593 aaKnown RBP17.24■□□□□ 0.35
MRPS18B-208ENST00000472267 TNIKQ9UKE5 1360 aa17.24■□□□□ 0.35
MRPS18B-208ENST00000472267 IGF1RP08069 1367 aa17.23■□□□□ 0.35
MRPS18B-208ENST00000472267 PRXQ9BXM0 1461 aa17.23■□□□□ 0.35
MRPS18B-208ENST00000472267 TARBP1Q13395 1621 aaKnown RBP17.22■□□□□ 0.35
MRPS18B-208ENST00000472267 TDRD9Q8NDG6 1382 aaKnown RBP17.21■□□□□ 0.35
MRPS18B-208ENST00000472267 ERICH3Q5RHP9 1530 aa17.19■□□□□ 0.34
MRPS18B-208ENST00000472267 ABCA5Q8WWZ7 1642 aa17.17■□□□□ 0.34
MRPS18B-208ENST00000472267 CEP162Q5TB80 1403 aa17.16■□□□□ 0.34
MRPS18B-208ENST00000472267 CARMIL1Q5VZK9 1371 aa17.16■□□□□ 0.34
MRPS18B-208ENST00000472267 GAPVD1Q14C86 1478 aa17.16■□□□□ 0.34
MRPS18B-208ENST00000472267 IFT140Q96RY7 1462 aa17.16■□□□□ 0.34
MRPS18B-208ENST00000472267 CUL7Q14999 1698 aa17.11■□□□□ 0.33
MRPS18B-208ENST00000472267 AQRO60306 1485 aaKnown RBP eCLIP17.1■□□□□ 0.334e-8■■■■■ 38.5
MRPS18B-208ENST00000472267 RANGAP1P46060 587 aaPredicted RBP17.1■□□□□ 0.33
MRPS18B-208ENST00000472267 ZNF608Q9ULD9 1512 aaPredicted RBP17.09■□□□□ 0.33
MRPS18B-208ENST00000472267 PBRM1Q86U86 1689 aa17.09■□□□□ 0.33
MRPS18B-208ENST00000472267 CLIP1P30622 1438 aa17.05■□□□□ 0.32
MRPS18B-208ENST00000472267 GRIN2BQ13224 1484 aa17.02■□□□□ 0.32
MRPS18B-208ENST00000472267 EIF4G3O43432 1585 aaKnown RBP17.02■□□□□ 0.32
MRPS18B-208ENST00000472267 ADAMTS12P58397 1594 aa16.97■□□□□ 0.31
MRPS18B-208ENST00000472267 FHAD1B1AJZ9 1412 aa16.96■□□□□ 0.31
MRPS18B-208ENST00000472267 SNAPC4Q5SXM2 1469 aa16.94■□□□□ 0.3
MRPS18B-208ENST00000472267 CTTNBP2Q8WZ74 1663 aa16.93■□□□□ 0.3
MRPS18B-208ENST00000472267 PPARGC1BQ86YN6 1023 aaKnown RBP16.88■□□□□ 0.29
MRPS18B-208ENST00000472267 ARAP1Q96P48 1450 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms