RNA–Protein interactions for RNA: ENST00000463300.1

CLHC1-209, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 4

Gene CLHC1, Length 572 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-209ENST00000463300 AEBP2Q6ZN18 517 aaPredicted RBP24.17■■□□□ 1.46
CLHC1-209ENST00000463300 CHIC1Q5VXU3 224 aa23.84■■□□□ 1.41
CLHC1-209ENST00000463300 PHF23Q9BUL5 403 aaPredicted RBP20.97■□□□□ 0.95
CLHC1-209ENST00000463300 SENP3Q9H4L4 574 aaPredicted RBP20.52■□□□□ 0.88
CLHC1-209ENST00000463300 PLPPR3Q6T4P5 718 aa19.46■□□□□ 0.71
CLHC1-209ENST00000463300 FOXD1Q16676 465 aa18.99■□□□□ 0.63
CLHC1-209ENST00000463300 PPP6R1Q9UPN7 881 aa18.43■□□□□ 0.54
CLHC1-209ENST00000463300 ADRA2BP18089 450 aa18.41■□□□□ 0.54
CLHC1-209ENST00000463300 PIAS4Q8N2W9 510 aaPredicted RBP17.95■□□□□ 0.46
CLHC1-209ENST00000463300 MSH5O43196 834 aa17.47■□□□□ 0.39
CLHC1-209ENST00000463300 PPP4R3CPQ6ZMV5 832 aa17.15■□□□□ 0.34
CLHC1-209ENST00000463300 KCNA4P22459 653 aa16.97■□□□□ 0.31
CLHC1-209ENST00000463300 SCAF1Q9H7N4 1312 aaKnown RBP16.91■□□□□ 0.3
CLHC1-209ENST00000463300 NCBP3Q53F19 620 aaKnown RBP16.79■□□□□ 0.28
CLHC1-209ENST00000463300 CNKSR2Q8WXI2 1034 aa16.65■□□□□ 0.26
CLHC1-209ENST00000463300 MAPK8IP2Q13387 824 aaPredicted RBP16.64■□□□□ 0.25
CLHC1-209ENST00000463300 NPM3O75607 178 aaKnown RBP16.52■□□□□ 0.24
CLHC1-209ENST00000463300 DMRT2Q9Y5R5 561 aa16.41■□□□□ 0.22
CLHC1-209ENST00000463300 RNF216Q9NWF9 866 aaPredicted RBP16.28■□□□□ 0.2
CLHC1-209ENST00000463300 SLC4A1APQ9BWU0 796 aaKnown RBP16.2■□□□□ 0.18
CLHC1-209ENST00000463300 HOXD11P31277 338 aaPredicted RBP16.16■□□□□ 0.18
CLHC1-209ENST00000463300 DNAJC5BQ9UF47 199 aa16.1■□□□□ 0.17
CLHC1-209ENST00000463300 EHMT2Q96KQ7 1210 aa15.92■□□□□ 0.14
CLHC1-209ENST00000463300 CSRNP3Q8WYN3 585 aa15.71■□□□□ 0.11
CLHC1-209ENST00000463300 DCAF8L1A6NGE4 600 aa15.62■□□□□ 0.09
CLHC1-209ENST00000463300 ZBTB22O15209 634 aa15.6■□□□□ 0.09
CLHC1-209ENST00000463300 FOXD4L1Q9NU39 408 aa15.58■□□□□ 0.08
CLHC1-209ENST00000463300 SLC4A2P04920 1241 aa15.54■□□□□ 0.08
CLHC1-209ENST00000463300 POTEDQ86YR6 584 aa15.51■□□□□ 0.07
CLHC1-209ENST00000463300 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.37■□□□□ 0.05
CLHC1-209ENST00000463300 MYCNP04198 464 aaPredicted RBP15.27■□□□□ 0.04
CLHC1-209ENST00000463300 U3KPZ7 1027 aaPredicted RBP15.14■□□□□ 0.01
CLHC1-209ENST00000463300 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.08■□□□□ 0
CLHC1-209ENST00000463300 HNRNPUL2Q1KMD3 747 aaKnown RBP15.08■□□□□ 0
CLHC1-209ENST00000463300 ATXN8OSP0DMR3 200 aa15.06■□□□□ 0
CLHC1-209ENST00000463300 SAMD1Q6SPF0 538 aaPredicted RBP15.01□□□□□ -0.01
CLHC1-209ENST00000463300 RNF39Q9H2S5 420 aa14.97□□□□□ -0.01
CLHC1-209ENST00000463300 APLP2Q06481 763 aa14.87□□□□□ -0.03
CLHC1-209ENST00000463300 C1QBPQ07021 282 aaKnown RBP14.84□□□□□ -0.03
CLHC1-209ENST00000463300 ATF5Q9Y2D1 282 aaPredicted RBP14.81□□□□□ -0.04
CLHC1-209ENST00000463300 SPINK5Q9NQ38 1064 aaPredicted RBP14.64□□□□□ -0.07
CLHC1-209ENST00000463300 ZNF219Q9P2Y4 722 aaPredicted RBP14.6□□□□□ -0.07
CLHC1-209ENST00000463300 CAPN15O75808 1086 aa14.57□□□□□ -0.08
CLHC1-209ENST00000463300 TRHP20396 242 aaPredicted RBP14.55□□□□□ -0.08
CLHC1-209ENST00000463300 CACNB1Q02641 598 aaPredicted RBP14.41□□□□□ -0.1
CLHC1-209ENST00000463300 POLA2Q14181 598 aa14.38□□□□□ -0.11
CLHC1-209ENST00000463300 DSG3P32926 999 aa14.31□□□□□ -0.12
CLHC1-209ENST00000463300 ABCB7O75027 752 aa14.29□□□□□ -0.12
CLHC1-209ENST00000463300 FBLN2P98095 1184 aa14.21□□□□□ -0.13
CLHC1-209ENST00000463300 ZBTB12Q9Y330 459 aaPredicted RBP14.2□□□□□ -0.14
CLHC1-209ENST00000463300 MKRN4PQ13434 485 aaPredicted RBP14.19□□□□□ -0.14
CLHC1-209ENST00000463300 FKBP8Q14318 412 aa14.16□□□□□ -0.14
CLHC1-209ENST00000463300 SPDYE4A6NLX3 237 aa13.98□□□□□ -0.17
CLHC1-209ENST00000463300 OSCARQ8IYS5 282 aa13.86□□□□□ -0.19
CLHC1-209ENST00000463300 SPDYE2BA6NHP3 402 aa13.83□□□□□ -0.2
CLHC1-209ENST00000463300 SPDYE6P0CI01 402 aa13.83□□□□□ -0.2
CLHC1-209ENST00000463300 SPDYE2Q495Y8 402 aa13.83□□□□□ -0.2
CLHC1-209ENST00000463300 PROM2Q8N271 834 aa13.81□□□□□ -0.2
CLHC1-209ENST00000463300 ZNF692Q9BU19 519 aaPredicted RBP13.78□□□□□ -0.2
CLHC1-209ENST00000463300 SSUH2Q9Y2M2 353 aa13.74□□□□□ -0.21
CLHC1-209ENST00000463300 FBXO3Q9UK99 471 aa13.67□□□□□ -0.22
CLHC1-209ENST00000463300 RBM42Q9BTD8 480 aaKnown RBP13.66□□□□□ -0.22
CLHC1-209ENST00000463300 PABPN1Q86U42 306 aaKnown RBP eCLIP13.59□□□□□ -0.23
CLHC1-209ENST00000463300 AKT1S1Q96B36 256 aa13.53□□□□□ -0.24
CLHC1-209ENST00000463300 STAG3Q9UJ98 1225 aa13.46□□□□□ -0.25
CLHC1-209ENST00000463300 VASPP50552 380 aaPredicted RBP13.43□□□□□ -0.26
CLHC1-209ENST00000463300 REM2Q8IYK8 340 aaPredicted RBP13.38□□□□□ -0.27
CLHC1-209ENST00000463300 SPDYE1Q8NFV5 336 aaPredicted RBP13.37□□□□□ -0.27
CLHC1-209ENST00000463300 AMER1Q5JTC6 1135 aaPredicted RBP13.3□□□□□ -0.28
CLHC1-209ENST00000463300 IFNLR1Q8IU57 520 aaPredicted RBP13.26□□□□□ -0.29
CLHC1-209ENST00000463300 CLEC11AQ9Y240 323 aa13.25□□□□□ -0.29
CLHC1-209ENST00000463300 MIER1Q8N108 512 aa13.23□□□□□ -0.29
CLHC1-209ENST00000463300 PLCD3Q8N3E9 789 aa13.23□□□□□ -0.29
CLHC1-209ENST00000463300 RTN4Q9NQC3 1192 aaKnown RBP13.22□□□□□ -0.29
CLHC1-209ENST00000463300 PITPNM1O00562 1244 aa13.2□□□□□ -0.3
CLHC1-209ENST00000463300 PRR29P0C7W0 189 aa13.19□□□□□ -0.3
CLHC1-209ENST00000463300 PLEKHG5O94827 1062 aa13.18□□□□□ -0.3
CLHC1-209ENST00000463300 KLHL34Q8N239 644 aa13.15□□□□□ -0.3
CLHC1-209ENST00000463300 ZBTB47Q9UFB7 747 aaPredicted RBP13.12□□□□□ -0.31
CLHC1-209ENST00000463300 SPOCK2Q92563 424 aa13.09□□□□□ -0.31
CLHC1-209ENST00000463300 CREBZFQ9NS37 354 aa13.07□□□□□ -0.32
CLHC1-209ENST00000463300 SLC24A1O60721 1099 aa13□□□□□ -0.33
CLHC1-209ENST00000463300 MNX1P50219 401 aaPredicted RBP12.97□□□□□ -0.33
CLHC1-209ENST00000463300 CHRDL2Q6WN34 429 aa12.97□□□□□ -0.33
CLHC1-209ENST00000463300 FXR2P51116 673 aaKnown RBP eCLIP12.95□□□□□ -0.34
CLHC1-209ENST00000463300 PKD2Q13563 968 aa12.9□□□□□ -0.34
CLHC1-209ENST00000463300 NUBP1P53384 320 aa12.89□□□□□ -0.35
CLHC1-209ENST00000463300 CHADLQ6NUI6 762 aa12.89□□□□□ -0.35
CLHC1-209ENST00000463300 NPM1P06748 294 aaKnown RBP eCLIP12.88□□□□□ -0.35
CLHC1-209ENST00000463300 PRKAR2AP13861 404 aaKnown RBP12.88□□□□□ -0.35
CLHC1-209ENST00000463300 PIP4P2Q8N4L2 257 aa12.86□□□□□ -0.35
CLHC1-209ENST00000463300 FARP1Q9Y4F1 1045 aaPredicted RBP12.84□□□□□ -0.35
CLHC1-209ENST00000463300 GSE1Q14687 1217 aa12.82□□□□□ -0.36
CLHC1-209ENST00000463300 CIZ1Q9ULV3 898 aaPredicted RBP12.81□□□□□ -0.36
CLHC1-209ENST00000463300 ECM2O94769 699 aaPredicted RBP12.77□□□□□ -0.37
CLHC1-209ENST00000463300 TRIM41Q8WV44 630 aa12.77□□□□□ -0.37
CLHC1-209ENST00000463300 FAM212AQ96EL1 285 aa12.77□□□□□ -0.37
CLHC1-209ENST00000463300 DCAF8Q5TAQ9 597 aa12.76□□□□□ -0.37
CLHC1-209ENST00000463300 RASEFQ8IZ41 740 aa12.76□□□□□ -0.37
CLHC1-209ENST00000463300 RGL2O15211 777 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms