RNA–Protein interactions for RNA: ENST00000425819.6

SCRN1-205, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-205ENST00000425819 NISCHQ9Y2I1 1504 aa36.65■■■■□ 3.46
SCRN1-205ENST00000425819 CCDC180Q9P1Z9 1646 aa32.12■■■□□ 2.73
SCRN1-205ENST00000425819 ABCC9O60706 1549 aa30.83■■■□□ 2.53
SCRN1-205ENST00000425819 ZCCHC6Q5VYS8 1495 aaKnown RBP30.7■■■□□ 2.5
SCRN1-205ENST00000425819 DCAF8L2P0C7V8 631 aa30.47■■■□□ 2.47
SCRN1-205ENST00000425819 DCAF1Q9Y4B6 1507 aa30.27■■■□□ 2.44
SCRN1-205ENST00000425819 MYO15BQ96JP2 1530 aa30.08■■■□□ 2.41
SCRN1-205ENST00000425819 NACADO15069 1562 aa30.04■■■□□ 2.4
SCRN1-205ENST00000425819 RB1CC1Q8TDY2 1594 aa29.9■■■□□ 2.38
SCRN1-205ENST00000425819 SHROOM4Q9ULL8 1493 aa29.66■■■□□ 2.34
SCRN1-205ENST00000425819 SCRIBQ14160 1630 aa29.53■■■□□ 2.32
SCRN1-205ENST00000425819 UNC13AQ9UPW8 1703 aa29.22■■■□□ 2.27
SCRN1-205ENST00000425819 PABPN1Q86U42 306 aaKnown RBP eCLIP29.01■■■□□ 2.24
SCRN1-205ENST00000425819 BICRAQ9NZM4 1560 aa28.99■■■□□ 2.23
SCRN1-205ENST00000425819 CECR2Q9BXF3 1484 aa28.53■■■□□ 2.16
SCRN1-205ENST00000425819 BAZ1AQ9NRL2 1556 aaPredicted RBP28.33■■■□□ 2.13
SCRN1-205ENST00000425819 MROH2BQ7Z745 1585 aa28.31■■■□□ 2.12
SCRN1-205ENST00000425819 SUPT5HO00267 1087 aaKnown RBP28.31■■■□□ 2.12
SCRN1-205ENST00000425819 RSF1Q96T23 1441 aaPredicted RBP28.28■■■□□ 2.12
SCRN1-205ENST00000425819 SMARCA4P51532 1647 aa28.25■■■□□ 2.11
SCRN1-205ENST00000425819 EIF4G1Q04637 1599 aaKnown RBP28.17■■■□□ 2.1
SCRN1-205ENST00000425819 WIZO95785 1651 aa28.04■■■□□ 2.08
SCRN1-205ENST00000425819 ATAD2BQ9ULI0 1458 aa27.92■■■□□ 2.06
SCRN1-205ENST00000425819 PEG3Q9GZU2 1588 aa27.9■■■□□ 2.06
SCRN1-205ENST00000425819 SMARCA2P51531 1590 aa27.88■■■□□ 2.05
SCRN1-205ENST00000425819 CC2D2AQ9P2K1 1620 aa27.86■■■□□ 2.05
SCRN1-205ENST00000425819 BAZ1BQ9UIG0 1483 aaKnown RBP27.75■■■□□ 2.03
SCRN1-205ENST00000425819 TOP2AP11388 1531 aaKnown RBP27.74■■■□□ 2.03
SCRN1-205ENST00000425819 NCAPD3P42695 1498 aa27.74■■■□□ 2.03
SCRN1-205ENST00000425819 HMGXB3Q12766 1538 aa27.65■■■□□ 2.02
SCRN1-205ENST00000425819 DNAJC5BQ9UF47 199 aa27.58■■■□□ 2.01
SCRN1-205ENST00000425819 CCDC88BA6NC98 1476 aa27.47■■□□□ 1.99
SCRN1-205ENST00000425819 CADPSQ9ULU8 1353 aa27.02■■□□□ 1.92
SCRN1-205ENST00000425819 CFTRP13569 1480 aa27.01■■□□□ 1.91
SCRN1-205ENST00000425819 NESP48681 1621 aa26.92■■□□□ 1.9
SCRN1-205ENST00000425819 LAMC3Q9Y6N6 1575 aa26.86■■□□□ 1.89
SCRN1-205ENST00000425819 CHIC1Q5VXU3 224 aa26.85■■□□□ 1.89
SCRN1-205ENST00000425819 PRDM2Q13029 1718 aa26.78■■□□□ 1.88
SCRN1-205ENST00000425819 ABCC8Q09428 1581 aa26.75■■□□□ 1.87
SCRN1-205ENST00000425819 FANCD2Q9BXW9 1451 aa26.72■■□□□ 1.87
SCRN1-205ENST00000425819 PDS5BQ9NTI5 1447 aa26.69■■□□□ 1.86
SCRN1-205ENST00000425819 TRIM41Q8WV44 630 aa26.64■■□□□ 1.86
SCRN1-205ENST00000425819 WRNQ14191 1432 aaPredicted RBP eCLIP26.64■■□□□ 1.86
SCRN1-205ENST00000425819 CEP164Q9UPV0 1460 aa26.59■■□□□ 1.85
SCRN1-205ENST00000425819 KIF21AQ7Z4S6 1674 aa26.55■■□□□ 1.84
SCRN1-205ENST00000425819 SYNJ1O43426 1573 aa26.53■■□□□ 1.84
SCRN1-205ENST00000425819 CUX1P39880 1505 aa26.5■■□□□ 1.83
SCRN1-205ENST00000425819 ERCC6Q03468 1493 aa26.49■■□□□ 1.83
SCRN1-205ENST00000425819 TOP2BQ02880 1626 aa26.44■■□□□ 1.82
SCRN1-205ENST00000425819 BIVM-ERCC5R4GMW8 1640 aa26.41■■□□□ 1.82
SCRN1-205ENST00000425819 URB2Q14146 1524 aaKnown RBP26.4■■□□□ 1.82
SCRN1-205ENST00000425819 DNMBPQ6XZF7 1577 aa26.38■■□□□ 1.81
SCRN1-205ENST00000425819 TOPBP1Q92547 1522 aa26.38■■□□□ 1.81
SCRN1-205ENST00000425819 MRC2Q9UBG0 1479 aa26.37■■□□□ 1.81
SCRN1-205ENST00000425819 FGD5Q6ZNL6 1462 aa26.28■■□□□ 1.8
SCRN1-205ENST00000425819 THOC2Q8NI27 1593 aaKnown RBP26.25■■□□□ 1.79
SCRN1-205ENST00000425819 WDR62O43379 1518 aa26.23■■□□□ 1.79
SCRN1-205ENST00000425819 POLA1P09884 1462 aaPredicted RBP26.21■■□□□ 1.79
SCRN1-205ENST00000425819 SOGA1O94964 1423 aa26.17■■□□□ 1.78
SCRN1-205ENST00000425819 FAM9AQ8IZU1 332 aaPredicted RBP26.16■■□□□ 1.78
SCRN1-205ENST00000425819 RAD54L2Q9Y4B4 1467 aa26.14■■□□□ 1.78
SCRN1-205ENST00000425819 RUSC2Q8N2Y8 1516 aa26.09■■□□□ 1.77
SCRN1-205ENST00000425819 CUX2O14529 1486 aa26.06■■□□□ 1.76
SCRN1-205ENST00000425819 ABCA10Q8WWZ4 1543 aa26.03■■□□□ 1.76
SCRN1-205ENST00000425819 EEA1Q15075 1411 aa26.01■■□□□ 1.75
SCRN1-205ENST00000425819 KIF27Q86VH2 1401 aa26■■□□□ 1.75
SCRN1-205ENST00000425819 TARBP1Q13395 1621 aaKnown RBP25.99■■□□□ 1.75
SCRN1-205ENST00000425819 IFT140Q96RY7 1462 aa25.98■■□□□ 1.75
SCRN1-205ENST00000425819 WDR97A6NE52 1622 aa25.95■■□□□ 1.74
SCRN1-205ENST00000425819 CSRNP3Q8WYN3 585 aa25.94■■□□□ 1.74
SCRN1-205ENST00000425819 TDRD9Q8NDG6 1382 aaKnown RBP25.93■■□□□ 1.74
SCRN1-205ENST00000425819 ZNF608Q9ULD9 1512 aaPredicted RBP25.87■■□□□ 1.73
SCRN1-205ENST00000425819 AQRO60306 1485 aaKnown RBP eCLIP25.84■■□□□ 1.73
SCRN1-205ENST00000425819 GAPVD1Q14C86 1478 aa25.84■■□□□ 1.73
SCRN1-205ENST00000425819 ABCA5Q8WWZ7 1642 aa25.83■■□□□ 1.73
SCRN1-205ENST00000425819 EHMT2Q96KQ7 1210 aa25.83■■□□□ 1.73
SCRN1-205ENST00000425819 LOC105371045A0A1W2PR82 267 aa25.82■■□□□ 1.72
SCRN1-205ENST00000425819 IGF1RP08069 1367 aa25.81■■□□□ 1.72
SCRN1-205ENST00000425819 EIF4G3O43432 1585 aaKnown RBP25.74■■□□□ 1.71
SCRN1-205ENST00000425819 ERICH3Q5RHP9 1530 aa25.71■■□□□ 1.71
SCRN1-205ENST00000425819 GRIN2BQ13224 1484 aa25.7■■□□□ 1.71
SCRN1-205ENST00000425819 PRXQ9BXM0 1461 aa25.7■■□□□ 1.71
SCRN1-205ENST00000425819 CARMIL1Q5VZK9 1371 aa25.69■■□□□ 1.7
SCRN1-205ENST00000425819 KIF21BO75037 1637 aa25.68■■□□□ 1.7
SCRN1-205ENST00000425819 PBRM1Q86U86 1689 aa25.68■■□□□ 1.7
SCRN1-205ENST00000425819 RAPGEF2Q9Y4G8 1499 aa25.65■■□□□ 1.7
SCRN1-205ENST00000425819 GOLGA3Q08378 1498 aa25.65■■□□□ 1.7
SCRN1-205ENST00000425819 CUL7Q14999 1698 aa25.62■■□□□ 1.69
SCRN1-205ENST00000425819 SNAPC4Q5SXM2 1469 aa25.59■■□□□ 1.69
SCRN1-205ENST00000425819 UBTFP17480 764 aaKnown RBP25.59■■□□□ 1.69
SCRN1-205ENST00000425819 FHAD1B1AJZ9 1412 aa25.55■■□□□ 1.68
SCRN1-205ENST00000425819 ADAMTS12P58397 1594 aa25.54■■□□□ 1.68
SCRN1-205ENST00000425819 MAGI1Q96QZ7 1491 aaPredicted RBP25.52■■□□□ 1.68
SCRN1-205ENST00000425819 TNIKQ9UKE5 1360 aa25.48■■□□□ 1.67
SCRN1-205ENST00000425819 SYNJ2O15056 1496 aa25.43■■□□□ 1.66
SCRN1-205ENST00000425819 FBLN2P98095 1184 aa25.43■■□□□ 1.66
SCRN1-205ENST00000425819 CHMP7Q8WUX9 453 aaPredicted RBP25.43■■□□□ 1.66
SCRN1-205ENST00000425819 GRIN2AQ12879 1464 aa25.38■■□□□ 1.65
SCRN1-205ENST00000425819 RANGAP1P46060 587 aaPredicted RBP25.34■■□□□ 1.65
SCRN1-205ENST00000425819 CEP162Q5TB80 1403 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms