RNA–Protein interactions for RNA: ENST00000589644.1

YIF1B-212, Transcript of Yip1 interacting factor homolog B, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1B, Length 1,917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1B-212ENST00000589644 NISCHQ9Y2I1 1504 aa43.16■■■■■ 4.5
YIF1B-212ENST00000589644 CCDC180Q9P1Z9 1646 aa37.78■■■■□ 3.64
YIF1B-212ENST00000589644 ZCCHC6Q5VYS8 1495 aaKnown RBP36.22■■■■□ 3.39
YIF1B-212ENST00000589644 ABCC9O60706 1549 aa35.89■■■■□ 3.34
YIF1B-212ENST00000589644 DCAF1Q9Y4B6 1507 aa35.76■■■■□ 3.32
YIF1B-212ENST00000589644 DCAF8L2P0C7V8 631 aa35.61■■■■□ 3.29
YIF1B-212ENST00000589644 MYO15BQ96JP2 1530 aa35.47■■■■□ 3.27
YIF1B-212ENST00000589644 SHROOM4Q9ULL8 1493 aa35.3■■■■□ 3.24
YIF1B-212ENST00000589644 NACADO15069 1562 aa35.27■■■■□ 3.24
YIF1B-212ENST00000589644 RB1CC1Q8TDY2 1594 aa35.01■■■■□ 3.19
YIF1B-212ENST00000589644 SCRIBQ14160 1630 aa34.61■■■■□ 3.13
YIF1B-212ENST00000589644 UNC13AQ9UPW8 1703 aa34.16■■■■□ 3.06
YIF1B-212ENST00000589644 SUPT5HO00267 1087 aaKnown RBP34.04■■■■□ 3.04
YIF1B-212ENST00000589644 BICRAQ9NZM4 1560 aa33.91■■■■□ 3.02
YIF1B-212ENST00000589644 PABPN1Q86U42 306 aaKnown RBP eCLIP33.77■■■■□ 3
YIF1B-212ENST00000589644 CECR2Q9BXF3 1484 aa33.5■■■□□ 2.95
YIF1B-212ENST00000589644 RSF1Q96T23 1441 aaPredicted RBP33.41■■■□□ 2.94
YIF1B-212ENST00000589644 BAZ1AQ9NRL2 1556 aaPredicted RBP33.36■■■□□ 2.93
YIF1B-212ENST00000589644 MROH2BQ7Z745 1585 aa33.29■■■□□ 2.92
YIF1B-212ENST00000589644 SMARCA4P51532 1647 aa33.21■■■□□ 2.91
YIF1B-212ENST00000589644 WIZO95785 1651 aa32.98■■■□□ 2.87
YIF1B-212ENST00000589644 EIF4G1Q04637 1599 aaKnown RBP32.93■■■□□ 2.86
YIF1B-212ENST00000589644 PEG3Q9GZU2 1588 aa32.88■■■□□ 2.85
YIF1B-212ENST00000589644 ATAD2BQ9ULI0 1458 aa32.77■■■□□ 2.84
YIF1B-212ENST00000589644 SMARCA2P51531 1590 aa32.76■■■□□ 2.83
YIF1B-212ENST00000589644 TOP2AP11388 1531 aaKnown RBP32.7■■■□□ 2.83
YIF1B-212ENST00000589644 CHIC1Q5VXU3 224 aa32.63■■■□□ 2.81
YIF1B-212ENST00000589644 NCAPD3P42695 1498 aa32.57■■■□□ 2.8
YIF1B-212ENST00000589644 BAZ1BQ9UIG0 1483 aaKnown RBP32.55■■■□□ 2.8
YIF1B-212ENST00000589644 HMGXB3Q12766 1538 aa32.49■■■□□ 2.79
YIF1B-212ENST00000589644 CC2D2AQ9P2K1 1620 aa32.49■■■□□ 2.79
YIF1B-212ENST00000589644 CCDC88BA6NC98 1476 aa32.34■■■□□ 2.77
YIF1B-212ENST00000589644 DNAJC5BQ9UF47 199 aa32.04■■■□□ 2.72
YIF1B-212ENST00000589644 TRIM41Q8WV44 630 aa31.92■■■□□ 2.7
YIF1B-212ENST00000589644 CFTRP13569 1480 aa31.75■■■□□ 2.67
YIF1B-212ENST00000589644 CADPSQ9ULU8 1353 aa31.69■■■□□ 2.66
YIF1B-212ENST00000589644 ABCC8Q09428 1581 aa31.69■■■□□ 2.66
YIF1B-212ENST00000589644 PRDM2Q13029 1718 aa31.49■■■□□ 2.63
YIF1B-212ENST00000589644 LOC105371045A0A1W2PR82 267 aa31.48■■■□□ 2.63
YIF1B-212ENST00000589644 LAMC3Q9Y6N6 1575 aa31.47■■■□□ 2.63
YIF1B-212ENST00000589644 FAM9AQ8IZU1 332 aaPredicted RBP31.45■■■□□ 2.62
YIF1B-212ENST00000589644 WRNQ14191 1432 aaPredicted RBP eCLIP31.44■■■□□ 2.62
YIF1B-212ENST00000589644 NESP48681 1621 aa31.4■■■□□ 2.62
YIF1B-212ENST00000589644 FANCD2Q9BXW9 1451 aa31.32■■■□□ 2.6
YIF1B-212ENST00000589644 SYNJ1O43426 1573 aa31.29■■■□□ 2.6
YIF1B-212ENST00000589644 PDS5BQ9NTI5 1447 aa31.26■■■□□ 2.59
YIF1B-212ENST00000589644 TOP2BQ02880 1626 aa31.2■■■□□ 2.59
YIF1B-212ENST00000589644 BIVM-ERCC5R4GMW8 1640 aa31.18■■■□□ 2.58
YIF1B-212ENST00000589644 CUX1P39880 1505 aa31.16■■■□□ 2.58
YIF1B-212ENST00000589644 SOGA1O94964 1423 aa31.16■■■□□ 2.58
YIF1B-212ENST00000589644 CEP164Q9UPV0 1460 aa31.15■■■□□ 2.58
YIF1B-212ENST00000589644 EHMT2Q96KQ7 1210 aa31.08■■■□□ 2.57
YIF1B-212ENST00000589644 RUSC2Q8N2Y8 1516 aa31.07■■■□□ 2.56
YIF1B-212ENST00000589644 EEA1Q15075 1411 aa31.04■■■□□ 2.56
YIF1B-212ENST00000589644 KIF21AQ7Z4S6 1674 aa31.01■■■□□ 2.55
YIF1B-212ENST00000589644 DNMBPQ6XZF7 1577 aa30.99■■■□□ 2.55
YIF1B-212ENST00000589644 TOPBP1Q92547 1522 aa30.94■■■□□ 2.54
YIF1B-212ENST00000589644 URB2Q14146 1524 aaKnown RBP30.92■■■□□ 2.54
YIF1B-212ENST00000589644 CSRNP3Q8WYN3 585 aa30.91■■■□□ 2.54
YIF1B-212ENST00000589644 FGD5Q6ZNL6 1462 aa30.87■■■□□ 2.53
YIF1B-212ENST00000589644 MRC2Q9UBG0 1479 aa30.86■■■□□ 2.53
YIF1B-212ENST00000589644 ERCC6Q03468 1493 aa30.83■■■□□ 2.53
YIF1B-212ENST00000589644 POLA1P09884 1462 aaPredicted RBP30.77■■■□□ 2.52
YIF1B-212ENST00000589644 WDR62O43379 1518 aa30.7■■■□□ 2.51
YIF1B-212ENST00000589644 KIF27Q86VH2 1401 aa30.67■■■□□ 2.5
YIF1B-212ENST00000589644 ABCA10Q8WWZ4 1543 aa30.63■■■□□ 2.49
YIF1B-212ENST00000589644 THOC2Q8NI27 1593 aaKnown RBP30.63■■■□□ 2.49
YIF1B-212ENST00000589644 KIF21BO75037 1637 aa30.62■■■□□ 2.49
YIF1B-212ENST00000589644 RAD54L2Q9Y4B4 1467 aa30.62■■■□□ 2.49
YIF1B-212ENST00000589644 CUX2O14529 1486 aa30.62■■■□□ 2.49
YIF1B-212ENST00000589644 GOLGA3Q08378 1498 aa30.6■■■□□ 2.49
YIF1B-212ENST00000589644 UBTFP17480 764 aaKnown RBP30.55■■■□□ 2.48
YIF1B-212ENST00000589644 TNIKQ9UKE5 1360 aa30.54■■■□□ 2.48
YIF1B-212ENST00000589644 WDR97A6NE52 1622 aa30.49■■■□□ 2.47
YIF1B-212ENST00000589644 TARBP1Q13395 1621 aaKnown RBP30.49■■■□□ 2.47
YIF1B-212ENST00000589644 RAPGEF2Q9Y4G8 1499 aa30.48■■■□□ 2.47
YIF1B-212ENST00000589644 IFT140Q96RY7 1462 aa30.45■■■□□ 2.47
YIF1B-212ENST00000589644 PRXQ9BXM0 1461 aa30.43■■■□□ 2.46
YIF1B-212ENST00000589644 IGF1RP08069 1367 aa30.42■■■□□ 2.46
YIF1B-212ENST00000589644 ERICH3Q5RHP9 1530 aa30.42■■■□□ 2.46
YIF1B-212ENST00000589644 CEP162Q5TB80 1403 aa30.4■■■□□ 2.46
YIF1B-212ENST00000589644 ABCA5Q8WWZ7 1642 aa30.36■■■□□ 2.45
YIF1B-212ENST00000589644 TDRD9Q8NDG6 1382 aaKnown RBP30.36■■■□□ 2.45
YIF1B-212ENST00000589644 GAPVD1Q14C86 1478 aa30.33■■■□□ 2.45
YIF1B-212ENST00000589644 CARMIL1Q5VZK9 1371 aa30.25■■■□□ 2.43
YIF1B-212ENST00000589644 ZNF608Q9ULD9 1512 aaPredicted RBP30.22■■■□□ 2.43
YIF1B-212ENST00000589644 AQRO60306 1485 aaKnown RBP eCLIP30.21■■■□□ 2.435e-7■■■■□ 20
YIF1B-212ENST00000589644 CUL7Q14999 1698 aa30.2■■■□□ 2.43
YIF1B-212ENST00000589644 GRIN2BQ13224 1484 aa30.16■■■□□ 2.42
YIF1B-212ENST00000589644 CLIP1P30622 1438 aa30.13■■■□□ 2.41
YIF1B-212ENST00000589644 RANGAP1P46060 587 aaPredicted RBP30.12■■■□□ 2.41
YIF1B-212ENST00000589644 PCGF6Q9BYE7 350 aa30.12■■■□□ 2.41
YIF1B-212ENST00000589644 EIF4G3O43432 1585 aaKnown RBP30.12■■■□□ 2.41
YIF1B-212ENST00000589644 PBRM1Q86U86 1689 aa30.11■■■□□ 2.41
YIF1B-212ENST00000589644 FHAD1B1AJZ9 1412 aa30.03■■■□□ 2.4
YIF1B-212ENST00000589644 PPARGC1BQ86YN6 1023 aaKnown RBP30.03■■■□□ 2.4
YIF1B-212ENST00000589644 ADAMTS12P58397 1594 aa30■■■□□ 2.39
YIF1B-212ENST00000589644 TRIM26Q12899 539 aaPredicted RBP29.99■■■□□ 2.39
YIF1B-212ENST00000589644 SNAPC4Q5SXM2 1469 aa29.95■■■□□ 2.38
YIF1B-212ENST00000589644 MAGI1Q96QZ7 1491 aaPredicted RBP29.95■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms