RNA–Protein interactions for RNA: ENST00000464243.1

CLHC1-210, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 4

Gene CLHC1, Length 509 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-210ENST00000464243 AEBP2Q6ZN18 517 aaPredicted RBP30.62■■■□□ 2.49
CLHC1-210ENST00000464243 CHIC1Q5VXU3 224 aa29.34■■■□□ 2.29
CLHC1-210ENST00000464243 SENP3Q9H4L4 574 aaPredicted RBP26.02■■□□□ 1.76
CLHC1-210ENST00000464243 PHF23Q9BUL5 403 aaPredicted RBP25.77■■□□□ 1.72
CLHC1-210ENST00000464243 FOXD1Q16676 465 aa24.25■■□□□ 1.47
CLHC1-210ENST00000464243 PLPPR3Q6T4P5 718 aa23.55■■□□□ 1.36
CLHC1-210ENST00000464243 PPP6R1Q9UPN7 881 aa22.92■■□□□ 1.26
CLHC1-210ENST00000464243 ADRA2BP18089 450 aa22.85■■□□□ 1.25
CLHC1-210ENST00000464243 PIAS4Q8N2W9 510 aaPredicted RBP22.7■■□□□ 1.22
CLHC1-210ENST00000464243 MSH5O43196 834 aa22.54■■□□□ 1.2
CLHC1-210ENST00000464243 POTEDQ86YR6 584 aa21.52■■□□□ 1.04
CLHC1-210ENST00000464243 MAPK8IP2Q13387 824 aaPredicted RBP20.91■□□□□ 0.94
CLHC1-210ENST00000464243 SCAF1Q9H7N4 1312 aaKnown RBP20.85■□□□□ 0.93
CLHC1-210ENST00000464243 PPP4R3CPQ6ZMV5 832 aa20.7■□□□□ 0.9
CLHC1-210ENST00000464243 DMRT2Q9Y5R5 561 aa20.7■□□□□ 0.9
CLHC1-210ENST00000464243 CNKSR2Q8WXI2 1034 aa20.23■□□□□ 0.83
CLHC1-210ENST00000464243 HOXD11P31277 338 aaPredicted RBP20.06■□□□□ 0.8
CLHC1-210ENST00000464243 RNF216Q9NWF9 866 aaPredicted RBP19.98■□□□□ 0.79
CLHC1-210ENST00000464243 NCBP3Q53F19 620 aaKnown RBP19.96■□□□□ 0.79
CLHC1-210ENST00000464243 DCAF8L1A6NGE4 600 aa19.79■□□□□ 0.76
CLHC1-210ENST00000464243 NPM3O75607 178 aaKnown RBP19.72■□□□□ 0.75
CLHC1-210ENST00000464243 KCNA4P22459 653 aa19.61■□□□□ 0.73
CLHC1-210ENST00000464243 DNAJC5BQ9UF47 199 aa19.3■□□□□ 0.68
CLHC1-210ENST00000464243 RNF39Q9H2S5 420 aa19.29■□□□□ 0.68
CLHC1-210ENST00000464243 CACNB1Q02641 598 aaPredicted RBP19.16■□□□□ 0.66
CLHC1-210ENST00000464243 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.08■□□□□ 0.64
CLHC1-210ENST00000464243 C1QBPQ07021 282 aaKnown RBP19■□□□□ 0.63
CLHC1-210ENST00000464243 SLC4A2P04920 1241 aa18.77■□□□□ 0.6
CLHC1-210ENST00000464243 U3KPZ7 1027 aaPredicted RBP18.75■□□□□ 0.59
CLHC1-210ENST00000464243 SLC4A1APQ9BWU0 796 aaKnown RBP18.55■□□□□ 0.56
CLHC1-210ENST00000464243 SPINK5Q9NQ38 1064 aaPredicted RBP18.39■□□□□ 0.53
CLHC1-210ENST00000464243 CAPN15O75808 1086 aa18.3■□□□□ 0.52
CLHC1-210ENST00000464243 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.27■□□□□ 0.52
CLHC1-210ENST00000464243 HNRNPUL2Q1KMD3 747 aaKnown RBP18.27■□□□□ 0.52
CLHC1-210ENST00000464243 MYCNP04198 464 aaPredicted RBP18.21■□□□□ 0.51
CLHC1-210ENST00000464243 APLP2Q06481 763 aa18.19■□□□□ 0.5
CLHC1-210ENST00000464243 SAMD1Q6SPF0 538 aaPredicted RBP18.19■□□□□ 0.5
CLHC1-210ENST00000464243 FOXD4L1Q9NU39 408 aa18.18■□□□□ 0.5
CLHC1-210ENST00000464243 DSG3P32926 999 aa18.17■□□□□ 0.5
CLHC1-210ENST00000464243 TRHP20396 242 aaPredicted RBP18.09■□□□□ 0.49
CLHC1-210ENST00000464243 ZNF219Q9P2Y4 722 aaPredicted RBP18.07■□□□□ 0.48
CLHC1-210ENST00000464243 ZBTB22O15209 634 aa18.06■□□□□ 0.48
CLHC1-210ENST00000464243 ABCB7O75027 752 aa17.93■□□□□ 0.46
CLHC1-210ENST00000464243 ATF5Q9Y2D1 282 aaPredicted RBP17.81■□□□□ 0.44
CLHC1-210ENST00000464243 POLA2Q14181 598 aa17.68■□□□□ 0.42
CLHC1-210ENST00000464243 ATXN8OSP0DMR3 200 aa17.6■□□□□ 0.41
CLHC1-210ENST00000464243 CSRNP3Q8WYN3 585 aa17.48■□□□□ 0.39
CLHC1-210ENST00000464243 EHMT2Q96KQ7 1210 aa17.39■□□□□ 0.37
CLHC1-210ENST00000464243 ZBTB12Q9Y330 459 aaPredicted RBP17.33■□□□□ 0.36
CLHC1-210ENST00000464243 RBM42Q9BTD8 480 aaKnown RBP17.28■□□□□ 0.36
CLHC1-210ENST00000464243 OSCARQ8IYS5 282 aa17.12■□□□□ 0.33
CLHC1-210ENST00000464243 FBLN2P98095 1184 aa17.03■□□□□ 0.32
CLHC1-210ENST00000464243 MKRN4PQ13434 485 aaPredicted RBP17■□□□□ 0.31
CLHC1-210ENST00000464243 AKT1S1Q96B36 256 aa16.97■□□□□ 0.31
CLHC1-210ENST00000464243 POTEHQ6S545 545 aa16.91■□□□□ 0.3
CLHC1-210ENST00000464243 SPDYE2BA6NHP3 402 aa16.83■□□□□ 0.28
CLHC1-210ENST00000464243 SPDYE6P0CI01 402 aa16.83■□□□□ 0.28
CLHC1-210ENST00000464243 SPDYE2Q495Y8 402 aa16.83■□□□□ 0.28
CLHC1-210ENST00000464243 REM2Q8IYK8 340 aaPredicted RBP16.83■□□□□ 0.28
CLHC1-210ENST00000464243 CHRDL2Q6WN34 429 aa16.81■□□□□ 0.28
CLHC1-210ENST00000464243 ZNF692Q9BU19 519 aaPredicted RBP16.67■□□□□ 0.26
CLHC1-210ENST00000464243 SSUH2Q9Y2M2 353 aa16.67■□□□□ 0.26
CLHC1-210ENST00000464243 PITPNM1O00562 1244 aa16.64■□□□□ 0.25
CLHC1-210ENST00000464243 PIP4P2Q8N4L2 257 aa16.49■□□□□ 0.23
CLHC1-210ENST00000464243 SPDYE1Q8NFV5 336 aaPredicted RBP16.46■□□□□ 0.23
CLHC1-210ENST00000464243 PABPN1Q86U42 306 aaKnown RBP eCLIP16.45■□□□□ 0.22
CLHC1-210ENST00000464243 FXR2P51116 673 aaKnown RBP eCLIP16.44■□□□□ 0.22
CLHC1-210ENST00000464243 CLEC11AQ9Y240 323 aa16.4■□□□□ 0.22
CLHC1-210ENST00000464243 SPDYE4A6NLX3 237 aa16.32■□□□□ 0.2
CLHC1-210ENST00000464243 PRKAR2AP13861 404 aaKnown RBP16.2■□□□□ 0.18
CLHC1-210ENST00000464243 PRR29P0C7W0 189 aa16.18■□□□□ 0.18
CLHC1-210ENST00000464243 CHADLQ6NUI6 762 aa16.09■□□□□ 0.17
CLHC1-210ENST00000464243 HAX1O00165 279 aa16.08■□□□□ 0.16
CLHC1-210ENST00000464243 STAG3Q9UJ98 1225 aa16.03■□□□□ 0.16
CLHC1-210ENST00000464243 PROM2Q8N271 834 aa16.01■□□□□ 0.15
CLHC1-210ENST00000464243 SP7Q8TDD2 431 aaPredicted RBP15.99■□□□□ 0.15
CLHC1-210ENST00000464243 EVX2Q03828 476 aa15.95■□□□□ 0.14
CLHC1-210ENST00000464243 C19orf67A6NJJ6 358 aa15.9■□□□□ 0.14
CLHC1-210ENST00000464243 CREBZFQ9NS37 354 aa15.89■□□□□ 0.13
CLHC1-210ENST00000464243 FARP1Q9Y4F1 1045 aaPredicted RBP15.88■□□□□ 0.13
CLHC1-210ENST00000464243 FKBP8Q14318 412 aa15.81■□□□□ 0.12
CLHC1-210ENST00000464243 CD44P16070 742 aaKnown RBP15.7■□□□□ 0.1
CLHC1-210ENST00000464243 MNX1P50219 401 aaPredicted RBP15.68■□□□□ 0.1
CLHC1-210ENST00000464243 GABBR2O75899 941 aa15.59■□□□□ 0.09
CLHC1-210ENST00000464243 NPM1P06748 294 aaKnown RBP eCLIP15.56■□□□□ 0.08
CLHC1-210ENST00000464243 ZRANB1Q9UGI0 708 aa15.52■□□□□ 0.08
CLHC1-210ENST00000464243 MIER1Q8N108 512 aa15.51■□□□□ 0.07
CLHC1-210ENST00000464243 ZNF579Q8NAF0 562 aaKnown RBP15.49■□□□□ 0.07
CLHC1-210ENST00000464243 PAK3O75914 559 aaPredicted RBP15.43■□□□□ 0.06
CLHC1-210ENST00000464243 PLEKHG5O94827 1062 aa15.43■□□□□ 0.06
CLHC1-210ENST00000464243 PLCD3Q8N3E9 789 aa15.42■□□□□ 0.06
CLHC1-210ENST00000464243 CLCN6P51797 869 aa15.41■□□□□ 0.06
CLHC1-210ENST00000464243 FBXO3Q9UK99 471 aa15.37■□□□□ 0.05
CLHC1-210ENST00000464243 PHF12Q96QT6 1004 aa15.36■□□□□ 0.05
CLHC1-210ENST00000464243 TSPYL2Q9H2G4 693 aaPredicted RBP15.31■□□□□ 0.04
CLHC1-210ENST00000464243 POTEIP0CG38 1075 aa15.29■□□□□ 0.04
CLHC1-210ENST00000464243 GALR2O43603 387 aaPredicted RBP15.28■□□□□ 0.04
CLHC1-210ENST00000464243 RASEFQ8IZ41 740 aa15.28■□□□□ 0.04
CLHC1-210ENST00000464243 ZBTB47Q9UFB7 747 aaPredicted RBP15.27■□□□□ 0.04
CLHC1-210ENST00000464243 CCDC61Q9Y6R9 512 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms