RNA–Protein interactions for RNA: ENST00000506789.5

CDK7-205, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5

Gene CDK7, Length 477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-205ENST00000506789 NISCHQ9Y2I1 1504 aa30.57■■■□□ 2.48
CDK7-205ENST00000506789 CCDC180Q9P1Z9 1646 aa27.17■■□□□ 1.94
CDK7-205ENST00000506789 AEBP2Q6ZN18 517 aaPredicted RBP26.88■■□□□ 1.89
CDK7-205ENST00000506789 ABCC9O60706 1549 aa26.38■■□□□ 1.81
CDK7-205ENST00000506789 CHIC1Q5VXU3 224 aa25.74■■□□□ 1.71
CDK7-205ENST00000506789 RB1CC1Q8TDY2 1594 aa25.53■■□□□ 1.68
CDK7-205ENST00000506789 DCAF8L2P0C7V8 631 aa25.53■■□□□ 1.68
CDK7-205ENST00000506789 NACADO15069 1562 aa25.52■■□□□ 1.68
CDK7-205ENST00000506789 ZCCHC6Q5VYS8 1495 aaKnown RBP25.48■■□□□ 1.67
CDK7-205ENST00000506789 MYO15BQ96JP2 1530 aa25.42■■□□□ 1.66
CDK7-205ENST00000506789 DCAF1Q9Y4B6 1507 aa25.35■■□□□ 1.65
CDK7-205ENST00000506789 UNC13AQ9UPW8 1703 aa24.81■■□□□ 1.56
CDK7-205ENST00000506789 SCRIBQ14160 1630 aa24.74■■□□□ 1.55
CDK7-205ENST00000506789 PABPN1Q86U42 306 aaKnown RBP eCLIP24.65■■□□□ 1.54
CDK7-205ENST00000506789 BICRAQ9NZM4 1560 aa24.61■■□□□ 1.53
CDK7-205ENST00000506789 SHROOM4Q9ULL8 1493 aa24.56■■□□□ 1.52
CDK7-205ENST00000506789 DNAJC5BQ9UF47 199 aa24.48■■□□□ 1.51
CDK7-205ENST00000506789 EIF4G1Q04637 1599 aaKnown RBP24.02■■□□□ 1.44
CDK7-205ENST00000506789 CC2D2AQ9P2K1 1620 aa23.88■■□□□ 1.41
CDK7-205ENST00000506789 BAZ1AQ9NRL2 1556 aaPredicted RBP23.74■■□□□ 1.39
CDK7-205ENST00000506789 CECR2Q9BXF3 1484 aa23.73■■□□□ 1.39
CDK7-205ENST00000506789 SMARCA4P51532 1647 aa23.69■■□□□ 1.38
CDK7-205ENST00000506789 SMARCA2P51531 1590 aa23.58■■□□□ 1.37
CDK7-205ENST00000506789 ATAD2BQ9ULI0 1458 aa23.52■■□□□ 1.36
CDK7-205ENST00000506789 NCAPD3P42695 1498 aa23.51■■□□□ 1.35
CDK7-205ENST00000506789 MROH2BQ7Z745 1585 aa23.51■■□□□ 1.35
CDK7-205ENST00000506789 PEG3Q9GZU2 1588 aa23.47■■□□□ 1.35
CDK7-205ENST00000506789 HMGXB3Q12766 1538 aa23.43■■□□□ 1.34
CDK7-205ENST00000506789 BAZ1BQ9UIG0 1483 aaKnown RBP23.39■■□□□ 1.34
CDK7-205ENST00000506789 RSF1Q96T23 1441 aaPredicted RBP23.31■■□□□ 1.32
CDK7-205ENST00000506789 WIZO95785 1651 aa23.26■■□□□ 1.31
CDK7-205ENST00000506789 TOP2AP11388 1531 aaKnown RBP23.09■■□□□ 1.29
CDK7-205ENST00000506789 SENP3Q9H4L4 574 aaPredicted RBP23.09■■□□□ 1.29
CDK7-205ENST00000506789 LAMC3Q9Y6N6 1575 aa22.92■■□□□ 1.26
CDK7-205ENST00000506789 CADPSQ9ULU8 1353 aa22.86■■□□□ 1.25
CDK7-205ENST00000506789 SUPT5HO00267 1087 aaKnown RBP22.85■■□□□ 1.25
CDK7-205ENST00000506789 ERCC6Q03468 1493 aa22.83■■□□□ 1.25
CDK7-205ENST00000506789 NESP48681 1621 aa22.82■■□□□ 1.24
CDK7-205ENST00000506789 PDS5BQ9NTI5 1447 aa22.8■■□□□ 1.24
CDK7-205ENST00000506789 CCDC88BA6NC98 1476 aa22.78■■□□□ 1.24
CDK7-205ENST00000506789 PHF23Q9BUL5 403 aaPredicted RBP22.74■■□□□ 1.23
CDK7-205ENST00000506789 CFTRP13569 1480 aa22.73■■□□□ 1.23
CDK7-205ENST00000506789 KIF21AQ7Z4S6 1674 aa22.58■■□□□ 1.21
CDK7-205ENST00000506789 FANCD2Q9BXW9 1451 aa22.58■■□□□ 1.2
CDK7-205ENST00000506789 PRDM2Q13029 1718 aa22.57■■□□□ 1.2
CDK7-205ENST00000506789 CEP164Q9UPV0 1460 aa22.57■■□□□ 1.2
CDK7-205ENST00000506789 CUX2O14529 1486 aa22.54■■□□□ 1.2
CDK7-205ENST00000506789 MRC2Q9UBG0 1479 aa22.49■■□□□ 1.19
CDK7-205ENST00000506789 THOC2Q8NI27 1593 aaKnown RBP22.49■■□□□ 1.19
CDK7-205ENST00000506789 WDR62O43379 1518 aa22.39■■□□□ 1.17
CDK7-205ENST00000506789 DNAJC5Q9H3Z4 198 aa22.38■■□□□ 1.17
CDK7-205ENST00000506789 ABCC8Q09428 1581 aa22.33■■□□□ 1.17
CDK7-205ENST00000506789 URB2Q14146 1524 aaKnown RBP22.28■■□□□ 1.16
CDK7-205ENST00000506789 DNMBPQ6XZF7 1577 aa22.23■■□□□ 1.15
CDK7-205ENST00000506789 TOPBP1Q92547 1522 aa22.21■■□□□ 1.15
CDK7-205ENST00000506789 IFT140Q96RY7 1462 aa22.09■■□□□ 1.13
CDK7-205ENST00000506789 CUX1P39880 1505 aa22.06■■□□□ 1.12
CDK7-205ENST00000506789 WRNQ14191 1432 aaPredicted RBP eCLIP22.04■■□□□ 1.12
CDK7-205ENST00000506789 POLA1P09884 1462 aaPredicted RBP22.03■■□□□ 1.12
CDK7-205ENST00000506789 FGD5Q6ZNL6 1462 aa22■■□□□ 1.11
CDK7-205ENST00000506789 SOGA1O94964 1423 aa21.98■■□□□ 1.11
CDK7-205ENST00000506789 TOP2BQ02880 1626 aa21.95■■□□□ 1.1
CDK7-205ENST00000506789 BIVM-ERCC5R4GMW8 1640 aa21.94■■□□□ 1.1
CDK7-205ENST00000506789 TARBP1Q13395 1621 aaKnown RBP21.93■■□□□ 1.1
CDK7-205ENST00000506789 WDR97A6NE52 1622 aa21.9■■□□□ 1.1
CDK7-205ENST00000506789 SYNJ1O43426 1573 aa21.9■■□□□ 1.1
CDK7-205ENST00000506789 RAD54L2Q9Y4B4 1467 aa21.89■■□□□ 1.09
CDK7-205ENST00000506789 ZNF608Q9ULD9 1512 aaPredicted RBP21.87■■□□□ 1.09
CDK7-205ENST00000506789 EIF4G3O43432 1585 aaKnown RBP21.85■■□□□ 1.09
CDK7-205ENST00000506789 ABCA10Q8WWZ4 1543 aa21.82■■□□□ 1.08
CDK7-205ENST00000506789 AQRO60306 1485 aaKnown RBP eCLIP21.8■■□□□ 1.087e-8■■■■■ 26.9
CDK7-205ENST00000506789 TDRD9Q8NDG6 1382 aaKnown RBP21.78■■□□□ 1.08
CDK7-205ENST00000506789 GAPVD1Q14C86 1478 aa21.73■■□□□ 1.07
CDK7-205ENST00000506789 GRIN2BQ13224 1484 aa21.72■■□□□ 1.07
CDK7-205ENST00000506789 ABCA5Q8WWZ7 1642 aa21.69■■□□□ 1.06
CDK7-205ENST00000506789 MAGI1Q96QZ7 1491 aaPredicted RBP21.66■■□□□ 1.06
CDK7-205ENST00000506789 TRIM41Q8WV44 630 aa21.65■■□□□ 1.06
CDK7-205ENST00000506789 PBRM1Q86U86 1689 aa21.64■■□□□ 1.05
CDK7-205ENST00000506789 OSCARQ8IYS5 282 aa21.64■■□□□ 1.05
CDK7-205ENST00000506789 SNAPC4Q5SXM2 1469 aa21.63■■□□□ 1.05
CDK7-205ENST00000506789 KIF27Q86VH2 1401 aa21.61■■□□□ 1.05
CDK7-205ENST00000506789 FBLN2P98095 1184 aa21.59■■□□□ 1.05
CDK7-205ENST00000506789 ERICH3Q5RHP9 1530 aa21.59■■□□□ 1.05
CDK7-205ENST00000506789 CHMP7Q8WUX9 453 aaPredicted RBP21.58■■□□□ 1.05
CDK7-205ENST00000506789 SYNJ2O15056 1496 aa21.56■■□□□ 1.04
CDK7-205ENST00000506789 CHD1O14646 1710 aa21.52■■□□□ 1.04
CDK7-205ENST00000506789 FHAD1B1AJZ9 1412 aa21.5■■□□□ 1.03
CDK7-205ENST00000506789 ADAMTS12P58397 1594 aa21.48■■□□□ 1.03
CDK7-205ENST00000506789 CUL7Q14999 1698 aa21.44■■□□□ 1.02
CDK7-205ENST00000506789 IGF1RP08069 1367 aa21.42■■□□□ 1.02
CDK7-205ENST00000506789 GRIN2AQ12879 1464 aa21.41■■□□□ 1.02
CDK7-205ENST00000506789 FOXD1Q16676 465 aa21.39■■□□□ 1.01
CDK7-205ENST00000506789 CARMIL1Q5VZK9 1371 aa21.35■■□□□ 1.01
CDK7-205ENST00000506789 EEA1Q15075 1411 aa21.33■■□□□ 1.01
CDK7-205ENST00000506789 CLASP1Q7Z460 1538 aa21.3■■□□□ 1
CDK7-205ENST00000506789 NUP160Q12769 1436 aa21.29■■□□□ 1
CDK7-205ENST00000506789 RUSC2Q8N2Y8 1516 aa21.28■■□□□ 1
CDK7-205ENST00000506789 CEP170Q5SW79 1584 aa21.25■□□□□ 0.99
CDK7-205ENST00000506789 RAPGEF2Q9Y4G8 1499 aa21.25■□□□□ 0.99
CDK7-205ENST00000506789 RIMBP3CA6NJZ7 1639 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 719.8 ms