RNA–Protein interactions for RNA: ENST00000405640.1

RTL10-202, Transcript of retrotransposon Gag like 10, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTL10, Length 6,785 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL10-202ENST00000405640 DCAF8L2P0C7V8 631 aa22.37■■□□□ 1.17
RTL10-202ENST00000405640 SUPT5HO00267 1087 aaKnown RBP21.29■■□□□ 1
RTL10-202ENST00000405640 EHMT2Q96KQ7 1210 aa21.2■□□□□ 0.98
RTL10-202ENST00000405640 SHROOM4Q9ULL8 1493 aa20.92■□□□□ 0.94
RTL10-202ENST00000405640 PELP1Q8IZL8 1130 aaKnown RBP20.54■□□□□ 0.88
RTL10-202ENST00000405640 TTBK1Q5TCY1 1321 aaPredicted RBP20.47■□□□□ 0.87
RTL10-202ENST00000405640 FAM9AQ8IZU1 332 aaPredicted RBP20.24■□□□□ 0.83
RTL10-202ENST00000405640 APLP2Q06481 763 aa20.23■□□□□ 0.83
RTL10-202ENST00000405640 NISCHQ9Y2I1 1504 aa20.21■□□□□ 0.83
RTL10-202ENST00000405640 PCGF6Q9BYE7 350 aa20.14■□□□□ 0.81
RTL10-202ENST00000405640 RANGAP1P46060 587 aaPredicted RBP20.07■□□□□ 0.8
RTL10-202ENST00000405640 ERICH6Q7L0X2 663 aa20.04■□□□□ 0.8
RTL10-202ENST00000405640 ATP1B4Q9UN42 357 aaPredicted RBP19.79■□□□□ 0.76
RTL10-202ENST00000405640 CCER1Q8TC90 406 aaPredicted RBP19.77■□□□□ 0.76
RTL10-202ENST00000405640 CENPBP07199 599 aaPredicted RBP19.77■□□□□ 0.75
RTL10-202ENST00000405640 YTHDC1Q96MU7 727 aaKnown RBP19.77■□□□□ 0.75
RTL10-202ENST00000405640 PPARGC1BQ86YN6 1023 aaKnown RBP19.56■□□□□ 0.72
RTL10-202ENST00000405640 TRIM41Q8WV44 630 aa19.51■□□□□ 0.71
RTL10-202ENST00000405640 ZEB1P37275 1124 aaPredicted RBP19.49■□□□□ 0.71
RTL10-202ENST00000405640 NEFLP07196 543 aa19.44■□□□□ 0.7
RTL10-202ENST00000405640 UBTFP17480 764 aaKnown RBP19.43■□□□□ 0.7
RTL10-202ENST00000405640 MYT1Q01538 1121 aa19.41■□□□□ 0.7
RTL10-202ENST00000405640 POLR3GLQ9BT43 218 aa19.18■□□□□ 0.66
RTL10-202ENST00000405640 CNGB1Q14028 1251 aaPredicted RBP19.17■□□□□ 0.66
RTL10-202ENST00000405640 ITGAEP38570 1179 aa19.12■□□□□ 0.65
RTL10-202ENST00000405640 DAXXQ9UER7 740 aaPredicted RBP19.03■□□□□ 0.64
RTL10-202ENST00000405640 MYT1LQ9UL68 1186 aa18.97■□□□□ 0.63
RTL10-202ENST00000405640 TRIM26Q12899 539 aaPredicted RBP18.95■□□□□ 0.62
RTL10-202ENST00000405640 CHIC1Q5VXU3 224 aa18.93■□□□□ 0.62
RTL10-202ENST00000405640 HRCP23327 699 aa18.92■□□□□ 0.62
RTL10-202ENST00000405640 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.88■□□□□ 0.61
RTL10-202ENST00000405640 HNRNPUL2Q1KMD3 747 aaKnown RBP18.88■□□□□ 0.61
RTL10-202ENST00000405640 LOC105371045A0A1W2PR82 267 aa18.87■□□□□ 0.61
RTL10-202ENST00000405640 SLC4A1APQ9BWU0 796 aaKnown RBP18.79■□□□□ 0.6
RTL10-202ENST00000405640 ZNF316A6NFI3 1004 aaPredicted RBP18.64■□□□□ 0.57
RTL10-202ENST00000405640 CLSPNQ9HAW4 1339 aa18.6■□□□□ 0.57
RTL10-202ENST00000405640 BCANQ96GW7 911 aa18.59■□□□□ 0.57
RTL10-202ENST00000405640 RTL5Q5HYW3 569 aaPredicted RBP18.56■□□□□ 0.56
RTL10-202ENST00000405640 DIEXFQ68CQ4 756 aaKnown RBP18.56■□□□□ 0.56
RTL10-202ENST00000405640 FAM50AQ14320 339 aaKnown RBP18.46■□□□□ 0.55
RTL10-202ENST00000405640 NEUROD1Q13562 356 aa18.45■□□□□ 0.54
RTL10-202ENST00000405640 BCL11AQ9H165 835 aa18.4■□□□□ 0.54
RTL10-202ENST00000405640 TRIM52Q96A61 297 aa18.38■□□□□ 0.53
RTL10-202ENST00000405640 GTF3C3Q9Y5Q9 886 aa18.35■□□□□ 0.53
RTL10-202ENST00000405640 ZNF326Q5BKZ1 582 aaKnown RBP18.3■□□□□ 0.52
RTL10-202ENST00000405640 SLC24A1O60721 1099 aa18.21■□□□□ 0.51
RTL10-202ENST00000405640 CDK11AQ9UQ88 783 aaPredicted RBP18.18■□□□□ 0.5
RTL10-202ENST00000405640 ANP32CO43423 234 aa18.15■□□□□ 0.5
RTL10-202ENST00000405640 CANXP27824 592 aaKnown RBP18.09■□□□□ 0.49
RTL10-202ENST00000405640 ZBTB47Q9UFB7 747 aaPredicted RBP18.08■□□□□ 0.49
RTL10-202ENST00000405640 NPM2Q86SE8 214 aaKnown RBP18.07■□□□□ 0.48
RTL10-202ENST00000405640 ARID3CA6NKF2 412 aa18.03■□□□□ 0.48
RTL10-202ENST00000405640 PABPN1Q86U42 306 aaKnown RBP eCLIP18■□□□□ 0.47
RTL10-202ENST00000405640 FBLN2P98095 1184 aa17.96■□□□□ 0.46
RTL10-202ENST00000405640 P3H3Q8IVL6 736 aa17.94■□□□□ 0.46
RTL10-202ENST00000405640 ANP32AP39687 249 aaKnown RBP17.88■□□□□ 0.45
RTL10-202ENST00000405640 ACIN1Q9UKV3 1341 aaKnown RBP17.87■□□□□ 0.45
RTL10-202ENST00000405640 EIF5BO60841 1220 aaKnown RBP17.85■□□□□ 0.45
RTL10-202ENST00000405640 PLPPR3Q6T4P5 718 aa17.82■□□□□ 0.44
RTL10-202ENST00000405640 FKBP8Q14318 412 aa17.82■□□□□ 0.44
RTL10-202ENST00000405640 ZNF777Q9ULD5 760 aaPredicted RBP17.79■□□□□ 0.44
RTL10-202ENST00000405640 SALL2Q9Y467 1007 aaPredicted RBP17.77■□□□□ 0.44
RTL10-202ENST00000405640 NEFMP07197 916 aa17.77■□□□□ 0.44
RTL10-202ENST00000405640 ABCC9O60706 1549 aa17.76■□□□□ 0.43
RTL10-202ENST00000405640 ARXQ96QS3 562 aa17.75■□□□□ 0.43
RTL10-202ENST00000405640 NBR1Q14596 966 aa17.73■□□□□ 0.43
RTL10-202ENST00000405640 FAM9BQ8IZU0 186 aa17.69■□□□□ 0.42
RTL10-202ENST00000405640 HSP90AA1P07900 732 aaKnown RBP17.68■□□□□ 0.42
RTL10-202ENST00000405640 HNRNPUQ00839 825 aaKnown RBP eCLIP17.64■□□□□ 0.416e-7■■□□□ 12.2
RTL10-202ENST00000405640 CHGAP10645 457 aaKnown RBP17.63■□□□□ 0.41
RTL10-202ENST00000405640 ANP32BQ92688 251 aaKnown RBP17.61■□□□□ 0.41
RTL10-202ENST00000405640 DDX10Q13206 875 aaKnown RBP17.61■□□□□ 0.41
RTL10-202ENST00000405640 IRX6P78412 446 aaPredicted RBP17.59■□□□□ 0.41
RTL10-202ENST00000405640 SENP3Q9H4L4 574 aaPredicted RBP17.52■□□□□ 0.39
RTL10-202ENST00000405640 TONSLQ96HA7 1378 aa17.52■□□□□ 0.39
RTL10-202ENST00000405640 UPF2Q9HAU5 1272 aaKnown RBP17.5■□□□□ 0.39
RTL10-202ENST00000405640 STAG3Q9UJ98 1225 aa17.49■□□□□ 0.39
RTL10-202ENST00000405640 HIRIP3Q9BW71 556 aaPredicted RBP17.48■□□□□ 0.39
RTL10-202ENST00000405640 CHIC2Q9UKJ5 165 aa17.46■□□□□ 0.39
RTL10-202ENST00000405640 CCDC136Q96JN2 1154 aa17.46■□□□□ 0.39
RTL10-202ENST00000405640 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.46■□□□□ 0.39
RTL10-202ENST00000405640 CSRNP3Q8WYN3 585 aa17.45■□□□□ 0.38
RTL10-202ENST00000405640 SENP3-EIF4A1A0A087X0R7 540 aa17.44■□□□□ 0.38
RTL10-202ENST00000405640 KDM2AQ9Y2K7 1162 aa17.41■□□□□ 0.38
RTL10-202ENST00000405640 PLEKHG5O94827 1062 aa17.41■□□□□ 0.38
RTL10-202ENST00000405640 ESF1Q9H501 851 aaKnown RBP17.41■□□□□ 0.38
RTL10-202ENST00000405640 TMC1Q8TDI8 760 aa17.4■□□□□ 0.38
RTL10-202ENST00000405640 SCAF1Q9H7N4 1312 aaKnown RBP17.38■□□□□ 0.37
RTL10-202ENST00000405640 WDR43Q15061 677 aaKnown RBP eCLIP17.35■□□□□ 0.373e-6■■■■□ 21.3
RTL10-202ENST00000405640 MIER1Q8N108 512 aa17.33■□□□□ 0.36
RTL10-202ENST00000405640 ZBTB7CA1YPR0 619 aa17.33■□□□□ 0.36
RTL10-202ENST00000405640 GLIPR1L2Q4G1C9 344 aa17.32■□□□□ 0.36
RTL10-202ENST00000405640 MRS2Q9HD23 443 aa17.32■□□□□ 0.36
RTL10-202ENST00000405640 SCRIBQ14160 1630 aa17.32■□□□□ 0.36
RTL10-202ENST00000405640 A0A0G2JS52 829 aa17.32■□□□□ 0.36
RTL10-202ENST00000405640 TPRNQ4KMQ1 711 aa17.31■□□□□ 0.36
RTL10-202ENST00000405640 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.3■□□□□ 0.36
RTL10-202ENST00000405640 MYH16Q9H6N6 1097 aa17.17■□□□□ 0.34
RTL10-202ENST00000405640 NCLP19338 710 aaKnown RBP17.16■□□□□ 0.34
RTL10-202ENST00000405640 C14orf37Q86TY3 774 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms