Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.771e-7■■■□□ 15
NCBP2P52298 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.53■□□□□ 0.723e-14■■■□□ 15
NCBP2P52298 GNB1L-204ENST00000453108 702 ntTSL 319.25■□□□□ 0.671e-7■■■□□ 15
NCBP2P52298 METTL9-203ENST00000562379 701 ntTSL 217.78■□□□□ 0.441e-7■■■□□ 15
NCBP2P52298 ZNF607-205ENST00000591664 741 ntTSL 517.74■□□□□ 0.431e-7■■■□□ 15
NCBP2P52298 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17■□□□□ 0.313e-14■■■□□ 15
NCBP2P52298 GNB1L-206ENST00000481086 854 ntTSL 316.96■□□□□ 0.311e-7■■■□□ 15
NCBP2P52298 RTL10-204ENST00000416337 730 ntAPPRIS ALT2 TSL 216.96■□□□□ 0.311e-7■■■□□ 15
NCBP2P52298 GNB1L-205ENST00000460402 1197 ntTSL 316.61■□□□□ 0.251e-7■■■□□ 15
NCBP2P52298 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.33■□□□□ 0.21e-7■■■□□ 15
NCBP2P52298 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.191e-7■■■□□ 15
NCBP2P52298 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.85□□□□□ -0.031e-7■■■□□ 15
NCBP2P52298 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.131e-7■■■□□ 15
NCBP2P52298 BAIAP2-206ENST00000570913 559 ntTSL 414.14□□□□□ -0.151e-7■■■□□ 15
NCBP2P52298 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.11□□□□□ -0.153e-14■■■□□ 15
NCBP2P52298 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.261e-7■■■□□ 15
NCBP2P52298 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC12.99□□□□□ -0.331e-7■■■□□ 15
NCBP2P52298 CDK7-214ENST00000626796 358 ntTSL 5 BASIC12.99□□□□□ -0.331e-7■■■□□ 15
NCBP2P52298 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC12.79□□□□□ -0.363e-14■■■□□ 15
NCBP2P52298 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.371e-7■■■□□ 15
NCBP2P52298 NIPA1-203ENST00000557930 582 ntTSL 212.52□□□□□ -0.411e-7■■■□□ 15
NCBP2P52298 RTL10-205ENST00000484072 1385 ntTSL 212.47□□□□□ -0.411e-7■■■□□ 15
NCBP2P52298 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.421e-7■■■□□ 15
NCBP2P52298 CDK7-213ENST00000515391 809 ntTSL 211.97□□□□□ -0.491e-7■■■□□ 15
NCBP2P52298 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC11.97□□□□□ -0.491e-7■■■□□ 15
NCBP2P52298 CDK7-212ENST00000515180 486 ntTSL 311.97□□□□□ -0.491e-7■■■□□ 15
NCBP2P52298 CDK7-204ENST00000506563 728 ntTSL 511.95□□□□□ -0.51e-7■■■□□ 15
NCBP2P52298 CDK7-207ENST00000510106 818 ntTSL 311.91□□□□□ -0.51e-7■■■□□ 15
NCBP2P52298 CDK7-201ENST00000256443 1439 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.51e-7■■■□□ 15
NCBP2P52298 CDK7-205ENST00000506789 477 ntTSL 511.87□□□□□ -0.511e-7■■■□□ 15
NCBP2P52298 CDK7-209ENST00000512985 261 ntTSL 211.87□□□□□ -0.511e-7■■■□□ 15
NCBP2P52298 DLEU2-202ENST00000421758 692 ntTSL 1 (best)11.44□□□□□ -0.583e-14■■■□□ 15
NCBP2P52298 CDK7-208ENST00000512687 905 ntTSL 1 (best)10.95□□□□□ -0.661e-7■■■□□ 15
NCBP2P52298 DLEU2-204ENST00000433070 698 ntTSL 1 (best)10.66□□□□□ -0.73e-14■■■□□ 15
NCBP2P52298 DLEU2-207ENST00000458725 1657 ntTSL 210.61□□□□□ -0.713e-14■■■□□ 15
NCBP2P52298 RTL10-203ENST00000407472 6523 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.761e-7■■■□□ 15
NCBP2P52298 NIPA1-204ENST00000559448 2799 ntTSL 29.83□□□□□ -0.841e-7■■■□□ 15
NCBP2P52298 CDK7-203ENST00000504147 722 ntTSL 59.69□□□□□ -0.861e-7■■■□□ 15
NCBP2P52298 NIPA1-206ENST00000560105 375 ntTSL 29.09□□□□□ -0.951e-7■■■□□ 15
NCBP2P52298 DLEU2-206ENST00000449579 791 ntTSL 28.95□□□□□ -0.983e-14■■■□□ 15
NCBP2P52298 CLHC1-207ENST00000428621 2052 ntTSL 27.59□□□□□ -1.191e-7■■■□□ 15
NCBP2P52298 CDK7-206ENST00000508726 531 ntTSL 56.87□□□□□ -1.311e-7■■■□□ 15
NCBP2P52298 METTL9-207ENST00000567404 763 ntTSL 34.6□□□□□ -1.671e-7■■■□□ 15
NCBP2P52298 CLHC1-208ENST00000451916 616 ntTSL 34.2□□□□□ -1.741e-7■■■□□ 15
NCBP2P52298 CLHC1-209ENST00000463300 572 ntTSL 43.85□□□□□ -1.791e-7■■■□□ 15
NCBP2P52298 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.74□□□□□ -1.811e-7■■■□□ 15
NCBP2P52298 CLHC1-212ENST00000487320 594 ntTSL 43.41□□□□□ -1.861e-7■■■□□ 15
NCBP2P52298 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.931e-7■■■□□ 15
NCBP2P52298 CLHC1-213ENST00000494539 596 ntTSL 42.17□□□□□ -2.061e-7■■■□□ 15
NCBP2P52298 CLHC1-210ENST00000464243 509 ntTSL 41.43□□□□□ -2.181e-7■■■□□ 15
NCBP2P52298 CLHC1-211ENST00000466020 153 ntTSL 50.33□□□□□ -2.361e-7■■■□□ 15
NCBP2P52298 OBSL1-209ENST00000465589 571 ntTSL 317.55■□□□□ 0.42e-10■■■□□ 15
NCBP2P52298 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.68■□□□□ 0.262e-10■■■□□ 15
NCBP2P52298 FAM178B-205ENST00000494172 592 ntTSL 316.59■□□□□ 0.253e-10■■■□□ 15
NCBP2P52298 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.193e-10■■■□□ 15
NCBP2P52298 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.53e-10■■■□□ 15
NCBP2P52298 FAM178B-202ENST00000470789 722 ntTSL 1 (best)10.46□□□□□ -0.733e-10■■■□□ 15
NCBP2P52298 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.49■□□□□ 0.233e-12■■■□□ 15
NCBP2P52298 DANCR-202ENST00000425653 823 ntTSL 1 (best)15.48■□□□□ 0.073e-12■■■□□ 15
NCBP2P52298 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.51■□□□□ 0.392e-6■■■□□ 15
NCBP2P52298 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC6.62□□□□□ -1.352e-9■■■□□ 15
NCBP2P52298 CTAGE5-213ENST00000555716 558 ntTSL 46.05□□□□□ -1.446e-8■■■□□ 14.9
NCBP2P52298 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.55□□□□□ -1.526e-8■■■□□ 14.9
NCBP2P52298 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.52□□□□□ -1.536e-8■■■□□ 14.9
NCBP2P52298 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.33□□□□□ -1.566e-8■■■□□ 14.9
NCBP2P52298 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5□□□□□ -1.616e-8■■■□□ 14.9
NCBP2P52298 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.616e-8■■■□□ 14.9
NCBP2P52298 CTAGE5-211ENST00000554392 527 ntTSL 43.53□□□□□ -1.846e-8■■■□□ 14.9
NCBP2P52298 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.49■□□□□ 0.551e-9■■■□□ 14.9
NCBP2P52298 INO80E-211ENST00000567987 1926 ntTSL 1 (best)17.78■□□□□ 0.441e-9■■■□□ 14.9
NCBP2P52298 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.381e-9■■■□□ 14.9
NCBP2P52298 INO80E-205ENST00000562441 1412 ntTSL 216.79■□□□□ 0.281e-9■■■□□ 14.9
NCBP2P52298 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.44■□□□□ 0.221e-9■■■□□ 14.9
NCBP2P52298 INO80E-212ENST00000568043 482 ntTSL 216.33■□□□□ 0.21e-9■■■□□ 14.9
NCBP2P52298 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.26■□□□□ 0.031e-9■■■□□ 14.9
NCBP2P52298 INO80E-206ENST00000563040 563 ntTSL 314.6□□□□□ -0.071e-9■■■□□ 14.9
NCBP2P52298 INO80E-202ENST00000380503 435 ntTSL 214.6□□□□□ -0.071e-9■■■□□ 14.9
NCBP2P52298 INO80E-208ENST00000567065 883 ntTSL 313.76□□□□□ -0.211e-9■■■□□ 14.9
NCBP2P52298 INO80E-203ENST00000540562 3064 ntTSL 213.38□□□□□ -0.271e-9■■■□□ 14.9
NCBP2P52298 INO80E-213ENST00000569957 4469 ntTSL 212.2□□□□□ -0.461e-9■■■□□ 14.9
NCBP2P52298 INO80E-209ENST00000567254 625 ntTSL 2 BASIC11.19□□□□□ -0.621e-9■■■□□ 14.9
NCBP2P52298 RPL22L1-203ENST00000466674 545 ntTSL 34.46□□□□□ -1.72e-7■■■□□ 14.9
NCBP2P52298 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.062e-7■■■□□ 14.9
NCBP2P52298 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.12e-16■■■□□ 14.9
NCBP2P52298 UBB-206ENST00000577958 376 ntTSL 213.91□□□□□ -0.182e-16■■■□□ 14.9
NCBP2P52298 UBB-207ENST00000578649 477 ntTSL 511.65□□□□□ -0.542e-16■■■□□ 14.9
NCBP2P52298 UBB-205ENST00000577640 724 ntTSL 59.37□□□□□ -0.912e-16■■■□□ 14.9
NCBP2P52298 UBB-204ENST00000535788 704 ntTSL 2 BASIC8.41□□□□□ -1.062e-16■■■□□ 14.9
NCBP2P52298 AL355987.4-202ENST00000459985 1900 ntTSL 221.98■■□□□ 1.116e-7■■■□□ 14.9
NCBP2P52298 BCAR1-217ENST00000566465 547 ntTSL 414.11□□□□□ -0.151e-8■■■□□ 14.9
NCBP2P52298 BCAR1-219ENST00000567215 581 ntTSL 413.15□□□□□ -0.31e-8■■■□□ 14.9
NCBP2P52298 DNM1L-217ENST00000548671 750 ntTSL 316.59■□□□□ 0.251e-7■■■□□ 14.9
NCBP2P52298 DNM1L-220ENST00000549701 2487 ntTSL 1 (best) BASIC12.38□□□□□ -0.431e-7■■■□□ 14.9
NCBP2P52298 DNM1L-225ENST00000551076 556 ntTSL 411.26□□□□□ -0.611e-7■■■□□ 14.9
NCBP2P52298 DNM1L-230ENST00000553257 2699 ntTSL 2 BASIC10.58□□□□□ -0.721e-7■■■□□ 14.9
NCBP2P52298 DNM1L-222ENST00000550011 576 ntTSL 49.24□□□□□ -0.931e-7■■■□□ 14.9
NCBP2P52298 DNM1L-208ENST00000546649 2097 ntTSL 28.77□□□□□ -11e-7■■■□□ 14.9
NCBP2P52298 DNM1L-218ENST00000548750 813 ntTSL 38.73□□□□□ -1.011e-7■■■□□ 14.9
NCBP2P52298 DNM1L-211ENST00000547312 2393 ntTSL 1 (best) BASIC8.44□□□□□ -1.061e-7■■■□□ 14.9
NCBP2P52298 DNM1L-224ENST00000550154 550 ntTSL 58.32□□□□□ -1.081e-7■■■□□ 14.9
Retrieved 100 of 18,329 protein–RNA pairs in 133.9 ms