RNA–Protein interactions for RNA: ENST00000515391.5

CDK7-213, Transcript of cyclin dependent kinase 7, humanhuman

TSL 2

Gene CDK7, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-213ENST00000515391 NISCHQ9Y2I1 1504 aa32.1■■■□□ 2.73
CDK7-213ENST00000515391 CCDC180Q9P1Z9 1646 aa28.58■■■□□ 2.17
CDK7-213ENST00000515391 ABCC9O60706 1549 aa28.33■■■□□ 2.13
CDK7-213ENST00000515391 DCAF8L2P0C7V8 631 aa27.06■■□□□ 1.92
CDK7-213ENST00000515391 RB1CC1Q8TDY2 1594 aa27.04■■□□□ 1.92
CDK7-213ENST00000515391 NACADO15069 1562 aa26.94■■□□□ 1.9
CDK7-213ENST00000515391 ZCCHC6Q5VYS8 1495 aaKnown RBP26.68■■□□□ 1.86
CDK7-213ENST00000515391 MYO15BQ96JP2 1530 aa26.65■■□□□ 1.86
CDK7-213ENST00000515391 UNC13AQ9UPW8 1703 aa26.49■■□□□ 1.83
CDK7-213ENST00000515391 PABPN1Q86U42 306 aaKnown RBP eCLIP26.48■■□□□ 1.83
CDK7-213ENST00000515391 DCAF1Q9Y4B6 1507 aa26.47■■□□□ 1.83
CDK7-213ENST00000515391 BICRAQ9NZM4 1560 aa26.29■■□□□ 1.8
CDK7-213ENST00000515391 DNAJC5BQ9UF47 199 aa26.28■■□□□ 1.8
CDK7-213ENST00000515391 SCRIBQ14160 1630 aa26.17■■□□□ 1.78
CDK7-213ENST00000515391 SHROOM4Q9ULL8 1493 aa25.84■■□□□ 1.73
CDK7-213ENST00000515391 EIF4G1Q04637 1599 aaKnown RBP25.6■■□□□ 1.69
CDK7-213ENST00000515391 CC2D2AQ9P2K1 1620 aa25.57■■□□□ 1.68
CDK7-213ENST00000515391 CECR2Q9BXF3 1484 aa25.43■■□□□ 1.66
CDK7-213ENST00000515391 SMARCA4P51532 1647 aa24.97■■□□□ 1.59
CDK7-213ENST00000515391 ATAD2BQ9ULI0 1458 aa24.89■■□□□ 1.58
CDK7-213ENST00000515391 NCAPD3P42695 1498 aa24.89■■□□□ 1.57
CDK7-213ENST00000515391 BAZ1AQ9NRL2 1556 aaPredicted RBP24.87■■□□□ 1.57
CDK7-213ENST00000515391 SMARCA2P51531 1590 aa24.8■■□□□ 1.56
CDK7-213ENST00000515391 MROH2BQ7Z745 1585 aa24.79■■□□□ 1.56
CDK7-213ENST00000515391 CHIC1Q5VXU3 224 aa24.75■■□□□ 1.55
CDK7-213ENST00000515391 HMGXB3Q12766 1538 aa24.71■■□□□ 1.55
CDK7-213ENST00000515391 BAZ1BQ9UIG0 1483 aaKnown RBP24.67■■□□□ 1.54
CDK7-213ENST00000515391 PEG3Q9GZU2 1588 aa24.67■■□□□ 1.54
CDK7-213ENST00000515391 AEBP2Q6ZN18 517 aaPredicted RBP24.56■■□□□ 1.52
CDK7-213ENST00000515391 WIZO95785 1651 aa24.52■■□□□ 1.52
CDK7-213ENST00000515391 NESP48681 1621 aa24.46■■□□□ 1.51
CDK7-213ENST00000515391 RSF1Q96T23 1441 aaPredicted RBP24.4■■□□□ 1.5
CDK7-213ENST00000515391 ERCC6Q03468 1493 aa24.38■■□□□ 1.49
CDK7-213ENST00000515391 LAMC3Q9Y6N6 1575 aa24.25■■□□□ 1.47
CDK7-213ENST00000515391 TOP2AP11388 1531 aaKnown RBP24.18■■□□□ 1.46
CDK7-213ENST00000515391 CADPSQ9ULU8 1353 aa24.17■■□□□ 1.46
CDK7-213ENST00000515391 CUX2O14529 1486 aa24.15■■□□□ 1.46
CDK7-213ENST00000515391 KIF21AQ7Z4S6 1674 aa24.12■■□□□ 1.45
CDK7-213ENST00000515391 PDS5BQ9NTI5 1447 aa24.1■■□□□ 1.45
CDK7-213ENST00000515391 THOC2Q8NI27 1593 aaKnown RBP24.07■■□□□ 1.44
CDK7-213ENST00000515391 CFTRP13569 1480 aa23.96■■□□□ 1.43
CDK7-213ENST00000515391 CCDC88BA6NC98 1476 aa23.94■■□□□ 1.42
CDK7-213ENST00000515391 FANCD2Q9BXW9 1451 aa23.9■■□□□ 1.42
CDK7-213ENST00000515391 MRC2Q9UBG0 1479 aa23.9■■□□□ 1.42
CDK7-213ENST00000515391 CEP164Q9UPV0 1460 aa23.88■■□□□ 1.41
CDK7-213ENST00000515391 WDR62O43379 1518 aa23.81■■□□□ 1.4
CDK7-213ENST00000515391 DNAJC5Q9H3Z4 198 aa23.76■■□□□ 1.39
CDK7-213ENST00000515391 PRDM2Q13029 1718 aa23.73■■□□□ 1.39
CDK7-213ENST00000515391 SUPT5HO00267 1087 aaKnown RBP23.71■■□□□ 1.39
CDK7-213ENST00000515391 URB2Q14146 1524 aaKnown RBP23.7■■□□□ 1.38
CDK7-213ENST00000515391 TOPBP1Q92547 1522 aa23.5■■□□□ 1.35
CDK7-213ENST00000515391 DNMBPQ6XZF7 1577 aa23.43■■□□□ 1.34
CDK7-213ENST00000515391 ABCC8Q09428 1581 aa23.4■■□□□ 1.34
CDK7-213ENST00000515391 IFT140Q96RY7 1462 aa23.37■■□□□ 1.33
CDK7-213ENST00000515391 ZNF608Q9ULD9 1512 aaPredicted RBP23.37■■□□□ 1.33
CDK7-213ENST00000515391 POLA1P09884 1462 aaPredicted RBP23.29■■□□□ 1.32
CDK7-213ENST00000515391 CUX1P39880 1505 aa23.25■■□□□ 1.31
CDK7-213ENST00000515391 TARBP1Q13395 1621 aaKnown RBP23.25■■□□□ 1.31
CDK7-213ENST00000515391 RAD54L2Q9Y4B4 1467 aa23.24■■□□□ 1.31
CDK7-213ENST00000515391 EIF4G3O43432 1585 aaKnown RBP23.22■■□□□ 1.31
CDK7-213ENST00000515391 AQRO60306 1485 aaKnown RBP eCLIP23.21■■□□□ 1.312e-6■■■■□ 22
CDK7-213ENST00000515391 FGD5Q6ZNL6 1462 aa23.21■■□□□ 1.31
CDK7-213ENST00000515391 SOGA1O94964 1423 aa23.2■■□□□ 1.3
CDK7-213ENST00000515391 OSCARQ8IYS5 282 aa23.18■■□□□ 1.3
CDK7-213ENST00000515391 TDRD9Q8NDG6 1382 aaKnown RBP23.14■■□□□ 1.29
CDK7-213ENST00000515391 FBLN2P98095 1184 aa23■■□□□ 1.27
CDK7-213ENST00000515391 WRNQ14191 1432 aaPredicted RBP eCLIP22.99■■□□□ 1.27
CDK7-213ENST00000515391 WDR97A6NE52 1622 aa22.99■■□□□ 1.27
CDK7-213ENST00000515391 CHD1O14646 1710 aa22.99■■□□□ 1.27
CDK7-213ENST00000515391 SYNJ1O43426 1573 aa22.98■■□□□ 1.27
CDK7-213ENST00000515391 TRIM41Q8WV44 630 aa22.96■■□□□ 1.27
CDK7-213ENST00000515391 SNAPC4Q5SXM2 1469 aa22.96■■□□□ 1.27
CDK7-213ENST00000515391 TOP2BQ02880 1626 aa22.95■■□□□ 1.26
CDK7-213ENST00000515391 BIVM-ERCC5R4GMW8 1640 aa22.95■■□□□ 1.26
CDK7-213ENST00000515391 ABCA10Q8WWZ4 1543 aa22.92■■□□□ 1.26
CDK7-213ENST00000515391 GRIN2BQ13224 1484 aa22.92■■□□□ 1.26
CDK7-213ENST00000515391 GAPVD1Q14C86 1478 aa22.91■■□□□ 1.26
CDK7-213ENST00000515391 PBRM1Q86U86 1689 aa22.87■■□□□ 1.25
CDK7-213ENST00000515391 ABCA5Q8WWZ7 1642 aa22.86■■□□□ 1.25
CDK7-213ENST00000515391 CHMP7Q8WUX9 453 aaPredicted RBP22.86■■□□□ 1.25
CDK7-213ENST00000515391 MAGI1Q96QZ7 1491 aaPredicted RBP22.85■■□□□ 1.25
CDK7-213ENST00000515391 RIMBP3CA6NJZ7 1639 aa22.84■■□□□ 1.25
CDK7-213ENST00000515391 RIMBP3BA6NNM3 1639 aa22.84■■□□□ 1.25
CDK7-213ENST00000515391 RIMBP3Q9UFD9 1639 aa22.84■■□□□ 1.25
CDK7-213ENST00000515391 SYNJ2O15056 1496 aa22.79■■□□□ 1.24
CDK7-213ENST00000515391 ARHGEF11O15085 1522 aa22.79■■□□□ 1.24
CDK7-213ENST00000515391 CLASP1Q7Z460 1538 aa22.7■■□□□ 1.22
CDK7-213ENST00000515391 ADAMTS12P58397 1594 aa22.67■■□□□ 1.22
CDK7-213ENST00000515391 CYB5RLQ6IPT4 315 aa22.66■■□□□ 1.22
CDK7-213ENST00000515391 GRIN2AQ12879 1464 aa22.64■■□□□ 1.21
CDK7-213ENST00000515391 ERICH3Q5RHP9 1530 aa22.63■■□□□ 1.21
CDK7-213ENST00000515391 FHAD1B1AJZ9 1412 aa22.62■■□□□ 1.21
CDK7-213ENST00000515391 ARAP1Q96P48 1450 aa22.61■■□□□ 1.21
CDK7-213ENST00000515391 CEP170Q5SW79 1584 aa22.55■■□□□ 1.2
CDK7-213ENST00000515391 NUP160Q12769 1436 aa22.54■■□□□ 1.2
CDK7-213ENST00000515391 KIF27Q86VH2 1401 aa22.52■■□□□ 1.2
CDK7-213ENST00000515391 IGF1RP08069 1367 aa22.49■■□□□ 1.19
CDK7-213ENST00000515391 ERCC6L2Q5T890 1561 aa22.46■■□□□ 1.19
CDK7-213ENST00000515391 SHROOM2Q13796 1616 aa22.38■■□□□ 1.17
CDK7-213ENST00000515391 CUL7Q14999 1698 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms