RNA–Protein interactions for RNA: ENST00000524863.5

SLC43A3-204, Transcript of solute carrier family 43 member 3, humanhuman

TSL 3

Gene SLC43A3, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A3-204ENST00000524863 NISCHQ9Y2I1 1504 aa33.68■■■□□ 2.98
SLC43A3-204ENST00000524863 CCDC180Q9P1Z9 1646 aa30.07■■■□□ 2.4
SLC43A3-204ENST00000524863 ABCC9O60706 1549 aa29.45■■■□□ 2.3
SLC43A3-204ENST00000524863 RB1CC1Q8TDY2 1594 aa28.38■■■□□ 2.13
SLC43A3-204ENST00000524863 NACADO15069 1562 aa28.34■■■□□ 2.13
SLC43A3-204ENST00000524863 MYO15BQ96JP2 1530 aa28.23■■■□□ 2.11
SLC43A3-204ENST00000524863 ZCCHC6Q5VYS8 1495 aaKnown RBP28.03■■■□□ 2.08
SLC43A3-204ENST00000524863 DCAF8L2P0C7V8 631 aa28■■■□□ 2.07
SLC43A3-204ENST00000524863 DCAF1Q9Y4B6 1507 aa27.99■■■□□ 2.07
SLC43A3-204ENST00000524863 UNC13AQ9UPW8 1703 aa27.58■■■□□ 2.01
SLC43A3-204ENST00000524863 BICRAQ9NZM4 1560 aa27.47■■□□□ 1.99
SLC43A3-204ENST00000524863 PABPN1Q86U42 306 aaKnown RBP eCLIP27.43■■□□□ 1.98
SLC43A3-204ENST00000524863 SHROOM4Q9ULL8 1493 aa27.41■■□□□ 1.98
SLC43A3-204ENST00000524863 SCRIBQ14160 1630 aa27.25■■□□□ 1.95
SLC43A3-204ENST00000524863 DNAJC5BQ9UF47 199 aa27.17■■□□□ 1.94
SLC43A3-204ENST00000524863 EIF4G1Q04637 1599 aaKnown RBP26.78■■□□□ 1.88
SLC43A3-204ENST00000524863 CC2D2AQ9P2K1 1620 aa26.67■■□□□ 1.86
SLC43A3-204ENST00000524863 CECR2Q9BXF3 1484 aa26.56■■□□□ 1.84
SLC43A3-204ENST00000524863 NCAPD3P42695 1498 aa26.17■■□□□ 1.78
SLC43A3-204ENST00000524863 BAZ1AQ9NRL2 1556 aaPredicted RBP26.15■■□□□ 1.78
SLC43A3-204ENST00000524863 SMARCA4P51532 1647 aa26.14■■□□□ 1.77
SLC43A3-204ENST00000524863 SMARCA2P51531 1590 aa26.09■■□□□ 1.77
SLC43A3-204ENST00000524863 ATAD2BQ9ULI0 1458 aa26.08■■□□□ 1.77
SLC43A3-204ENST00000524863 HMGXB3Q12766 1538 aa26.02■■□□□ 1.76
SLC43A3-204ENST00000524863 PEG3Q9GZU2 1588 aa26■■□□□ 1.75
SLC43A3-204ENST00000524863 MROH2BQ7Z745 1585 aa25.87■■□□□ 1.73
SLC43A3-204ENST00000524863 BAZ1BQ9UIG0 1483 aaKnown RBP25.85■■□□□ 1.73
SLC43A3-204ENST00000524863 RSF1Q96T23 1441 aaPredicted RBP25.55■■□□□ 1.68
SLC43A3-204ENST00000524863 WIZO95785 1651 aa25.52■■□□□ 1.68
SLC43A3-204ENST00000524863 LAMC3Q9Y6N6 1575 aa25.48■■□□□ 1.67
SLC43A3-204ENST00000524863 ERCC6Q03468 1493 aa25.46■■□□□ 1.67
SLC43A3-204ENST00000524863 NESP48681 1621 aa25.41■■□□□ 1.66
SLC43A3-204ENST00000524863 CUX2O14529 1486 aa25.38■■□□□ 1.65
SLC43A3-204ENST00000524863 TOP2AP11388 1531 aaKnown RBP25.37■■□□□ 1.65
SLC43A3-204ENST00000524863 CADPSQ9ULU8 1353 aa25.34■■□□□ 1.65
SLC43A3-204ENST00000524863 PDS5BQ9NTI5 1447 aa25.32■■□□□ 1.64
SLC43A3-204ENST00000524863 CFTRP13569 1480 aa25.18■■□□□ 1.62
SLC43A3-204ENST00000524863 THOC2Q8NI27 1593 aaKnown RBP25.15■■□□□ 1.62
SLC43A3-204ENST00000524863 KIF21AQ7Z4S6 1674 aa25.1■■□□□ 1.61
SLC43A3-204ENST00000524863 MRC2Q9UBG0 1479 aa25.03■■□□□ 1.6
SLC43A3-204ENST00000524863 CEP164Q9UPV0 1460 aa25.02■■□□□ 1.6
SLC43A3-204ENST00000524863 CCDC88BA6NC98 1476 aa25.02■■□□□ 1.6
SLC43A3-204ENST00000524863 FANCD2Q9BXW9 1451 aa25.02■■□□□ 1.6
SLC43A3-204ENST00000524863 WDR62O43379 1518 aa24.97■■□□□ 1.59
SLC43A3-204ENST00000524863 PRDM2Q13029 1718 aa24.89■■□□□ 1.57
SLC43A3-204ENST00000524863 DNAJC5Q9H3Z4 198 aa24.76■■□□□ 1.55
SLC43A3-204ENST00000524863 URB2Q14146 1524 aaKnown RBP24.75■■□□□ 1.55
SLC43A3-204ENST00000524863 ABCC8Q09428 1581 aa24.7■■□□□ 1.54
SLC43A3-204ENST00000524863 TOPBP1Q92547 1522 aa24.59■■□□□ 1.53
SLC43A3-204ENST00000524863 SUPT5HO00267 1087 aaKnown RBP24.58■■□□□ 1.53
SLC43A3-204ENST00000524863 DNMBPQ6XZF7 1577 aa24.57■■□□□ 1.52
SLC43A3-204ENST00000524863 IFT140Q96RY7 1462 aa24.54■■□□□ 1.52
SLC43A3-204ENST00000524863 POLA1P09884 1462 aaPredicted RBP24.38■■□□□ 1.49
SLC43A3-204ENST00000524863 TARBP1Q13395 1621 aaKnown RBP24.33■■□□□ 1.49
SLC43A3-204ENST00000524863 ZNF608Q9ULD9 1512 aaPredicted RBP24.33■■□□□ 1.49
SLC43A3-204ENST00000524863 CUX1P39880 1505 aa24.3■■□□□ 1.48
SLC43A3-204ENST00000524863 WDR97A6NE52 1622 aa24.28■■□□□ 1.48
SLC43A3-204ENST00000524863 EIF4G3O43432 1585 aaKnown RBP24.26■■□□□ 1.47
SLC43A3-204ENST00000524863 SOGA1O94964 1423 aa24.26■■□□□ 1.47
SLC43A3-204ENST00000524863 FGD5Q6ZNL6 1462 aa24.26■■□□□ 1.47
SLC43A3-204ENST00000524863 OSCARQ8IYS5 282 aa24.22■■□□□ 1.47
SLC43A3-204ENST00000524863 RAD54L2Q9Y4B4 1467 aa24.18■■□□□ 1.46
SLC43A3-204ENST00000524863 AQRO60306 1485 aaKnown RBP eCLIP24.16■■□□□ 1.464e-10■■■■■ 37.7
SLC43A3-204ENST00000524863 WRNQ14191 1432 aaPredicted RBP eCLIP24.11■■□□□ 1.45
SLC43A3-204ENST00000524863 TDRD9Q8NDG6 1382 aaKnown RBP24.09■■□□□ 1.45
SLC43A3-204ENST00000524863 TOP2BQ02880 1626 aa24.09■■□□□ 1.45
SLC43A3-204ENST00000524863 ABCA10Q8WWZ4 1543 aa24.09■■□□□ 1.45
SLC43A3-204ENST00000524863 BIVM-ERCC5R4GMW8 1640 aa24.07■■□□□ 1.44
SLC43A3-204ENST00000524863 GRIN2BQ13224 1484 aa24.04■■□□□ 1.44
SLC43A3-204ENST00000524863 MAGI1Q96QZ7 1491 aaPredicted RBP24.04■■□□□ 1.44
SLC43A3-204ENST00000524863 GAPVD1Q14C86 1478 aa23.99■■□□□ 1.43
SLC43A3-204ENST00000524863 SYNJ1O43426 1573 aa23.99■■□□□ 1.43
SLC43A3-204ENST00000524863 ABCA5Q8WWZ7 1642 aa23.96■■□□□ 1.43
SLC43A3-204ENST00000524863 SNAPC4Q5SXM2 1469 aa23.96■■□□□ 1.43
SLC43A3-204ENST00000524863 CHD1O14646 1710 aa23.92■■□□□ 1.42
SLC43A3-204ENST00000524863 SYNJ2O15056 1496 aa23.92■■□□□ 1.42
SLC43A3-204ENST00000524863 PBRM1Q86U86 1689 aa23.87■■□□□ 1.41
SLC43A3-204ENST00000524863 FBLN2P98095 1184 aa23.86■■□□□ 1.41
SLC43A3-204ENST00000524863 CHMP7Q8WUX9 453 aaPredicted RBP23.86■■□□□ 1.41
SLC43A3-204ENST00000524863 ERICH3Q5RHP9 1530 aa23.81■■□□□ 1.4
SLC43A3-204ENST00000524863 ARHGEF11O15085 1522 aa23.8■■□□□ 1.4
SLC43A3-204ENST00000524863 CLASP1Q7Z460 1538 aa23.78■■□□□ 1.4
SLC43A3-204ENST00000524863 RIMBP3CA6NJZ7 1639 aa23.77■■□□□ 1.4
SLC43A3-204ENST00000524863 RIMBP3BA6NNM3 1639 aa23.77■■□□□ 1.4
SLC43A3-204ENST00000524863 RIMBP3Q9UFD9 1639 aa23.77■■□□□ 1.4
SLC43A3-204ENST00000524863 FHAD1B1AJZ9 1412 aa23.75■■□□□ 1.39
SLC43A3-204ENST00000524863 ADAMTS12P58397 1594 aa23.74■■□□□ 1.39
SLC43A3-204ENST00000524863 GRIN2AQ12879 1464 aa23.71■■□□□ 1.39
SLC43A3-204ENST00000524863 TRIM41Q8WV44 630 aa23.69■■□□□ 1.38
SLC43A3-204ENST00000524863 NUP160Q12769 1436 aa23.66■■□□□ 1.38
SLC43A3-204ENST00000524863 KIF27Q86VH2 1401 aa23.66■■□□□ 1.38
SLC43A3-204ENST00000524863 ARAP1Q96P48 1450 aa23.58■■□□□ 1.37
SLC43A3-204ENST00000524863 IGF1RP08069 1367 aa23.55■■□□□ 1.36
SLC43A3-204ENST00000524863 CEP170Q5SW79 1584 aa23.54■■□□□ 1.36
SLC43A3-204ENST00000524863 CUL7Q14999 1698 aa23.52■■□□□ 1.36
SLC43A3-204ENST00000524863 CYB5RLQ6IPT4 315 aa23.52■■□□□ 1.36
SLC43A3-204ENST00000524863 SHROOM2Q13796 1616 aa23.48■■□□□ 1.35
SLC43A3-204ENST00000524863 CARMIL1Q5VZK9 1371 aa23.4■■□□□ 1.34
SLC43A3-204ENST00000524863 RUSC2Q8N2Y8 1516 aa23.4■■□□□ 1.34
SLC43A3-204ENST00000524863 KIAA0586Q9BVV6 1533 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms