RNA–Protein interactions for RNA: ENST00000328554.8

RTL10-201, Transcript of retrotransposon Gag like 10, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTL10, Length 6,619 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL10-201ENST00000328554 DCAF8L2P0C7V8 631 aa21.89■■□□□ 1.09
RTL10-201ENST00000328554 SUPT5HO00267 1087 aaKnown RBP20.83■□□□□ 0.92
RTL10-201ENST00000328554 EHMT2Q96KQ7 1210 aa20.65■□□□□ 0.9
RTL10-201ENST00000328554 SHROOM4Q9ULL8 1493 aa20.39■□□□□ 0.85
RTL10-201ENST00000328554 PELP1Q8IZL8 1130 aaKnown RBP20.1■□□□□ 0.81
RTL10-201ENST00000328554 TTBK1Q5TCY1 1321 aaPredicted RBP19.95■□□□□ 0.78
RTL10-201ENST00000328554 NISCHQ9Y2I1 1504 aa19.87■□□□□ 0.77
RTL10-201ENST00000328554 APLP2Q06481 763 aa19.81■□□□□ 0.76
RTL10-201ENST00000328554 FAM9AQ8IZU1 332 aaPredicted RBP19.79■□□□□ 0.76
RTL10-201ENST00000328554 PCGF6Q9BYE7 350 aa19.69■□□□□ 0.74
RTL10-201ENST00000328554 RANGAP1P46060 587 aaPredicted RBP19.58■□□□□ 0.72
RTL10-201ENST00000328554 ERICH6Q7L0X2 663 aa19.54■□□□□ 0.72
RTL10-201ENST00000328554 CENPBP07199 599 aaPredicted RBP19.34■□□□□ 0.69
RTL10-201ENST00000328554 ATP1B4Q9UN42 357 aaPredicted RBP19.32■□□□□ 0.68
RTL10-201ENST00000328554 CCER1Q8TC90 406 aaPredicted RBP19.32■□□□□ 0.68
RTL10-201ENST00000328554 YTHDC1Q96MU7 727 aaKnown RBP19.26■□□□□ 0.67
RTL10-201ENST00000328554 TRIM41Q8WV44 630 aa19.1■□□□□ 0.65
RTL10-201ENST00000328554 ZEB1P37275 1124 aaPredicted RBP19.09■□□□□ 0.65
RTL10-201ENST00000328554 PPARGC1BQ86YN6 1023 aaKnown RBP19.07■□□□□ 0.64
RTL10-201ENST00000328554 UBTFP17480 764 aaKnown RBP19.01■□□□□ 0.63
RTL10-201ENST00000328554 NEFLP07196 543 aa19.01■□□□□ 0.63
RTL10-201ENST00000328554 MYT1Q01538 1121 aa18.86■□□□□ 0.61
RTL10-201ENST00000328554 POLR3GLQ9BT43 218 aa18.72■□□□□ 0.59
RTL10-201ENST00000328554 CNGB1Q14028 1251 aaPredicted RBP18.69■□□□□ 0.58
RTL10-201ENST00000328554 ITGAEP38570 1179 aa18.68■□□□□ 0.58
RTL10-201ENST00000328554 DAXXQ9UER7 740 aaPredicted RBP18.59■□□□□ 0.57
RTL10-201ENST00000328554 TRIM26Q12899 539 aaPredicted RBP18.54■□□□□ 0.56
RTL10-201ENST00000328554 MYT1LQ9UL68 1186 aa18.54■□□□□ 0.56
RTL10-201ENST00000328554 HRCP23327 699 aa18.51■□□□□ 0.55
RTL10-201ENST00000328554 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.47■□□□□ 0.55
RTL10-201ENST00000328554 HNRNPUL2Q1KMD3 747 aaKnown RBP18.47■□□□□ 0.55
RTL10-201ENST00000328554 LOC105371045A0A1W2PR82 267 aa18.44■□□□□ 0.54
RTL10-201ENST00000328554 CHIC1Q5VXU3 224 aa18.44■□□□□ 0.54
RTL10-201ENST00000328554 SLC4A1APQ9BWU0 796 aaKnown RBP18.33■□□□□ 0.52
RTL10-201ENST00000328554 CLSPNQ9HAW4 1339 aa18.19■□□□□ 0.5
RTL10-201ENST00000328554 ZNF316A6NFI3 1004 aaPredicted RBP18.18■□□□□ 0.5
RTL10-201ENST00000328554 RTL5Q5HYW3 569 aaPredicted RBP18.14■□□□□ 0.49
RTL10-201ENST00000328554 DIEXFQ68CQ4 756 aaKnown RBP18.14■□□□□ 0.49
RTL10-201ENST00000328554 BCANQ96GW7 911 aa18.13■□□□□ 0.49
RTL10-201ENST00000328554 FAM50AQ14320 339 aaKnown RBP18.03■□□□□ 0.48
RTL10-201ENST00000328554 NEUROD1Q13562 356 aa18.02■□□□□ 0.47
RTL10-201ENST00000328554 TRIM52Q96A61 297 aa17.96■□□□□ 0.47
RTL10-201ENST00000328554 BCL11AQ9H165 835 aa17.93■□□□□ 0.46
RTL10-201ENST00000328554 PABPN1Q86U42 306 aaKnown RBP eCLIP17.92■□□□□ 0.46
RTL10-201ENST00000328554 GTF3C3Q9Y5Q9 886 aa17.92■□□□□ 0.46
RTL10-201ENST00000328554 ZNF326Q5BKZ1 582 aaKnown RBP17.88■□□□□ 0.45
RTL10-201ENST00000328554 ABCC9O60706 1549 aa17.84■□□□□ 0.45
RTL10-201ENST00000328554 CDK11AQ9UQ88 783 aaPredicted RBP17.76■□□□□ 0.43
RTL10-201ENST00000328554 SLC24A1O60721 1099 aa17.76■□□□□ 0.43
RTL10-201ENST00000328554 ANP32CO43423 234 aa17.75■□□□□ 0.43
RTL10-201ENST00000328554 ZBTB47Q9UFB7 747 aaPredicted RBP17.69■□□□□ 0.42
RTL10-201ENST00000328554 CANXP27824 592 aaKnown RBP17.67■□□□□ 0.42
RTL10-201ENST00000328554 NPM2Q86SE8 214 aaKnown RBP17.62■□□□□ 0.41
RTL10-201ENST00000328554 ARID3CA6NKF2 412 aa17.6■□□□□ 0.41
RTL10-201ENST00000328554 FBLN2P98095 1184 aa17.57■□□□□ 0.4
RTL10-201ENST00000328554 P3H3Q8IVL6 736 aa17.53■□□□□ 0.4
RTL10-201ENST00000328554 ACIN1Q9UKV3 1341 aaKnown RBP17.47■□□□□ 0.39
RTL10-201ENST00000328554 ANP32AP39687 249 aaKnown RBP17.47■□□□□ 0.39
RTL10-201ENST00000328554 EIF5BO60841 1220 aaKnown RBP17.43■□□□□ 0.38
RTL10-201ENST00000328554 NEFMP07197 916 aa17.4■□□□□ 0.38
RTL10-201ENST00000328554 FKBP8Q14318 412 aa17.4■□□□□ 0.38
RTL10-201ENST00000328554 ZNF777Q9ULD5 760 aaPredicted RBP17.4■□□□□ 0.38
RTL10-201ENST00000328554 SALL2Q9Y467 1007 aaPredicted RBP17.35■□□□□ 0.37
RTL10-201ENST00000328554 FAM9BQ8IZU0 186 aa17.29■□□□□ 0.36
RTL10-201ENST00000328554 PLPPR3Q6T4P5 718 aa17.28■□□□□ 0.36
RTL10-201ENST00000328554 HSP90AA1P07900 732 aaKnown RBP17.28■□□□□ 0.36
RTL10-201ENST00000328554 ARXQ96QS3 562 aa17.28■□□□□ 0.36
RTL10-201ENST00000328554 NBR1Q14596 966 aa17.27■□□□□ 0.35
RTL10-201ENST00000328554 HNRNPUQ00839 825 aaKnown RBP eCLIP17.25■□□□□ 0.356e-7■■□□□ 12.2
RTL10-201ENST00000328554 CHGAP10645 457 aaKnown RBP17.23■□□□□ 0.35
RTL10-201ENST00000328554 DDX10Q13206 875 aaKnown RBP17.22■□□□□ 0.35
RTL10-201ENST00000328554 ANP32BQ92688 251 aaKnown RBP17.22■□□□□ 0.35
RTL10-201ENST00000328554 IRX6P78412 446 aaPredicted RBP17.15■□□□□ 0.34
RTL10-201ENST00000328554 TONSLQ96HA7 1378 aa17.13■□□□□ 0.33
RTL10-201ENST00000328554 CSRNP3Q8WYN3 585 aa17.13■□□□□ 0.33
RTL10-201ENST00000328554 UPF2Q9HAU5 1272 aaKnown RBP17.12■□□□□ 0.33
RTL10-201ENST00000328554 STAG3Q9UJ98 1225 aa17.11■□□□□ 0.33
RTL10-201ENST00000328554 CCDC136Q96JN2 1154 aa17.08■□□□□ 0.33
RTL10-201ENST00000328554 CHIC2Q9UKJ5 165 aa17.07■□□□□ 0.32
RTL10-201ENST00000328554 HIRIP3Q9BW71 556 aaPredicted RBP17.07■□□□□ 0.32
RTL10-201ENST00000328554 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.06■□□□□ 0.32
RTL10-201ENST00000328554 SENP3Q9H4L4 574 aaPredicted RBP17.06■□□□□ 0.32
RTL10-201ENST00000328554 ESF1Q9H501 851 aaKnown RBP17.05■□□□□ 0.32
RTL10-201ENST00000328554 TMC1Q8TDI8 760 aa17.03■□□□□ 0.32
RTL10-201ENST00000328554 KDM2AQ9Y2K7 1162 aa17.02■□□□□ 0.31
RTL10-201ENST00000328554 SENP3-EIF4A1A0A087X0R7 540 aa17■□□□□ 0.31
RTL10-201ENST00000328554 PLEKHG5O94827 1062 aa16.97■□□□□ 0.31
RTL10-201ENST00000328554 WDR43Q15061 677 aaKnown RBP eCLIP16.96■□□□□ 0.313e-6■■■■□ 21.3
RTL10-201ENST00000328554 MRS2Q9HD23 443 aa16.96■□□□□ 0.31
RTL10-201ENST00000328554 SCAF1Q9H7N4 1312 aaKnown RBP16.95■□□□□ 0.3
RTL10-201ENST00000328554 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.95■□□□□ 0.3
RTL10-201ENST00000328554 MIER1Q8N108 512 aa16.94■□□□□ 0.3
RTL10-201ENST00000328554 GLIPR1L2Q4G1C9 344 aa16.92■□□□□ 0.3
RTL10-201ENST00000328554 SCRIBQ14160 1630 aa16.9■□□□□ 0.3
RTL10-201ENST00000328554 A0A0G2JS52 829 aa16.9■□□□□ 0.3
RTL10-201ENST00000328554 ZBTB7CA1YPR0 619 aa16.89■□□□□ 0.29
RTL10-201ENST00000328554 TPRNQ4KMQ1 711 aa16.84■□□□□ 0.29
RTL10-201ENST00000328554 MYH16Q9H6N6 1097 aa16.79■□□□□ 0.28
RTL10-201ENST00000328554 NPM1P06748 294 aaKnown RBP eCLIP16.76■□□□□ 0.27
RTL10-201ENST00000328554 C14orf37Q86TY3 774 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms