RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 AEBP2Q6ZN18 517 aaPredicted RBP12.43□□□□□ -0.42
CLHC1-201ENST00000401408 POTEDQ86YR6 584 aa11.72□□□□□ -0.53
CLHC1-201ENST00000401408 CHIC1Q5VXU3 224 aa11.54□□□□□ -0.56
CLHC1-201ENST00000401408 SENP3Q9H4L4 574 aaPredicted RBP10.73□□□□□ -0.69
CLHC1-201ENST00000401408 PHF23Q9BUL5 403 aaPredicted RBP10.46□□□□□ -0.74
CLHC1-201ENST00000401408 FOXD1Q16676 465 aa10.19□□□□□ -0.78
CLHC1-201ENST00000401408 MSH5O43196 834 aa9.94□□□□□ -0.82
CLHC1-201ENST00000401408 CACNB1Q02641 598 aaPredicted RBP9.27□□□□□ -0.93
CLHC1-201ENST00000401408 PIAS4Q8N2W9 510 aaPredicted RBP9.23□□□□□ -0.93
CLHC1-201ENST00000401408 POTEHQ6S545 545 aa8.95□□□□□ -0.98
CLHC1-201ENST00000401408 PPP6R1Q9UPN7 881 aa8.65□□□□□ -1.02
CLHC1-201ENST00000401408 ADRA2BP18089 450 aa8.55□□□□□ -1.04
CLHC1-201ENST00000401408 RNF39Q9H2S5 420 aa8.39□□□□□ -1.07
CLHC1-201ENST00000401408 DMRT2Q9Y5R5 561 aa8.34□□□□□ -1.07
CLHC1-201ENST00000401408 SLC24A1O60721 1099 aa8.23□□□□□ -1.09
CLHC1-201ENST00000401408 MAPK8IP2Q13387 824 aaPredicted RBP8.22□□□□□ -1.09
CLHC1-201ENST00000401408 C1QBPQ07021 282 aaKnown RBP8.18□□□□□ -1.1
CLHC1-201ENST00000401408 DCAF8L1A6NGE4 600 aa8.09□□□□□ -1.12
CLHC1-201ENST00000401408 NISCHQ9Y2I1 1504 aa8.03□□□□□ -1.12
CLHC1-201ENST00000401408 PLPPR3Q6T4P5 718 aa7.96□□□□□ -1.14
CLHC1-201ENST00000401408 PLSCR2Q9NRY7 297 aa7.89□□□□□ -1.15
CLHC1-201ENST00000401408 SP7Q8TDD2 431 aaPredicted RBP7.83□□□□□ -1.16
CLHC1-201ENST00000401408 SCAF1Q9H7N4 1312 aaKnown RBP7.76□□□□□ -1.17
CLHC1-201ENST00000401408 EHMT2Q96KQ7 1210 aa7.71□□□□□ -1.18
CLHC1-201ENST00000401408 ABCC9O60706 1549 aa7.65□□□□□ -1.19
CLHC1-201ENST00000401408 HOXD11P31277 338 aaPredicted RBP7.58□□□□□ -1.2
CLHC1-201ENST00000401408 DNAJC5BQ9UF47 199 aa7.58□□□□□ -1.2
CLHC1-201ENST00000401408 DSG3P32926 999 aa7.48□□□□□ -1.21
CLHC1-201ENST00000401408 CHRDL2Q6WN34 429 aa7.47□□□□□ -1.21
CLHC1-201ENST00000401408 DAXXQ9UER7 740 aaPredicted RBP7.44□□□□□ -1.22
CLHC1-201ENST00000401408 CCDC180Q9P1Z9 1646 aa7.41□□□□□ -1.22
CLHC1-201ENST00000401408 RTN4Q9NQC3 1192 aaKnown RBP7.41□□□□□ -1.22
CLHC1-201ENST00000401408 NCBP3Q53F19 620 aaKnown RBP7.35□□□□□ -1.23
CLHC1-201ENST00000401408 LHX8Q68G74 356 aa7.34□□□□□ -1.23
CLHC1-201ENST00000401408 AMER1Q5JTC6 1135 aaPredicted RBP7.31□□□□□ -1.24
CLHC1-201ENST00000401408 CAPN15O75808 1086 aa7.24□□□□□ -1.25
CLHC1-201ENST00000401408 HAX1O00165 279 aa7.23□□□□□ -1.25
CLHC1-201ENST00000401408 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.22□□□□□ -1.25
CLHC1-201ENST00000401408 SPINK5Q9NQ38 1064 aaPredicted RBP7.22□□□□□ -1.25
CLHC1-201ENST00000401408 DNAJC5Q9H3Z4 198 aa7.21□□□□□ -1.25
CLHC1-201ENST00000401408 RNF216Q9NWF9 866 aaPredicted RBP7.2□□□□□ -1.26
CLHC1-201ENST00000401408 KCNA4P22459 653 aa7.17□□□□□ -1.26
CLHC1-201ENST00000401408 RB1CC1Q8TDY2 1594 aa7.17□□□□□ -1.26
CLHC1-201ENST00000401408 CSRNP3Q8WYN3 585 aa7.15□□□□□ -1.26
CLHC1-201ENST00000401408 RBM42Q9BTD8 480 aaKnown RBP7.12□□□□□ -1.27
CLHC1-201ENST00000401408 TTBK1Q5TCY1 1321 aaPredicted RBP7.11□□□□□ -1.27
CLHC1-201ENST00000401408 UNC13AQ9UPW8 1703 aa7.09□□□□□ -1.27
CLHC1-201ENST00000401408 EVX2Q03828 476 aa7.09□□□□□ -1.27
CLHC1-201ENST00000401408 PRKCSHP14314 528 aaPredicted RBP7.07□□□□□ -1.28
CLHC1-201ENST00000401408 NACADO15069 1562 aa7.06□□□□□ -1.28
CLHC1-201ENST00000401408 BICRAQ9NZM4 1560 aa7.06□□□□□ -1.28
CLHC1-201ENST00000401408 ARXQ96QS3 562 aa7.05□□□□□ -1.28
CLHC1-201ENST00000401408 MYT1Q01538 1121 aa7.05□□□□□ -1.28
CLHC1-201ENST00000401408 PIP4P2Q8N4L2 257 aa7.05□□□□□ -1.28
CLHC1-201ENST00000401408 PELP1Q8IZL8 1130 aaKnown RBP7.03□□□□□ -1.28
CLHC1-201ENST00000401408 PABPN1Q86U42 306 aaKnown RBP eCLIP7.02□□□□□ -1.29
CLHC1-201ENST00000401408 ABCB7O75027 752 aa7□□□□□ -1.29
CLHC1-201ENST00000401408 POTEMA6NI47 508 aa6.99□□□□□ -1.29
CLHC1-201ENST00000401408 APLP2Q06481 763 aa6.99□□□□□ -1.29
CLHC1-201ENST00000401408 CNKSR2Q8WXI2 1034 aa6.97□□□□□ -1.29
CLHC1-201ENST00000401408 ERICH6Q7L0X2 663 aa6.96□□□□□ -1.3
CLHC1-201ENST00000401408 U3KPZ7 1027 aaPredicted RBP6.96□□□□□ -1.3
CLHC1-201ENST00000401408 CC2D2AQ9P2K1 1620 aa6.95□□□□□ -1.3
CLHC1-201ENST00000401408 CECR2Q9BXF3 1484 aa6.95□□□□□ -1.3
CLHC1-201ENST00000401408 TIMELESSQ9UNS1 1208 aa6.94□□□□□ -1.3
CLHC1-201ENST00000401408 POTEGQ6S5H5 508 aa6.92□□□□□ -1.3
CLHC1-201ENST00000401408 SHROOM4Q9ULL8 1493 aa6.91□□□□□ -1.3
CLHC1-201ENST00000401408 MYO15BQ96JP2 1530 aa6.91□□□□□ -1.3
CLHC1-201ENST00000401408 RANGAP1P46060 587 aaPredicted RBP6.89□□□□□ -1.31
CLHC1-201ENST00000401408 TAOK2Q9UL54 1235 aa6.89□□□□□ -1.31
CLHC1-201ENST00000401408 PCDH10Q9P2E7 1040 aa6.88□□□□□ -1.31
CLHC1-201ENST00000401408 TULP1O00294 542 aaPredicted RBP6.86□□□□□ -1.31
CLHC1-201ENST00000401408 EIF4G1Q04637 1599 aaKnown RBP6.86□□□□□ -1.31
CLHC1-201ENST00000401408 TRHP20396 242 aaPredicted RBP6.85□□□□□ -1.31
CLHC1-201ENST00000401408 PPP4R3CPQ6ZMV5 832 aa6.85□□□□□ -1.31
CLHC1-201ENST00000401408 BCANQ96GW7 911 aa6.85□□□□□ -1.31
CLHC1-201ENST00000401408 HOMEZQ8IX15 550 aa6.84□□□□□ -1.31
CLHC1-201ENST00000401408 GABBR2O75899 941 aa6.84□□□□□ -1.32
CLHC1-201ENST00000401408 SLC4A1APQ9BWU0 796 aaKnown RBP6.84□□□□□ -1.32
CLHC1-201ENST00000401408 CUX2O14529 1486 aa6.81□□□□□ -1.32
CLHC1-201ENST00000401408 FXR2P51116 673 aaKnown RBP eCLIP6.8□□□□□ -1.32
CLHC1-201ENST00000401408 TPRNQ4KMQ1 711 aa6.78□□□□□ -1.32
CLHC1-201ENST00000401408 ZNF219Q9P2Y4 722 aaPredicted RBP6.76□□□□□ -1.33
CLHC1-201ENST00000401408 AKT1S1Q96B36 256 aa6.72□□□□□ -1.33
CLHC1-201ENST00000401408 PLCB2Q00722 1185 aa6.7□□□□□ -1.34
CLHC1-201ENST00000401408 DCAF8L2P0C7V8 631 aa6.7□□□□□ -1.34
CLHC1-201ENST00000401408 POTEIP0CG38 1075 aa6.7□□□□□ -1.34
CLHC1-201ENST00000401408 REM2Q8IYK8 340 aaPredicted RBP6.69□□□□□ -1.34
CLHC1-201ENST00000401408 DCAF1Q9Y4B6 1507 aa6.67□□□□□ -1.34
CLHC1-201ENST00000401408 PODXL2Q9NZ53 605 aa6.67□□□□□ -1.34
CLHC1-201ENST00000401408 GTF3C3Q9Y5Q9 886 aa6.67□□□□□ -1.34
CLHC1-201ENST00000401408 HAP1P54257 671 aaPredicted RBP6.66□□□□□ -1.34
CLHC1-201ENST00000401408 OTUD5Q96G74 571 aa6.66□□□□□ -1.34
CLHC1-201ENST00000401408 PITPNM1O00562 1244 aa6.64□□□□□ -1.35
CLHC1-201ENST00000401408 KLHL34Q8N239 644 aa6.64□□□□□ -1.35
CLHC1-201ENST00000401408 C19orf67A6NJJ6 358 aa6.63□□□□□ -1.35
CLHC1-201ENST00000401408 SCRIBQ14160 1630 aa6.62□□□□□ -1.35
CLHC1-201ENST00000401408 EIF5BO60841 1220 aaKnown RBP6.59□□□□□ -1.35
CLHC1-201ENST00000401408 TRIM41Q8WV44 630 aa6.59□□□□□ -1.35
CLHC1-201ENST00000401408 ZCCHC6Q5VYS8 1495 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms