RNA–Protein interactions for RNA: ENST00000407472.5

RTL10-203, Transcript of retrotransposon Gag like 10, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTL10, Length 6,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL10-203ENST00000407472 DCAF8L2P0C7V8 631 aa18.59■□□□□ 0.57
RTL10-203ENST00000407472 SUPT5HO00267 1087 aaKnown RBP17.4■□□□□ 0.38
RTL10-203ENST00000407472 SHROOM4Q9ULL8 1493 aa17.23■□□□□ 0.35
RTL10-203ENST00000407472 EHMT2Q96KQ7 1210 aa17.2■□□□□ 0.34
RTL10-203ENST00000407472 NISCHQ9Y2I1 1504 aa17.17■□□□□ 0.34
RTL10-203ENST00000407472 PELP1Q8IZL8 1130 aaKnown RBP16.65■□□□□ 0.26
RTL10-203ENST00000407472 TTBK1Q5TCY1 1321 aaPredicted RBP16.56■□□□□ 0.24
RTL10-203ENST00000407472 APLP2Q06481 763 aa16.53■□□□□ 0.24
RTL10-203ENST00000407472 FAM9AQ8IZU1 332 aaPredicted RBP16.51■□□□□ 0.23
RTL10-203ENST00000407472 RANGAP1P46060 587 aaPredicted RBP16.43■□□□□ 0.22
RTL10-203ENST00000407472 ATP1B4Q9UN42 357 aaPredicted RBP16.25■□□□□ 0.19
RTL10-203ENST00000407472 MYT1Q01538 1121 aa16.13■□□□□ 0.17
RTL10-203ENST00000407472 PCGF6Q9BYE7 350 aa16.11■□□□□ 0.17
RTL10-203ENST00000407472 ERICH6Q7L0X2 663 aa16.07■□□□□ 0.16
RTL10-203ENST00000407472 TRIM41Q8WV44 630 aa16.02■□□□□ 0.16
RTL10-203ENST00000407472 UBTFP17480 764 aaKnown RBP15.94■□□□□ 0.14
RTL10-203ENST00000407472 CCER1Q8TC90 406 aaPredicted RBP15.88■□□□□ 0.13
RTL10-203ENST00000407472 PPARGC1BQ86YN6 1023 aaKnown RBP15.81■□□□□ 0.12
RTL10-203ENST00000407472 MYT1LQ9UL68 1186 aa15.7■□□□□ 0.1
RTL10-203ENST00000407472 YTHDC1Q96MU7 727 aaKnown RBP15.66■□□□□ 0.1
RTL10-203ENST00000407472 CENPBP07199 599 aaPredicted RBP15.63■□□□□ 0.09
RTL10-203ENST00000407472 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.63■□□□□ 0.09
RTL10-203ENST00000407472 HNRNPUL2Q1KMD3 747 aaKnown RBP15.63■□□□□ 0.09
RTL10-203ENST00000407472 ZEB1P37275 1124 aaPredicted RBP15.6■□□□□ 0.09
RTL10-203ENST00000407472 ITGAEP38570 1179 aa15.58■□□□□ 0.08
RTL10-203ENST00000407472 CHIC1Q5VXU3 224 aa15.56■□□□□ 0.08
RTL10-203ENST00000407472 POLR3GLQ9BT43 218 aa15.53■□□□□ 0.08
RTL10-203ENST00000407472 NEFLP07196 543 aa15.46■□□□□ 0.07
RTL10-203ENST00000407472 CNGB1Q14028 1251 aaPredicted RBP15.44■□□□□ 0.06
RTL10-203ENST00000407472 LOC105371045A0A1W2PR82 267 aa15.31■□□□□ 0.04
RTL10-203ENST00000407472 SLC4A1APQ9BWU0 796 aaKnown RBP15.31■□□□□ 0.04
RTL10-203ENST00000407472 PABPN1Q86U42 306 aaKnown RBP eCLIP15.28■□□□□ 0.04
RTL10-203ENST00000407472 TRIM26Q12899 539 aaPredicted RBP15.26■□□□□ 0.03
RTL10-203ENST00000407472 ABCC9O60706 1549 aa15.23■□□□□ 0.03
RTL10-203ENST00000407472 FAM50AQ14320 339 aaKnown RBP15.12■□□□□ 0.01
RTL10-203ENST00000407472 DAXXQ9UER7 740 aaPredicted RBP15.11■□□□□ 0.01
RTL10-203ENST00000407472 FBLN2P98095 1184 aa15.06■□□□□ 0
RTL10-203ENST00000407472 TRIM52Q96A61 297 aa15.05■□□□□ -0
RTL10-203ENST00000407472 HRCP23327 699 aa15.04■□□□□ -0
RTL10-203ENST00000407472 NEUROD1Q13562 356 aa14.98□□□□□ -0.01
RTL10-203ENST00000407472 ZNF326Q5BKZ1 582 aaKnown RBP14.93□□□□□ -0.02
RTL10-203ENST00000407472 ARID3CA6NKF2 412 aa14.93□□□□□ -0.02
RTL10-203ENST00000407472 CLSPNQ9HAW4 1339 aa14.88□□□□□ -0.03
RTL10-203ENST00000407472 RTL5Q5HYW3 569 aaPredicted RBP14.85□□□□□ -0.03
RTL10-203ENST00000407472 BCANQ96GW7 911 aa14.84□□□□□ -0.03
RTL10-203ENST00000407472 P3H3Q8IVL6 736 aa14.84□□□□□ -0.03
RTL10-203ENST00000407472 SLC24A1O60721 1099 aa14.83□□□□□ -0.04
RTL10-203ENST00000407472 ZNF316A6NFI3 1004 aaPredicted RBP14.79□□□□□ -0.04
RTL10-203ENST00000407472 DIEXFQ68CQ4 756 aaKnown RBP14.78□□□□□ -0.04
RTL10-203ENST00000407472 BCL11AQ9H165 835 aa14.78□□□□□ -0.04
RTL10-203ENST00000407472 PLPPR3Q6T4P5 718 aa14.76□□□□□ -0.05
RTL10-203ENST00000407472 ZNF777Q9ULD5 760 aaPredicted RBP14.72□□□□□ -0.05
RTL10-203ENST00000407472 SCRIBQ14160 1630 aa14.64□□□□□ -0.07
RTL10-203ENST00000407472 ANP32CO43423 234 aa14.62□□□□□ -0.07
RTL10-203ENST00000407472 ZBTB47Q9UFB7 747 aaPredicted RBP14.61□□□□□ -0.07
RTL10-203ENST00000407472 CANXP27824 592 aaKnown RBP14.6□□□□□ -0.07
RTL10-203ENST00000407472 CHGAP10645 457 aaKnown RBP14.55□□□□□ -0.08
RTL10-203ENST00000407472 ESF1Q9H501 851 aaKnown RBP14.55□□□□□ -0.08
RTL10-203ENST00000407472 NEFMP07197 916 aa14.51□□□□□ -0.09
RTL10-203ENST00000407472 STAG3Q9UJ98 1225 aa14.51□□□□□ -0.09
RTL10-203ENST00000407472 CSRNP3Q8WYN3 585 aa14.46□□□□□ -0.09
RTL10-203ENST00000407472 CDK11AQ9UQ88 783 aaPredicted RBP14.42□□□□□ -0.1
RTL10-203ENST00000407472 GTF3C3Q9Y5Q9 886 aa14.42□□□□□ -0.1
RTL10-203ENST00000407472 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.41□□□□□ -0.1
RTL10-203ENST00000407472 NPM1P06748 294 aaKnown RBP eCLIP14.41□□□□□ -0.1
RTL10-203ENST00000407472 SENP3Q9H4L4 574 aaPredicted RBP14.41□□□□□ -0.1
RTL10-203ENST00000407472 GLIPR1L2Q4G1C9 344 aa14.4□□□□□ -0.1
RTL10-203ENST00000407472 EIF5BO60841 1220 aaKnown RBP14.37□□□□□ -0.11
RTL10-203ENST00000407472 CHIC2Q9UKJ5 165 aa14.37□□□□□ -0.11
RTL10-203ENST00000407472 SCAF1Q9H7N4 1312 aaKnown RBP14.34□□□□□ -0.11
RTL10-203ENST00000407472 NPM2Q86SE8 214 aaKnown RBP14.32□□□□□ -0.12
RTL10-203ENST00000407472 PLEKHG5O94827 1062 aa14.32□□□□□ -0.12
RTL10-203ENST00000407472 SALL2Q9Y467 1007 aaPredicted RBP14.32□□□□□ -0.12
RTL10-203ENST00000407472 TONSLQ96HA7 1378 aa14.29□□□□□ -0.12
RTL10-203ENST00000407472 KDM2AQ9Y2K7 1162 aa14.26□□□□□ -0.13
RTL10-203ENST00000407472 ZBTB7CA1YPR0 619 aa14.25□□□□□ -0.13
RTL10-203ENST00000407472 A0A0G2JS52 829 aa14.25□□□□□ -0.13
RTL10-203ENST00000407472 FAM9BQ8IZU0 186 aa14.25□□□□□ -0.13
RTL10-203ENST00000407472 CHMP7Q8WUX9 453 aaPredicted RBP14.25□□□□□ -0.13
RTL10-203ENST00000407472 DDX10Q13206 875 aaKnown RBP14.19□□□□□ -0.14
RTL10-203ENST00000407472 KCNH8Q96L42 1107 aa14.19□□□□□ -0.14
RTL10-203ENST00000407472 ZCCHC6Q5VYS8 1495 aaKnown RBP14.18□□□□□ -0.14
RTL10-203ENST00000407472 ANP32AP39687 249 aaKnown RBP14.17□□□□□ -0.14
RTL10-203ENST00000407472 HNRNPUQ00839 825 aaKnown RBP eCLIP14.16□□□□□ -0.146e-7■■□□□ 12.2
RTL10-203ENST00000407472 C14orf37Q86TY3 774 aa14.15□□□□□ -0.14
RTL10-203ENST00000407472 FKBP8Q14318 412 aa14.15□□□□□ -0.14
RTL10-203ENST00000407472 HSP90AA1P07900 732 aaKnown RBP14.13□□□□□ -0.15
RTL10-203ENST00000407472 TSPY4P0CV99 314 aa14.13□□□□□ -0.15
RTL10-203ENST00000407472 TSPY10P0CW01 314 aa14.13□□□□□ -0.15
RTL10-203ENST00000407472 HIRIP3Q9BW71 556 aaPredicted RBP14.13□□□□□ -0.15
RTL10-203ENST00000407472 MTUS2Q5JR59 1369 aa14.12□□□□□ -0.15
RTL10-203ENST00000407472 RRP7BPQ9NSQ0 103 aa14.1□□□□□ -0.15
RTL10-203ENST00000407472 WDR43Q15061 677 aaKnown RBP eCLIP14.1□□□□□ -0.153e-6■■■■□ 21.3
RTL10-203ENST00000407472 TMC1Q8TDI8 760 aa14.09□□□□□ -0.15
RTL10-203ENST00000407472 ARID4BQ4LE39 1312 aaPredicted RBP14.08□□□□□ -0.15
RTL10-203ENST00000407472 PPP1R15AO75807 674 aaPredicted RBP14.08□□□□□ -0.16
RTL10-203ENST00000407472 ACIN1Q9UKV3 1341 aaKnown RBP14.08□□□□□ -0.16
RTL10-203ENST00000407472 ANP32BQ92688 251 aaKnown RBP14.07□□□□□ -0.16
RTL10-203ENST00000407472 RB1CC1Q8TDY2 1594 aa14.06□□□□□ -0.16
RTL10-203ENST00000407472 CCDC180Q9P1Z9 1646 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms