RNA–Protein interactions for RNA: ENST00000405640.1

RTL10-202, Transcript of retrotransposon Gag like 10, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTL10, Length 6,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL10-202ENST00000405640 DCAF8L2P0C7V8 631 aa22.37■■□□□ 1.17
RTL10-202ENST00000405640 SUPT5HO00267 1087 aaKnown RBP21.29■■□□□ 1
RTL10-202ENST00000405640 EHMT2Q96KQ7 1210 aa21.2■□□□□ 0.98
RTL10-202ENST00000405640 SHROOM4Q9ULL8 1493 aa20.92■□□□□ 0.94
RTL10-202ENST00000405640 PELP1Q8IZL8 1130 aaKnown RBP20.54■□□□□ 0.88
RTL10-202ENST00000405640 TTBK1Q5TCY1 1321 aaPredicted RBP20.47■□□□□ 0.87
RTL10-202ENST00000405640 FAM9AQ8IZU1 332 aaPredicted RBP20.24■□□□□ 0.83
RTL10-202ENST00000405640 APLP2Q06481 763 aa20.23■□□□□ 0.83
RTL10-202ENST00000405640 NISCHQ9Y2I1 1504 aa20.21■□□□□ 0.83
RTL10-202ENST00000405640 PCGF6Q9BYE7 350 aa20.14■□□□□ 0.81
RTL10-202ENST00000405640 RANGAP1P46060 587 aaPredicted RBP20.07■□□□□ 0.8
RTL10-202ENST00000405640 ERICH6Q7L0X2 663 aa20.04■□□□□ 0.8
RTL10-202ENST00000405640 ATP1B4Q9UN42 357 aaPredicted RBP19.79■□□□□ 0.76
RTL10-202ENST00000405640 CCER1Q8TC90 406 aaPredicted RBP19.77■□□□□ 0.76
RTL10-202ENST00000405640 CENPBP07199 599 aaPredicted RBP19.77■□□□□ 0.75
RTL10-202ENST00000405640 YTHDC1Q96MU7 727 aaKnown RBP19.77■□□□□ 0.75
RTL10-202ENST00000405640 PPARGC1BQ86YN6 1023 aaKnown RBP19.56■□□□□ 0.72
RTL10-202ENST00000405640 TRIM41Q8WV44 630 aa19.51■□□□□ 0.71
RTL10-202ENST00000405640 ZEB1P37275 1124 aaPredicted RBP19.49■□□□□ 0.71
RTL10-202ENST00000405640 NEFLP07196 543 aa19.44■□□□□ 0.7
RTL10-202ENST00000405640 UBTFP17480 764 aaKnown RBP19.43■□□□□ 0.7
RTL10-202ENST00000405640 MYT1Q01538 1121 aa19.41■□□□□ 0.7
RTL10-202ENST00000405640 POLR3GLQ9BT43 218 aa19.18■□□□□ 0.66
RTL10-202ENST00000405640 CNGB1Q14028 1251 aaPredicted RBP19.17■□□□□ 0.66
RTL10-202ENST00000405640 ITGAEP38570 1179 aa19.12■□□□□ 0.65
RTL10-202ENST00000405640 DAXXQ9UER7 740 aaPredicted RBP19.03■□□□□ 0.64
RTL10-202ENST00000405640 MYT1LQ9UL68 1186 aa18.97■□□□□ 0.63
RTL10-202ENST00000405640 TRIM26Q12899 539 aaPredicted RBP18.95■□□□□ 0.62
RTL10-202ENST00000405640 CHIC1Q5VXU3 224 aa18.93■□□□□ 0.62
RTL10-202ENST00000405640 HRCP23327 699 aa18.92■□□□□ 0.62
RTL10-202ENST00000405640 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.88■□□□□ 0.61
RTL10-202ENST00000405640 HNRNPUL2Q1KMD3 747 aaKnown RBP18.88■□□□□ 0.61
RTL10-202ENST00000405640 LOC105371045A0A1W2PR82 267 aa18.87■□□□□ 0.61
RTL10-202ENST00000405640 SLC4A1APQ9BWU0 796 aaKnown RBP18.79■□□□□ 0.6
RTL10-202ENST00000405640 ZNF316A6NFI3 1004 aaPredicted RBP18.64■□□□□ 0.57
RTL10-202ENST00000405640 CLSPNQ9HAW4 1339 aa18.6■□□□□ 0.57
RTL10-202ENST00000405640 BCANQ96GW7 911 aa18.59■□□□□ 0.57
RTL10-202ENST00000405640 RTL5Q5HYW3 569 aaPredicted RBP18.56■□□□□ 0.56
RTL10-202ENST00000405640 DIEXFQ68CQ4 756 aaKnown RBP18.56■□□□□ 0.56
RTL10-202ENST00000405640 FAM50AQ14320 339 aaKnown RBP18.46■□□□□ 0.55
RTL10-202ENST00000405640 NEUROD1Q13562 356 aa18.45■□□□□ 0.54
RTL10-202ENST00000405640 BCL11AQ9H165 835 aa18.4■□□□□ 0.54
RTL10-202ENST00000405640 TRIM52Q96A61 297 aa18.38■□□□□ 0.53
RTL10-202ENST00000405640 GTF3C3Q9Y5Q9 886 aa18.35■□□□□ 0.53
RTL10-202ENST00000405640 ZNF326Q5BKZ1 582 aaKnown RBP18.3■□□□□ 0.52
RTL10-202ENST00000405640 SLC24A1O60721 1099 aa18.21■□□□□ 0.51
RTL10-202ENST00000405640 CDK11AQ9UQ88 783 aaPredicted RBP18.18■□□□□ 0.5
RTL10-202ENST00000405640 ANP32CO43423 234 aa18.15■□□□□ 0.5
RTL10-202ENST00000405640 CANXP27824 592 aaKnown RBP18.09■□□□□ 0.49
RTL10-202ENST00000405640 ZBTB47Q9UFB7 747 aaPredicted RBP18.08■□□□□ 0.49
RTL10-202ENST00000405640 NPM2Q86SE8 214 aaKnown RBP18.07■□□□□ 0.48
RTL10-202ENST00000405640 ARID3CA6NKF2 412 aa18.03■□□□□ 0.48
RTL10-202ENST00000405640 PABPN1Q86U42 306 aaKnown RBP eCLIP18■□□□□ 0.47
RTL10-202ENST00000405640 FBLN2P98095 1184 aa17.96■□□□□ 0.46
RTL10-202ENST00000405640 P3H3Q8IVL6 736 aa17.94■□□□□ 0.46
RTL10-202ENST00000405640 ANP32AP39687 249 aaKnown RBP17.88■□□□□ 0.45
RTL10-202ENST00000405640 ACIN1Q9UKV3 1341 aaKnown RBP17.87■□□□□ 0.45
RTL10-202ENST00000405640 EIF5BO60841 1220 aaKnown RBP17.85■□□□□ 0.45
RTL10-202ENST00000405640 PLPPR3Q6T4P5 718 aa17.82■□□□□ 0.44
RTL10-202ENST00000405640 FKBP8Q14318 412 aa17.82■□□□□ 0.44
RTL10-202ENST00000405640 ZNF777Q9ULD5 760 aaPredicted RBP17.79■□□□□ 0.44
RTL10-202ENST00000405640 SALL2Q9Y467 1007 aaPredicted RBP17.77■□□□□ 0.44
RTL10-202ENST00000405640 NEFMP07197 916 aa17.77■□□□□ 0.44
RTL10-202ENST00000405640 ABCC9O60706 1549 aa17.76■□□□□ 0.43
RTL10-202ENST00000405640 ARXQ96QS3 562 aa17.75■□□□□ 0.43
RTL10-202ENST00000405640 NBR1Q14596 966 aa17.73■□□□□ 0.43
RTL10-202ENST00000405640 FAM9BQ8IZU0 186 aa17.69■□□□□ 0.42
RTL10-202ENST00000405640 HSP90AA1P07900 732 aaKnown RBP17.68■□□□□ 0.42
RTL10-202ENST00000405640 HNRNPUQ00839 825 aaKnown RBP eCLIP17.64■□□□□ 0.416e-7■■□□□ 12.2
RTL10-202ENST00000405640 CHGAP10645 457 aaKnown RBP17.63■□□□□ 0.41
RTL10-202ENST00000405640 ANP32BQ92688 251 aaKnown RBP17.61■□□□□ 0.41
RTL10-202ENST00000405640 DDX10Q13206 875 aaKnown RBP17.61■□□□□ 0.41
RTL10-202ENST00000405640 IRX6P78412 446 aaPredicted RBP17.59■□□□□ 0.41
RTL10-202ENST00000405640 SENP3Q9H4L4 574 aaPredicted RBP17.52■□□□□ 0.39
RTL10-202ENST00000405640 TONSLQ96HA7 1378 aa17.52■□□□□ 0.39
RTL10-202ENST00000405640 UPF2Q9HAU5 1272 aaKnown RBP17.5■□□□□ 0.39
RTL10-202ENST00000405640 STAG3Q9UJ98 1225 aa17.49■□□□□ 0.39
RTL10-202ENST00000405640 HIRIP3Q9BW71 556 aaPredicted RBP17.48■□□□□ 0.39
RTL10-202ENST00000405640 CHIC2Q9UKJ5 165 aa17.46■□□□□ 0.39
RTL10-202ENST00000405640 CCDC136Q96JN2 1154 aa17.46■□□□□ 0.39
RTL10-202ENST00000405640 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.46■□□□□ 0.39
RTL10-202ENST00000405640 CSRNP3Q8WYN3 585 aa17.45■□□□□ 0.38
RTL10-202ENST00000405640 SENP3-EIF4A1A0A087X0R7 540 aa17.44■□□□□ 0.38
RTL10-202ENST00000405640 KDM2AQ9Y2K7 1162 aa17.41■□□□□ 0.38
RTL10-202ENST00000405640 PLEKHG5O94827 1062 aa17.41■□□□□ 0.38
RTL10-202ENST00000405640 ESF1Q9H501 851 aaKnown RBP17.41■□□□□ 0.38
RTL10-202ENST00000405640 TMC1Q8TDI8 760 aa17.4■□□□□ 0.38
RTL10-202ENST00000405640 SCAF1Q9H7N4 1312 aaKnown RBP17.38■□□□□ 0.37
RTL10-202ENST00000405640 WDR43Q15061 677 aaKnown RBP eCLIP17.35■□□□□ 0.373e-6■■■■□ 21.3
RTL10-202ENST00000405640 MIER1Q8N108 512 aa17.33■□□□□ 0.36
RTL10-202ENST00000405640 ZBTB7CA1YPR0 619 aa17.33■□□□□ 0.36
RTL10-202ENST00000405640 GLIPR1L2Q4G1C9 344 aa17.32■□□□□ 0.36
RTL10-202ENST00000405640 MRS2Q9HD23 443 aa17.32■□□□□ 0.36
RTL10-202ENST00000405640 SCRIBQ14160 1630 aa17.32■□□□□ 0.36
RTL10-202ENST00000405640 A0A0G2JS52 829 aa17.32■□□□□ 0.36
RTL10-202ENST00000405640 TPRNQ4KMQ1 711 aa17.31■□□□□ 0.36
RTL10-202ENST00000405640 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.3■□□□□ 0.36
RTL10-202ENST00000405640 MYH16Q9H6N6 1097 aa17.17■□□□□ 0.34
RTL10-202ENST00000405640 NCLP19338 710 aaKnown RBP17.16■□□□□ 0.34
RTL10-202ENST00000405640 C14orf37Q86TY3 774 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms