RNA–Protein interactions for RNA: ENST00000494539.5

CLHC1-213, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 4

Gene CLHC1, Length 596 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-213ENST00000494539 AEBP2Q6ZN18 517 aaPredicted RBP19.81■□□□□ 0.76
CLHC1-213ENST00000494539 CHIC1Q5VXU3 224 aa18.63■□□□□ 0.57
CLHC1-213ENST00000494539 SENP3Q9H4L4 574 aaPredicted RBP17.03■□□□□ 0.32
CLHC1-213ENST00000494539 PHF23Q9BUL5 403 aaPredicted RBP16.75■□□□□ 0.27
CLHC1-213ENST00000494539 FOXD1Q16676 465 aa15.85■□□□□ 0.13
CLHC1-213ENST00000494539 POTEDQ86YR6 584 aa15.03■□□□□ -0
CLHC1-213ENST00000494539 MSH5O43196 834 aa15.01□□□□□ -0.01
CLHC1-213ENST00000494539 PLPPR3Q6T4P5 718 aa15.01□□□□□ -0.01
CLHC1-213ENST00000494539 PIAS4Q8N2W9 510 aaPredicted RBP14.82□□□□□ -0.04
CLHC1-213ENST00000494539 PPP6R1Q9UPN7 881 aa14.6□□□□□ -0.07
CLHC1-213ENST00000494539 ADRA2BP18089 450 aa14.58□□□□□ -0.08
CLHC1-213ENST00000494539 MAPK8IP2Q13387 824 aaPredicted RBP13.45□□□□□ -0.26
CLHC1-213ENST00000494539 DMRT2Q9Y5R5 561 aa13.43□□□□□ -0.26
CLHC1-213ENST00000494539 SCAF1Q9H7N4 1312 aaKnown RBP13.42□□□□□ -0.26
CLHC1-213ENST00000494539 PPP4R3CPQ6ZMV5 832 aa13.16□□□□□ -0.3
CLHC1-213ENST00000494539 CACNB1Q02641 598 aaPredicted RBP13.06□□□□□ -0.32
CLHC1-213ENST00000494539 DCAF8L1A6NGE4 600 aa13.01□□□□□ -0.33
CLHC1-213ENST00000494539 CNKSR2Q8WXI2 1034 aa12.86□□□□□ -0.35
CLHC1-213ENST00000494539 NCBP3Q53F19 620 aaKnown RBP12.85□□□□□ -0.35
CLHC1-213ENST00000494539 HOXD11P31277 338 aaPredicted RBP12.82□□□□□ -0.36
CLHC1-213ENST00000494539 RNF39Q9H2S5 420 aa12.73□□□□□ -0.37
CLHC1-213ENST00000494539 RNF216Q9NWF9 866 aaPredicted RBP12.69□□□□□ -0.38
CLHC1-213ENST00000494539 KCNA4P22459 653 aa12.66□□□□□ -0.38
CLHC1-213ENST00000494539 NPM3O75607 178 aaKnown RBP12.57□□□□□ -0.4
CLHC1-213ENST00000494539 C1QBPQ07021 282 aaKnown RBP12.57□□□□□ -0.4
CLHC1-213ENST00000494539 DNAJC5BQ9UF47 199 aa12.43□□□□□ -0.42
CLHC1-213ENST00000494539 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.32□□□□□ -0.44
CLHC1-213ENST00000494539 SLC4A1APQ9BWU0 796 aaKnown RBP12.08□□□□□ -0.48
CLHC1-213ENST00000494539 U3KPZ7 1027 aaPredicted RBP11.94□□□□□ -0.5
CLHC1-213ENST00000494539 CAPN15O75808 1086 aa11.93□□□□□ -0.5
CLHC1-213ENST00000494539 SLC4A2P04920 1241 aa11.89□□□□□ -0.51
CLHC1-213ENST00000494539 SPINK5Q9NQ38 1064 aaPredicted RBP11.85□□□□□ -0.51
CLHC1-213ENST00000494539 DSG3P32926 999 aa11.84□□□□□ -0.51
CLHC1-213ENST00000494539 POTEHQ6S545 545 aa11.76□□□□□ -0.53
CLHC1-213ENST00000494539 FOXD4L1Q9NU39 408 aa11.76□□□□□ -0.53
CLHC1-213ENST00000494539 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.7□□□□□ -0.54
CLHC1-213ENST00000494539 APLP2Q06481 763 aa11.7□□□□□ -0.54
CLHC1-213ENST00000494539 HNRNPUL2Q1KMD3 747 aaKnown RBP11.7□□□□□ -0.54
CLHC1-213ENST00000494539 MYCNP04198 464 aaPredicted RBP11.68□□□□□ -0.54
CLHC1-213ENST00000494539 TRHP20396 242 aaPredicted RBP11.66□□□□□ -0.54
CLHC1-213ENST00000494539 SAMD1Q6SPF0 538 aaPredicted RBP11.63□□□□□ -0.55
CLHC1-213ENST00000494539 ZNF219Q9P2Y4 722 aaPredicted RBP11.63□□□□□ -0.55
CLHC1-213ENST00000494539 ZBTB22O15209 634 aa11.61□□□□□ -0.55
CLHC1-213ENST00000494539 ABCB7O75027 752 aa11.59□□□□□ -0.55
CLHC1-213ENST00000494539 EHMT2Q96KQ7 1210 aa11.53□□□□□ -0.56
CLHC1-213ENST00000494539 CSRNP3Q8WYN3 585 aa11.45□□□□□ -0.58
CLHC1-213ENST00000494539 ATXN8OSP0DMR3 200 aa11.38□□□□□ -0.59
CLHC1-213ENST00000494539 RBM42Q9BTD8 480 aaKnown RBP11.38□□□□□ -0.59
CLHC1-213ENST00000494539 ATF5Q9Y2D1 282 aaPredicted RBP11.27□□□□□ -0.61
CLHC1-213ENST00000494539 POLA2Q14181 598 aa11.26□□□□□ -0.61
CLHC1-213ENST00000494539 CHRDL2Q6WN34 429 aa11.2□□□□□ -0.62
CLHC1-213ENST00000494539 ZBTB12Q9Y330 459 aaPredicted RBP11.07□□□□□ -0.64
CLHC1-213ENST00000494539 AKT1S1Q96B36 256 aa11.03□□□□□ -0.64
CLHC1-213ENST00000494539 FBLN2P98095 1184 aa10.94□□□□□ -0.66
CLHC1-213ENST00000494539 OSCARQ8IYS5 282 aa10.91□□□□□ -0.66
CLHC1-213ENST00000494539 REM2Q8IYK8 340 aaPredicted RBP10.9□□□□□ -0.66
CLHC1-213ENST00000494539 SP7Q8TDD2 431 aaPredicted RBP10.9□□□□□ -0.66
CLHC1-213ENST00000494539 PIP4P2Q8N4L2 257 aa10.85□□□□□ -0.67
CLHC1-213ENST00000494539 HAX1O00165 279 aa10.79□□□□□ -0.68
CLHC1-213ENST00000494539 PITPNM1O00562 1244 aa10.79□□□□□ -0.68
CLHC1-213ENST00000494539 MKRN4PQ13434 485 aaPredicted RBP10.79□□□□□ -0.68
CLHC1-213ENST00000494539 SPDYE2BA6NHP3 402 aa10.72□□□□□ -0.69
CLHC1-213ENST00000494539 SPDYE6P0CI01 402 aa10.72□□□□□ -0.69
CLHC1-213ENST00000494539 FXR2P51116 673 aaKnown RBP eCLIP10.72□□□□□ -0.69
CLHC1-213ENST00000494539 SPDYE2Q495Y8 402 aa10.72□□□□□ -0.69
CLHC1-213ENST00000494539 ZNF692Q9BU19 519 aaPredicted RBP10.62□□□□□ -0.71
CLHC1-213ENST00000494539 SSUH2Q9Y2M2 353 aa10.59□□□□□ -0.71
CLHC1-213ENST00000494539 CLEC11AQ9Y240 323 aa10.58□□□□□ -0.72
CLHC1-213ENST00000494539 SPDYE1Q8NFV5 336 aaPredicted RBP10.56□□□□□ -0.72
CLHC1-213ENST00000494539 SPDYE4A6NLX3 237 aa10.54□□□□□ -0.72
CLHC1-213ENST00000494539 PRKAR2AP13861 404 aaKnown RBP10.53□□□□□ -0.72
CLHC1-213ENST00000494539 EVX2Q03828 476 aa10.52□□□□□ -0.73
CLHC1-213ENST00000494539 PABPN1Q86U42 306 aaKnown RBP eCLIP10.47□□□□□ -0.73
CLHC1-213ENST00000494539 C19orf67A6NJJ6 358 aa10.4□□□□□ -0.74
CLHC1-213ENST00000494539 FKBP8Q14318 412 aa10.39□□□□□ -0.75
CLHC1-213ENST00000494539 PRR29P0C7W0 189 aa10.36□□□□□ -0.75
CLHC1-213ENST00000494539 CHADLQ6NUI6 762 aa10.34□□□□□ -0.75
CLHC1-213ENST00000494539 PROM2Q8N271 834 aa10.33□□□□□ -0.76
CLHC1-213ENST00000494539 STAG3Q9UJ98 1225 aa10.33□□□□□ -0.76
CLHC1-213ENST00000494539 GABBR2O75899 941 aa10.32□□□□□ -0.76
CLHC1-213ENST00000494539 LHX8Q68G74 356 aa10.23□□□□□ -0.77
CLHC1-213ENST00000494539 CD44P16070 742 aaKnown RBP10.2□□□□□ -0.78
CLHC1-213ENST00000494539 FARP1Q9Y4F1 1045 aaPredicted RBP10.17□□□□□ -0.78
CLHC1-213ENST00000494539 FBXO3Q9UK99 471 aa10.13□□□□□ -0.79
CLHC1-213ENST00000494539 CLCN6P51797 869 aa10.12□□□□□ -0.79
CLHC1-213ENST00000494539 DCBLD2Q96PD2 775 aa10.07□□□□□ -0.8
CLHC1-213ENST00000494539 PLEKHG5O94827 1062 aa10.06□□□□□ -0.8
CLHC1-213ENST00000494539 CREBZFQ9NS37 354 aa10.06□□□□□ -0.8
CLHC1-213ENST00000494539 POTEIP0CG38 1075 aa10.05□□□□□ -0.8
CLHC1-213ENST00000494539 ZRANB1Q9UGI0 708 aa10.02□□□□□ -0.81
CLHC1-213ENST00000494539 MIER1Q8N108 512 aa10.01□□□□□ -0.81
CLHC1-213ENST00000494539 PLCD3Q8N3E9 789 aa10□□□□□ -0.81
CLHC1-213ENST00000494539 ZNF579Q8NAF0 562 aaKnown RBP9.99□□□□□ -0.81
CLHC1-213ENST00000494539 NPM1P06748 294 aaKnown RBP eCLIP9.97□□□□□ -0.81
CLHC1-213ENST00000494539 ZBTB47Q9UFB7 747 aaPredicted RBP9.96□□□□□ -0.82
CLHC1-213ENST00000494539 VASPP50552 380 aaPredicted RBP9.95□□□□□ -0.82
CLHC1-213ENST00000494539 PAK3O75914 559 aaPredicted RBP9.94□□□□□ -0.82
CLHC1-213ENST00000494539 MNX1P50219 401 aaPredicted RBP9.92□□□□□ -0.82
CLHC1-213ENST00000494539 GALR2O43603 387 aaPredicted RBP9.89□□□□□ -0.83
CLHC1-213ENST00000494539 PLSCR2Q9NRY7 297 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms