RNA–Protein interactions for RNA: ENST00000487320.5

CLHC1-212, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 4

Gene CLHC1, Length 594 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-212ENST00000487320 AEBP2Q6ZN18 517 aaPredicted RBP20.08■□□□□ 0.81
CLHC1-212ENST00000487320 CHIC1Q5VXU3 224 aa19.04■□□□□ 0.64
CLHC1-212ENST00000487320 SENP3Q9H4L4 574 aaPredicted RBP17.18■□□□□ 0.34
CLHC1-212ENST00000487320 PHF23Q9BUL5 403 aaPredicted RBP16.91■□□□□ 0.3
CLHC1-212ENST00000487320 FOXD1Q16676 465 aa15.98■□□□□ 0.15
CLHC1-212ENST00000487320 PLPPR3Q6T4P5 718 aa15.19■□□□□ 0.02
CLHC1-212ENST00000487320 MSH5O43196 834 aa15.02■□□□□ -0
CLHC1-212ENST00000487320 PIAS4Q8N2W9 510 aaPredicted RBP14.9□□□□□ -0.02
CLHC1-212ENST00000487320 PPP6R1Q9UPN7 881 aa14.88□□□□□ -0.03
CLHC1-212ENST00000487320 ADRA2BP18089 450 aa14.81□□□□□ -0.04
CLHC1-212ENST00000487320 POTEDQ86YR6 584 aa14.71□□□□□ -0.05
CLHC1-212ENST00000487320 SCAF1Q9H7N4 1312 aaKnown RBP13.63□□□□□ -0.23
CLHC1-212ENST00000487320 MAPK8IP2Q13387 824 aaPredicted RBP13.61□□□□□ -0.23
CLHC1-212ENST00000487320 DMRT2Q9Y5R5 561 aa13.61□□□□□ -0.23
CLHC1-212ENST00000487320 PPP4R3CPQ6ZMV5 832 aa13.29□□□□□ -0.28
CLHC1-212ENST00000487320 HOXD11P31277 338 aaPredicted RBP13.11□□□□□ -0.31
CLHC1-212ENST00000487320 CNKSR2Q8WXI2 1034 aa13.08□□□□□ -0.32
CLHC1-212ENST00000487320 KCNA4P22459 653 aa13.03□□□□□ -0.32
CLHC1-212ENST00000487320 RNF216Q9NWF9 866 aaPredicted RBP12.99□□□□□ -0.33
CLHC1-212ENST00000487320 DCAF8L1A6NGE4 600 aa12.95□□□□□ -0.34
CLHC1-212ENST00000487320 EHMT2Q96KQ7 1210 aa12.88□□□□□ -0.35
CLHC1-212ENST00000487320 CACNB1Q02641 598 aaPredicted RBP12.86□□□□□ -0.35
CLHC1-212ENST00000487320 RNF39Q9H2S5 420 aa12.8□□□□□ -0.36
CLHC1-212ENST00000487320 NCBP3Q53F19 620 aaKnown RBP12.78□□□□□ -0.36
CLHC1-212ENST00000487320 DNAJC5BQ9UF47 199 aa12.74□□□□□ -0.37
CLHC1-212ENST00000487320 C1QBPQ07021 282 aaKnown RBP12.63□□□□□ -0.39
CLHC1-212ENST00000487320 NPM3O75607 178 aaKnown RBP12.57□□□□□ -0.4
CLHC1-212ENST00000487320 CSRNP3Q8WYN3 585 aa12.49□□□□□ -0.41
CLHC1-212ENST00000487320 SLC4A1APQ9BWU0 796 aaKnown RBP12.49□□□□□ -0.41
CLHC1-212ENST00000487320 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.42□□□□□ -0.42
CLHC1-212ENST00000487320 U3KPZ7 1027 aaPredicted RBP12.18□□□□□ -0.46
CLHC1-212ENST00000487320 ZBTB22O15209 634 aa12.05□□□□□ -0.48
CLHC1-212ENST00000487320 SLC4A2P04920 1241 aa12.03□□□□□ -0.48
CLHC1-212ENST00000487320 SPINK5Q9NQ38 1064 aaPredicted RBP11.99□□□□□ -0.49
CLHC1-212ENST00000487320 CAPN15O75808 1086 aa11.96□□□□□ -0.49
CLHC1-212ENST00000487320 DSG3P32926 999 aa11.95□□□□□ -0.5
CLHC1-212ENST00000487320 APLP2Q06481 763 aa11.88□□□□□ -0.51
CLHC1-212ENST00000487320 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.85□□□□□ -0.51
CLHC1-212ENST00000487320 HNRNPUL2Q1KMD3 747 aaKnown RBP11.85□□□□□ -0.51
CLHC1-212ENST00000487320 ZNF219Q9P2Y4 722 aaPredicted RBP11.79□□□□□ -0.52
CLHC1-212ENST00000487320 FOXD4L1Q9NU39 408 aa11.78□□□□□ -0.52
CLHC1-212ENST00000487320 SAMD1Q6SPF0 538 aaPredicted RBP11.77□□□□□ -0.53
CLHC1-212ENST00000487320 TRHP20396 242 aaPredicted RBP11.74□□□□□ -0.53
CLHC1-212ENST00000487320 ABCB7O75027 752 aa11.66□□□□□ -0.54
CLHC1-212ENST00000487320 MYCNP04198 464 aaPredicted RBP11.65□□□□□ -0.54
CLHC1-212ENST00000487320 POTEHQ6S545 545 aa11.51□□□□□ -0.57
CLHC1-212ENST00000487320 POLA2Q14181 598 aa11.45□□□□□ -0.58
CLHC1-212ENST00000487320 RBM42Q9BTD8 480 aaKnown RBP11.44□□□□□ -0.58
CLHC1-212ENST00000487320 RTN4Q9NQC3 1192 aaKnown RBP11.43□□□□□ -0.58
CLHC1-212ENST00000487320 AMER1Q5JTC6 1135 aaPredicted RBP11.41□□□□□ -0.58
CLHC1-212ENST00000487320 SLC24A1O60721 1099 aa11.4□□□□□ -0.58
CLHC1-212ENST00000487320 ATF5Q9Y2D1 282 aaPredicted RBP11.33□□□□□ -0.6
CLHC1-212ENST00000487320 ATXN8OSP0DMR3 200 aa11.32□□□□□ -0.6
CLHC1-212ENST00000487320 ZBTB12Q9Y330 459 aaPredicted RBP11.26□□□□□ -0.61
CLHC1-212ENST00000487320 FKBP8Q14318 412 aa11.2□□□□□ -0.62
CLHC1-212ENST00000487320 CHRDL2Q6WN34 429 aa11.17□□□□□ -0.62
CLHC1-212ENST00000487320 AKT1S1Q96B36 256 aa11.15□□□□□ -0.62
CLHC1-212ENST00000487320 OSCARQ8IYS5 282 aa11.08□□□□□ -0.64
CLHC1-212ENST00000487320 REM2Q8IYK8 340 aaPredicted RBP11.02□□□□□ -0.65
CLHC1-212ENST00000487320 FBLN2P98095 1184 aa10.93□□□□□ -0.66
CLHC1-212ENST00000487320 SPDYE2BA6NHP3 402 aa10.91□□□□□ -0.66
CLHC1-212ENST00000487320 SPDYE6P0CI01 402 aa10.91□□□□□ -0.66
CLHC1-212ENST00000487320 SPDYE2Q495Y8 402 aa10.91□□□□□ -0.66
CLHC1-212ENST00000487320 PITPNM1O00562 1244 aa10.89□□□□□ -0.67
CLHC1-212ENST00000487320 PIP4P2Q8N4L2 257 aa10.89□□□□□ -0.67
CLHC1-212ENST00000487320 FXR2P51116 673 aaKnown RBP eCLIP10.85□□□□□ -0.67
CLHC1-212ENST00000487320 MKRN4PQ13434 485 aaPredicted RBP10.84□□□□□ -0.67
CLHC1-212ENST00000487320 SP7Q8TDD2 431 aaPredicted RBP10.78□□□□□ -0.68
CLHC1-212ENST00000487320 SSUH2Q9Y2M2 353 aa10.76□□□□□ -0.69
CLHC1-212ENST00000487320 ZNF692Q9BU19 519 aaPredicted RBP10.72□□□□□ -0.69
CLHC1-212ENST00000487320 SPDYE1Q8NFV5 336 aaPredicted RBP10.71□□□□□ -0.69
CLHC1-212ENST00000487320 HAX1O00165 279 aa10.68□□□□□ -0.7
CLHC1-212ENST00000487320 CLEC11AQ9Y240 323 aa10.63□□□□□ -0.71
CLHC1-212ENST00000487320 PRKAR2AP13861 404 aaKnown RBP10.6□□□□□ -0.71
CLHC1-212ENST00000487320 FBXO3Q9UK99 471 aa10.6□□□□□ -0.71
CLHC1-212ENST00000487320 PROM2Q8N271 834 aa10.58□□□□□ -0.72
CLHC1-212ENST00000487320 PABPN1Q86U42 306 aaKnown RBP eCLIP10.56□□□□□ -0.72
CLHC1-212ENST00000487320 SPDYE4A6NLX3 237 aa10.55□□□□□ -0.72
CLHC1-212ENST00000487320 EVX2Q03828 476 aa10.54□□□□□ -0.72
CLHC1-212ENST00000487320 PLCB2Q00722 1185 aa10.52□□□□□ -0.73
CLHC1-212ENST00000487320 C19orf67A6NJJ6 358 aa10.5□□□□□ -0.73
CLHC1-212ENST00000487320 PRR29P0C7W0 189 aa10.49□□□□□ -0.73
CLHC1-212ENST00000487320 VASPP50552 380 aaPredicted RBP10.48□□□□□ -0.73
CLHC1-212ENST00000487320 CHADLQ6NUI6 762 aa10.44□□□□□ -0.74
CLHC1-212ENST00000487320 IFNLR1Q8IU57 520 aaPredicted RBP10.41□□□□□ -0.74
CLHC1-212ENST00000487320 GABBR2O75899 941 aa10.33□□□□□ -0.76
CLHC1-212ENST00000487320 PKD2Q13563 968 aa10.33□□□□□ -0.76
CLHC1-212ENST00000487320 FARP1Q9Y4F1 1045 aaPredicted RBP10.33□□□□□ -0.76
CLHC1-212ENST00000487320 HAP1P54257 671 aaPredicted RBP10.31□□□□□ -0.76
CLHC1-212ENST00000487320 STAG3Q9UJ98 1225 aa10.31□□□□□ -0.76
CLHC1-212ENST00000487320 CD44P16070 742 aaKnown RBP10.27□□□□□ -0.77
CLHC1-212ENST00000487320 DCAF8L2P0C7V8 631 aa10.25□□□□□ -0.77
CLHC1-212ENST00000487320 CLCN6P51797 869 aa10.24□□□□□ -0.77
CLHC1-212ENST00000487320 CREBZFQ9NS37 354 aa10.23□□□□□ -0.77
CLHC1-212ENST00000487320 VSIG10Q8N0Z9 540 aa10.22□□□□□ -0.77
CLHC1-212ENST00000487320 BCANQ96GW7 911 aa10.21□□□□□ -0.77
CLHC1-212ENST00000487320 ZNF579Q8NAF0 562 aaKnown RBP10.15□□□□□ -0.78
CLHC1-212ENST00000487320 BBXQ8WY36 941 aaPredicted RBP10.13□□□□□ -0.79
CLHC1-212ENST00000487320 SPOCK2Q92563 424 aa10.13□□□□□ -0.79
CLHC1-212ENST00000487320 POTEIP0CG38 1075 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms