RNA–Protein interactions for RNA: ENST00000559448.5

NIPA1-204, Transcript of NIPA magnesium transporter 1, humanhuman

TSL 2

Gene NIPA1, Length 2,799 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPA1-204ENST00000559448 NISCHQ9Y2I1 1504 aa20.61■□□□□ 0.89
NIPA1-204ENST00000559448 SHROOM4Q9ULL8 1493 aa18.18■□□□□ 0.5
NIPA1-204ENST00000559448 SUPT5HO00267 1087 aaKnown RBP17.98■□□□□ 0.47
NIPA1-204ENST00000559448 HRCP23327 699 aa17.68■□□□□ 0.42
NIPA1-204ENST00000559448 MYO15BQ96JP2 1530 aa17.67■□□□□ 0.42
NIPA1-204ENST00000559448 CHIC1Q5VXU3 224 aa17.56■□□□□ 0.4
NIPA1-204ENST00000559448 PCGF6Q9BYE7 350 aa17.51■□□□□ 0.39
NIPA1-204ENST00000559448 ZCCHC6Q5VYS8 1495 aaKnown RBP17.49■□□□□ 0.39
NIPA1-204ENST00000559448 PPARGC1BQ86YN6 1023 aaKnown RBP17.45■□□□□ 0.38
NIPA1-204ENST00000559448 DCAF8L2P0C7V8 631 aa17.29■□□□□ 0.36
NIPA1-204ENST00000559448 LOC105371045A0A1W2PR82 267 aa17.19■□□□□ 0.34
NIPA1-204ENST00000559448 CCDC180Q9P1Z9 1646 aa17.19■□□□□ 0.34
NIPA1-204ENST00000559448 DCAF1Q9Y4B6 1507 aa17.1■□□□□ 0.33
NIPA1-204ENST00000559448 TRIM26Q12899 539 aaPredicted RBP16.94■□□□□ 0.3
NIPA1-204ENST00000559448 FAM9AQ8IZU1 332 aaPredicted RBP16.66■□□□□ 0.26
NIPA1-204ENST00000559448 ZEB1P37275 1124 aaPredicted RBP16.64■□□□□ 0.25
NIPA1-204ENST00000559448 EHMT2Q96KQ7 1210 aa16.64■□□□□ 0.25
NIPA1-204ENST00000559448 SCAF1Q9H7N4 1312 aaKnown RBP16.63■□□□□ 0.25
NIPA1-204ENST00000559448 TRIM41Q8WV44 630 aa16.6■□□□□ 0.25
NIPA1-204ENST00000559448 ABCC9O60706 1549 aa16.59■□□□□ 0.25
NIPA1-204ENST00000559448 RSF1Q96T23 1441 aaPredicted RBP16.53■□□□□ 0.24
NIPA1-204ENST00000559448 PELP1Q8IZL8 1130 aaKnown RBP16.51■□□□□ 0.23
NIPA1-204ENST00000559448 RB1CC1Q8TDY2 1594 aa16.46■□□□□ 0.23
NIPA1-204ENST00000559448 SCRIBQ14160 1630 aa16.44■□□□□ 0.22
NIPA1-204ENST00000559448 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.34■□□□□ 0.21
NIPA1-204ENST00000559448 NEUROD1Q13562 356 aa16.27■□□□□ 0.2
NIPA1-204ENST00000559448 ACIN1Q9UKV3 1341 aaKnown RBP16.26■□□□□ 0.19
NIPA1-204ENST00000559448 CCER1Q8TC90 406 aaPredicted RBP16.25■□□□□ 0.19
NIPA1-204ENST00000559448 CECR2Q9BXF3 1484 aa16.2■□□□□ 0.18
NIPA1-204ENST00000559448 TTBK1Q5TCY1 1321 aaPredicted RBP16.19■□□□□ 0.18
NIPA1-204ENST00000559448 GTF3C3Q9Y5Q9 886 aa16.15■□□□□ 0.18
NIPA1-204ENST00000559448 MROH2BQ7Z745 1585 aa16.13■□□□□ 0.17
NIPA1-204ENST00000559448 DIEXFQ68CQ4 756 aaKnown RBP16.13■□□□□ 0.17
NIPA1-204ENST00000559448 WIZO95785 1651 aa16.08■□□□□ 0.16
NIPA1-204ENST00000559448 CENPBP07199 599 aaPredicted RBP16.03■□□□□ 0.16
NIPA1-204ENST00000559448 EIF4G1Q04637 1599 aaKnown RBP15.94■□□□□ 0.14
NIPA1-204ENST00000559448 YTHDC1Q96MU7 727 aaKnown RBP15.92■□□□□ 0.14
NIPA1-204ENST00000559448 ABCC8Q09428 1581 aa15.92■□□□□ 0.14
NIPA1-204ENST00000559448 CCDC88BA6NC98 1476 aa15.9■□□□□ 0.14
NIPA1-204ENST00000559448 CEP162Q5TB80 1403 aa15.9■□□□□ 0.14
NIPA1-204ENST00000559448 BAZ1AQ9NRL2 1556 aaPredicted RBP15.89■□□□□ 0.13
NIPA1-204ENST00000559448 WRNQ14191 1432 aaPredicted RBP eCLIP15.88■□□□□ 0.131e-6■■■■■ 58.5
NIPA1-204ENST00000559448 NACADO15069 1562 aa15.88■□□□□ 0.13
NIPA1-204ENST00000559448 ZNF316A6NFI3 1004 aaPredicted RBP15.87■□□□□ 0.13
NIPA1-204ENST00000559448 SOGA1O94964 1423 aa15.85■□□□□ 0.13
NIPA1-204ENST00000559448 UBTFP17480 764 aaKnown RBP15.79■□□□□ 0.12
NIPA1-204ENST00000559448 MIER1Q8N108 512 aa15.79■□□□□ 0.12
NIPA1-204ENST00000559448 RUSC2Q8N2Y8 1516 aa15.78■□□□□ 0.12
NIPA1-204ENST00000559448 TNIKQ9UKE5 1360 aa15.78■□□□□ 0.12
NIPA1-204ENST00000559448 HNRNPUL2Q1KMD3 747 aaKnown RBP15.75■□□□□ 0.11
NIPA1-204ENST00000559448 CSRNP3Q8WYN3 585 aa15.73■□□□□ 0.11
NIPA1-204ENST00000559448 MYT1Q01538 1121 aa15.72■□□□□ 0.11
NIPA1-204ENST00000559448 TOP2AP11388 1531 aaKnown RBP15.72■□□□□ 0.11
NIPA1-204ENST00000559448 SMARCA2P51531 1590 aa15.69■□□□□ 0.1
NIPA1-204ENST00000559448 GOLGA3Q08378 1498 aa15.62■□□□□ 0.09
NIPA1-204ENST00000559448 SMARCA4P51532 1647 aa15.62■□□□□ 0.09
NIPA1-204ENST00000559448 EEA1Q15075 1411 aa15.6■□□□□ 0.09
NIPA1-204ENST00000559448 RANGAP1P46060 587 aaPredicted RBP15.56■□□□□ 0.08
NIPA1-204ENST00000559448 CLIP1P30622 1438 aa15.51■□□□□ 0.07
NIPA1-204ENST00000559448 UNC13AQ9UPW8 1703 aa15.51■□□□□ 0.07
NIPA1-204ENST00000559448 CEP164Q9UPV0 1460 aa15.47■□□□□ 0.07
NIPA1-204ENST00000559448 VPS8Q8N3P4 1428 aa15.45■□□□□ 0.06
NIPA1-204ENST00000559448 APLP2Q06481 763 aa15.45■□□□□ 0.06
NIPA1-204ENST00000559448 SYNJ1O43426 1573 aa15.44■□□□□ 0.06
NIPA1-204ENST00000559448 KIF21BO75037 1637 aa15.41■□□□□ 0.06
NIPA1-204ENST00000559448 SUPT16HQ9Y5B9 1047 aaKnown RBP15.41■□□□□ 0.06
NIPA1-204ENST00000559448 RAPGEF2Q9Y4G8 1499 aa15.41■□□□□ 0.06
NIPA1-204ENST00000559448 PABPN1Q86U42 306 aaKnown RBP eCLIP15.39■□□□□ 0.05
NIPA1-204ENST00000559448 DHX57Q6P158 1386 aaKnown RBP15.37■□□□□ 0.05
NIPA1-204ENST00000559448 BICRAQ9NZM4 1560 aa15.36■□□□□ 0.05
NIPA1-204ENST00000559448 BAZ1BQ9UIG0 1483 aaKnown RBP15.31■□□□□ 0.04
NIPA1-204ENST00000559448 KANK4Q5T7N3 995 aaPredicted RBP15.3■□□□□ 0.04
NIPA1-204ENST00000559448 TSHZ2Q9NRE2 1034 aa15.29■□□□□ 0.04
NIPA1-204ENST00000559448 KCNH8Q96L42 1107 aa15.28■□□□□ 0.04
NIPA1-204ENST00000559448 CLSPNQ9HAW4 1339 aa15.25■□□□□ 0.03
NIPA1-204ENST00000559448 ARAP1Q96P48 1450 aa15.22■□□□□ 0.03
NIPA1-204ENST00000559448 ITGAEP38570 1179 aa15.22■□□□□ 0.03
NIPA1-204ENST00000559448 BCANQ96GW7 911 aa15.21■□□□□ 0.03
NIPA1-204ENST00000559448 PEG3Q9GZU2 1588 aa15.19■□□□□ 0.02
NIPA1-204ENST00000559448 ATAD2BQ9ULI0 1458 aa15.15■□□□□ 0.02
NIPA1-204ENST00000559448 ANP32EQ9BTT0 268 aa15.14■□□□□ 0.01
NIPA1-204ENST00000559448 RRBP1Q9P2E9 1410 aaKnown RBP15.13■□□□□ 0.01
NIPA1-204ENST00000559448 TOP2BQ02880 1626 aa15.12■□□□□ 0.01
NIPA1-204ENST00000559448 PRXQ9BXM0 1461 aa15.11■□□□□ 0.01
NIPA1-204ENST00000559448 CCNB3Q8WWL7 1395 aa15.1■□□□□ 0.01
NIPA1-204ENST00000559448 DNAJC5BQ9UF47 199 aa15.09■□□□□ 0.01
NIPA1-204ENST00000559448 FKBP8Q14318 412 aa15.08■□□□□ 0.01
NIPA1-204ENST00000559448 ERICH3Q5RHP9 1530 aa15.08■□□□□ 0
NIPA1-204ENST00000559448 DDX10Q13206 875 aaKnown RBP15.07■□□□□ 0
NIPA1-204ENST00000559448 CUX2O14529 1486 aa15.06■□□□□ 0
NIPA1-204ENST00000559448 RAB3GAP2Q9H2M9 1393 aa15.06■□□□□ 0
NIPA1-204ENST00000559448 MAPKBP1O60336 1514 aa15.05■□□□□ -0
NIPA1-204ENST00000559448 SIN3AQ96ST3 1273 aa15.03■□□□□ -0
NIPA1-204ENST00000559448 BIVM-ERCC5R4GMW8 1640 aa15.03■□□□□ -0
NIPA1-204ENST00000559448 HIRIP3Q9BW71 556 aaPredicted RBP15.03■□□□□ -0
NIPA1-204ENST00000559448 ARHGAP35Q9NRY4 1499 aa15.02□□□□□ -0.01
NIPA1-204ENST00000559448 WDR97A6NE52 1622 aa14.99□□□□□ -0.01
NIPA1-204ENST00000559448 TRIM52Q96A61 297 aa14.97□□□□□ -0.01
NIPA1-204ENST00000559448 CUX1P39880 1505 aa14.97□□□□□ -0.01
NIPA1-204ENST00000559448 KIF27Q86VH2 1401 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms