RNA–Protein interactions for RNA: ENST00000466020.1

CLHC1-211, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 5

Gene CLHC1, Length 153 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-211ENST00000466020 AEBP2Q6ZN18 517 aaPredicted RBP10.17□□□□□ -0.78
CLHC1-211ENST00000466020 CHIC1Q5VXU3 224 aa9.8□□□□□ -0.84
CLHC1-211ENST00000466020 SENP3Q9H4L4 574 aaPredicted RBP8.87□□□□□ -0.99
CLHC1-211ENST00000466020 PHF23Q9BUL5 403 aaPredicted RBP8.66□□□□□ -1.02
CLHC1-211ENST00000466020 FOXD1Q16676 465 aa8.13□□□□□ -1.11
CLHC1-211ENST00000466020 PLPPR3Q6T4P5 718 aa7.91□□□□□ -1.14
CLHC1-211ENST00000466020 MSH5O43196 834 aa7.76□□□□□ -1.17
CLHC1-211ENST00000466020 PIAS4Q8N2W9 510 aaPredicted RBP7.68□□□□□ -1.18
CLHC1-211ENST00000466020 ADRA2BP18089 450 aa7.57□□□□□ -1.2
CLHC1-211ENST00000466020 PPP6R1Q9UPN7 881 aa7.55□□□□□ -1.2
CLHC1-211ENST00000466020 POTEDQ86YR6 584 aa7.4□□□□□ -1.22
CLHC1-211ENST00000466020 SCAF1Q9H7N4 1312 aaKnown RBP7.15□□□□□ -1.26
CLHC1-211ENST00000466020 DMRT2Q9Y5R5 561 aa6.99□□□□□ -1.29
CLHC1-211ENST00000466020 MAPK8IP2Q13387 824 aaPredicted RBP6.9□□□□□ -1.3
CLHC1-211ENST00000466020 PPP4R3CPQ6ZMV5 832 aa6.87□□□□□ -1.31
CLHC1-211ENST00000466020 CNKSR2Q8WXI2 1034 aa6.8□□□□□ -1.32
CLHC1-211ENST00000466020 NCBP3Q53F19 620 aaKnown RBP6.75□□□□□ -1.33
CLHC1-211ENST00000466020 HOXD11P31277 338 aaPredicted RBP6.73□□□□□ -1.33
CLHC1-211ENST00000466020 RNF216Q9NWF9 866 aaPredicted RBP6.73□□□□□ -1.33
CLHC1-211ENST00000466020 DCAF8L1A6NGE4 600 aa6.71□□□□□ -1.34
CLHC1-211ENST00000466020 DNAJC5BQ9UF47 199 aa6.61□□□□□ -1.35
CLHC1-211ENST00000466020 CACNB1Q02641 598 aaPredicted RBP6.59□□□□□ -1.35
CLHC1-211ENST00000466020 RNF39Q9H2S5 420 aa6.54□□□□□ -1.36
CLHC1-211ENST00000466020 C1QBPQ07021 282 aaKnown RBP6.52□□□□□ -1.37
CLHC1-211ENST00000466020 NPM3O75607 178 aaKnown RBP6.49□□□□□ -1.37
CLHC1-211ENST00000466020 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.46□□□□□ -1.38
CLHC1-211ENST00000466020 KCNA4P22459 653 aa6.35□□□□□ -1.39
CLHC1-211ENST00000466020 APLP2Q06481 763 aa6.32□□□□□ -1.4
CLHC1-211ENST00000466020 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.27□□□□□ -1.41
CLHC1-211ENST00000466020 HNRNPUL2Q1KMD3 747 aaKnown RBP6.27□□□□□ -1.41
CLHC1-211ENST00000466020 U3KPZ7 1027 aaPredicted RBP6.24□□□□□ -1.41
CLHC1-211ENST00000466020 CAPN15O75808 1086 aa6.2□□□□□ -1.42
CLHC1-211ENST00000466020 SAMD1Q6SPF0 538 aaPredicted RBP6.19□□□□□ -1.42
CLHC1-211ENST00000466020 ZNF219Q9P2Y4 722 aaPredicted RBP6.17□□□□□ -1.42
CLHC1-211ENST00000466020 SLC4A2P04920 1241 aa6.15□□□□□ -1.42
CLHC1-211ENST00000466020 DSG3P32926 999 aa6.11□□□□□ -1.43
CLHC1-211ENST00000466020 SPINK5Q9NQ38 1064 aaPredicted RBP6.11□□□□□ -1.43
CLHC1-211ENST00000466020 MYCNP04198 464 aaPredicted RBP6.1□□□□□ -1.43
CLHC1-211ENST00000466020 SLC4A1APQ9BWU0 796 aaKnown RBP6.08□□□□□ -1.44
CLHC1-211ENST00000466020 TRHP20396 242 aaPredicted RBP6.07□□□□□ -1.44
CLHC1-211ENST00000466020 FOXD4L1Q9NU39 408 aa6.02□□□□□ -1.45
CLHC1-211ENST00000466020 ABCB7O75027 752 aa5.98□□□□□ -1.45
CLHC1-211ENST00000466020 RBM42Q9BTD8 480 aaKnown RBP5.98□□□□□ -1.45
CLHC1-211ENST00000466020 ZBTB12Q9Y330 459 aaPredicted RBP5.96□□□□□ -1.46
CLHC1-211ENST00000466020 POLA2Q14181 598 aa5.91□□□□□ -1.46
CLHC1-211ENST00000466020 ATXN8OSP0DMR3 200 aa5.9□□□□□ -1.46
CLHC1-211ENST00000466020 POTEHQ6S545 545 aa5.84□□□□□ -1.47
CLHC1-211ENST00000466020 AKT1S1Q96B36 256 aa5.79□□□□□ -1.48
CLHC1-211ENST00000466020 ZBTB22O15209 634 aa5.78□□□□□ -1.48
CLHC1-211ENST00000466020 FBLN2P98095 1184 aa5.78□□□□□ -1.48
CLHC1-211ENST00000466020 ATF5Q9Y2D1 282 aaPredicted RBP5.77□□□□□ -1.49
CLHC1-211ENST00000466020 CHRDL2Q6WN34 429 aa5.74□□□□□ -1.49
CLHC1-211ENST00000466020 OSCARQ8IYS5 282 aa5.71□□□□□ -1.5
CLHC1-211ENST00000466020 SPDYE2BA6NHP3 402 aa5.7□□□□□ -1.5
CLHC1-211ENST00000466020 SPDYE6P0CI01 402 aa5.7□□□□□ -1.5
CLHC1-211ENST00000466020 SPDYE2Q495Y8 402 aa5.7□□□□□ -1.5
CLHC1-211ENST00000466020 REM2Q8IYK8 340 aaPredicted RBP5.67□□□□□ -1.5
CLHC1-211ENST00000466020 SPDYE1Q8NFV5 336 aaPredicted RBP5.61□□□□□ -1.51
CLHC1-211ENST00000466020 PITPNM1O00562 1244 aa5.59□□□□□ -1.51
CLHC1-211ENST00000466020 ZNF692Q9BU19 519 aaPredicted RBP5.59□□□□□ -1.51
CLHC1-211ENST00000466020 PIP4P2Q8N4L2 257 aa5.57□□□□□ -1.52
CLHC1-211ENST00000466020 CSRNP3Q8WYN3 585 aa5.57□□□□□ -1.52
CLHC1-211ENST00000466020 FXR2P51116 673 aaKnown RBP eCLIP5.56□□□□□ -1.52
CLHC1-211ENST00000466020 SSUH2Q9Y2M2 353 aa5.56□□□□□ -1.52
CLHC1-211ENST00000466020 MKRN4PQ13434 485 aaPredicted RBP5.54□□□□□ -1.52
CLHC1-211ENST00000466020 EHMT2Q96KQ7 1210 aa5.54□□□□□ -1.52
CLHC1-211ENST00000466020 CLEC11AQ9Y240 323 aa5.52□□□□□ -1.53
CLHC1-211ENST00000466020 SP7Q8TDD2 431 aaPredicted RBP5.51□□□□□ -1.53
CLHC1-211ENST00000466020 HAX1O00165 279 aa5.5□□□□□ -1.53
CLHC1-211ENST00000466020 PABPN1Q86U42 306 aaKnown RBP eCLIP5.48□□□□□ -1.53
CLHC1-211ENST00000466020 PRR29P0C7W0 189 aa5.47□□□□□ -1.53
CLHC1-211ENST00000466020 PRKAR2AP13861 404 aaKnown RBP5.47□□□□□ -1.53
CLHC1-211ENST00000466020 STAG3Q9UJ98 1225 aa5.47□□□□□ -1.53
CLHC1-211ENST00000466020 CLCN6P51797 869 aa5.4□□□□□ -1.54
CLHC1-211ENST00000466020 SPDYE4A6NLX3 237 aa5.39□□□□□ -1.55
CLHC1-211ENST00000466020 C19orf67A6NJJ6 358 aa5.38□□□□□ -1.55
CLHC1-211ENST00000466020 CHADLQ6NUI6 762 aa5.34□□□□□ -1.55
CLHC1-211ENST00000466020 FARP1Q9Y4F1 1045 aaPredicted RBP5.34□□□□□ -1.55
CLHC1-211ENST00000466020 PAK3O75914 559 aaPredicted RBP5.32□□□□□ -1.56
CLHC1-211ENST00000466020 NPM1P06748 294 aaKnown RBP eCLIP5.31□□□□□ -1.56
CLHC1-211ENST00000466020 CD44P16070 742 aaKnown RBP5.31□□□□□ -1.56
CLHC1-211ENST00000466020 PLEKHG5O94827 1062 aa5.3□□□□□ -1.56
CLHC1-211ENST00000466020 EVX2Q03828 476 aa5.28□□□□□ -1.56
CLHC1-211ENST00000466020 GABBR2O75899 941 aa5.27□□□□□ -1.57
CLHC1-211ENST00000466020 CREBZFQ9NS37 354 aa5.26□□□□□ -1.57
CLHC1-211ENST00000466020 ZNF579Q8NAF0 562 aaKnown RBP5.25□□□□□ -1.57
CLHC1-211ENST00000466020 PROM2Q8N271 834 aa5.24□□□□□ -1.57
CLHC1-211ENST00000466020 ZRANB1Q9UGI0 708 aa5.24□□□□□ -1.57
CLHC1-211ENST00000466020 DCBLD2Q96PD2 775 aa5.22□□□□□ -1.57
CLHC1-211ENST00000466020 ZBTB47Q9UFB7 747 aaPredicted RBP5.22□□□□□ -1.57
CLHC1-211ENST00000466020 LHX8Q68G74 356 aa5.16□□□□□ -1.58
CLHC1-211ENST00000466020 MIER1Q8N108 512 aa5.16□□□□□ -1.58
CLHC1-211ENST00000466020 MNX1P50219 401 aaPredicted RBP5.15□□□□□ -1.59
CLHC1-211ENST00000466020 PLCD3Q8N3E9 789 aa5.15□□□□□ -1.59
CLHC1-211ENST00000466020 FBXO3Q9UK99 471 aa5.15□□□□□ -1.59
CLHC1-211ENST00000466020 FKBP8Q14318 412 aa5.11□□□□□ -1.59
CLHC1-211ENST00000466020 GALR2O43603 387 aaPredicted RBP5.1□□□□□ -1.59
CLHC1-211ENST00000466020 PHF12Q96QT6 1004 aa5.1□□□□□ -1.59
CLHC1-211ENST00000466020 TSPYL2Q9H2G4 693 aaPredicted RBP5.09□□□□□ -1.59
CLHC1-211ENST00000466020 POTEIP0CG38 1075 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms