RNA–Protein interactions for RNA: ENST00000578649.1

UBB-207, Transcript of ubiquitin B, humanhuman

TSL 5

Gene UBB, Length 477 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-207ENST00000578649 NISCHQ9Y2I1 1504 aa32.01■■■□□ 2.72
UBB-207ENST00000578649 CCDC180Q9P1Z9 1646 aa28.61■■■□□ 2.17
UBB-207ENST00000578649 ABCC9O60706 1549 aa28.53■■■□□ 2.16
UBB-207ENST00000578649 RB1CC1Q8TDY2 1594 aa27.18■■□□□ 1.94
UBB-207ENST00000578649 NACADO15069 1562 aa27.03■■□□□ 1.92
UBB-207ENST00000578649 DCAF8L2P0C7V8 631 aa27■■□□□ 1.91
UBB-207ENST00000578649 MYO15BQ96JP2 1530 aa26.7■■□□□ 1.87
UBB-207ENST00000578649 DNAJC5BQ9UF47 199 aa26.69■■□□□ 1.86
UBB-207ENST00000578649 PABPN1Q86U42 306 aaKnown RBP eCLIP26.62■■□□□ 1.85
UBB-207ENST00000578649 UNC13AQ9UPW8 1703 aa26.56■■□□□ 1.84
UBB-207ENST00000578649 ZCCHC6Q5VYS8 1495 aaKnown RBP26.55■■□□□ 1.84
UBB-207ENST00000578649 DCAF1Q9Y4B6 1507 aa26.43■■□□□ 1.82
UBB-207ENST00000578649 BICRAQ9NZM4 1560 aa26.42■■□□□ 1.82
UBB-207ENST00000578649 SCRIBQ14160 1630 aa26.12■■□□□ 1.77
UBB-207ENST00000578649 SHROOM4Q9ULL8 1493 aa26.02■■□□□ 1.76
UBB-207ENST00000578649 CC2D2AQ9P2K1 1620 aa25.77■■□□□ 1.72
UBB-207ENST00000578649 EIF4G1Q04637 1599 aaKnown RBP25.74■■□□□ 1.71
UBB-207ENST00000578649 CECR2Q9BXF3 1484 aa25.67■■□□□ 1.7
UBB-207ENST00000578649 NCAPD3P42695 1498 aa24.98■■□□□ 1.59
UBB-207ENST00000578649 AEBP2Q6ZN18 517 aaPredicted RBP24.94■■□□□ 1.58
UBB-207ENST00000578649 ATAD2BQ9ULI0 1458 aa24.93■■□□□ 1.58
UBB-207ENST00000578649 SMARCA4P51532 1647 aa24.93■■□□□ 1.58
UBB-207ENST00000578649 SMARCA2P51531 1590 aa24.84■■□□□ 1.57
UBB-207ENST00000578649 BAZ1AQ9NRL2 1556 aaPredicted RBP24.82■■□□□ 1.56
UBB-207ENST00000578649 HMGXB3Q12766 1538 aa24.78■■□□□ 1.56
UBB-207ENST00000578649 MROH2BQ7Z745 1585 aa24.69■■□□□ 1.54
UBB-207ENST00000578649 BAZ1BQ9UIG0 1483 aaKnown RBP24.69■■□□□ 1.54
UBB-207ENST00000578649 PEG3Q9GZU2 1588 aa24.67■■□□□ 1.54
UBB-207ENST00000578649 ERCC6Q03468 1493 aa24.6■■□□□ 1.53
UBB-207ENST00000578649 NESP48681 1621 aa24.57■■□□□ 1.52
UBB-207ENST00000578649 CUX2O14529 1486 aa24.49■■□□□ 1.51
UBB-207ENST00000578649 WIZO95785 1651 aa24.39■■□□□ 1.49
UBB-207ENST00000578649 LAMC3Q9Y6N6 1575 aa24.37■■□□□ 1.49
UBB-207ENST00000578649 DNAJC5Q9H3Z4 198 aa24.36■■□□□ 1.49
UBB-207ENST00000578649 THOC2Q8NI27 1593 aaKnown RBP24.25■■□□□ 1.47
UBB-207ENST00000578649 CADPSQ9ULU8 1353 aa24.24■■□□□ 1.47
UBB-207ENST00000578649 RSF1Q96T23 1441 aaPredicted RBP24.24■■□□□ 1.47
UBB-207ENST00000578649 PDS5BQ9NTI5 1447 aa24.24■■□□□ 1.47
UBB-207ENST00000578649 KIF21AQ7Z4S6 1674 aa24.21■■□□□ 1.47
UBB-207ENST00000578649 TOP2AP11388 1531 aaKnown RBP24.07■■□□□ 1.44
UBB-207ENST00000578649 MRC2Q9UBG0 1479 aa24.02■■□□□ 1.44
UBB-207ENST00000578649 CFTRP13569 1480 aa23.99■■□□□ 1.43
UBB-207ENST00000578649 FANCD2Q9BXW9 1451 aa23.96■■□□□ 1.43
UBB-207ENST00000578649 WDR62O43379 1518 aa23.95■■□□□ 1.43
UBB-207ENST00000578649 CEP164Q9UPV0 1460 aa23.95■■□□□ 1.42
UBB-207ENST00000578649 CCDC88BA6NC98 1476 aa23.83■■□□□ 1.41
UBB-207ENST00000578649 URB2Q14146 1524 aaKnown RBP23.76■■□□□ 1.39
UBB-207ENST00000578649 PRDM2Q13029 1718 aa23.69■■□□□ 1.38
UBB-207ENST00000578649 TOPBP1Q92547 1522 aa23.52■■□□□ 1.36
UBB-207ENST00000578649 IFT140Q96RY7 1462 aa23.47■■□□□ 1.35
UBB-207ENST00000578649 ZNF608Q9ULD9 1512 aaPredicted RBP23.46■■□□□ 1.35
UBB-207ENST00000578649 ABCC8Q09428 1581 aa23.44■■□□□ 1.34
UBB-207ENST00000578649 OSCARQ8IYS5 282 aa23.44■■□□□ 1.34
UBB-207ENST00000578649 DNMBPQ6XZF7 1577 aa23.43■■□□□ 1.34
UBB-207ENST00000578649 CHIC1Q5VXU3 224 aa23.4■■□□□ 1.34
UBB-207ENST00000578649 TRIM41Q8WV44 630 aa23.36■■□□□ 1.33
UBB-207ENST00000578649 SUPT5HO00267 1087 aaKnown RBP23.3■■□□□ 1.32
UBB-207ENST00000578649 EIF4G3O43432 1585 aaKnown RBP23.3■■□□□ 1.32
UBB-207ENST00000578649 POLA1P09884 1462 aaPredicted RBP23.3■■□□□ 1.32
UBB-207ENST00000578649 TARBP1Q13395 1621 aaKnown RBP23.3■■□□□ 1.32
UBB-207ENST00000578649 AQRO60306 1485 aaKnown RBP eCLIP23.27■■□□□ 1.323e-9■■□□□ 14.5
UBB-207ENST00000578649 RAD54L2Q9Y4B4 1467 aa23.23■■□□□ 1.31
UBB-207ENST00000578649 SOGA1O94964 1423 aa23.19■■□□□ 1.3
UBB-207ENST00000578649 CUX1P39880 1505 aa23.18■■□□□ 1.3
UBB-207ENST00000578649 FGD5Q6ZNL6 1462 aa23.17■■□□□ 1.3
UBB-207ENST00000578649 TDRD9Q8NDG6 1382 aaKnown RBP23.15■■□□□ 1.3
UBB-207ENST00000578649 RIMBP3CA6NJZ7 1639 aa23.09■■□□□ 1.29
UBB-207ENST00000578649 RIMBP3BA6NNM3 1639 aa23.09■■□□□ 1.29
UBB-207ENST00000578649 RIMBP3Q9UFD9 1639 aa23.09■■□□□ 1.29
UBB-207ENST00000578649 FBLN2P98095 1184 aa23.09■■□□□ 1.29
UBB-207ENST00000578649 CHD1O14646 1710 aa23.08■■□□□ 1.29
UBB-207ENST00000578649 ARHGEF11O15085 1522 aa23.04■■□□□ 1.28
UBB-207ENST00000578649 WDR97A6NE52 1622 aa23.02■■□□□ 1.28
UBB-207ENST00000578649 SNAPC4Q5SXM2 1469 aa23.01■■□□□ 1.27
UBB-207ENST00000578649 GRIN2BQ13224 1484 aa22.96■■□□□ 1.27
UBB-207ENST00000578649 MAGI1Q96QZ7 1491 aaPredicted RBP22.93■■□□□ 1.26
UBB-207ENST00000578649 CHMP7Q8WUX9 453 aaPredicted RBP22.93■■□□□ 1.26
UBB-207ENST00000578649 GAPVD1Q14C86 1478 aa22.91■■□□□ 1.26
UBB-207ENST00000578649 CYB5RLQ6IPT4 315 aa22.9■■□□□ 1.26
UBB-207ENST00000578649 ABCA10Q8WWZ4 1543 aa22.9■■□□□ 1.26
UBB-207ENST00000578649 SYNJ2O15056 1496 aa22.86■■□□□ 1.25
UBB-207ENST00000578649 PBRM1Q86U86 1689 aa22.85■■□□□ 1.25
UBB-207ENST00000578649 ABCA5Q8WWZ7 1642 aa22.85■■□□□ 1.25
UBB-207ENST00000578649 WRNQ14191 1432 aaPredicted RBP eCLIP22.84■■□□□ 1.25
UBB-207ENST00000578649 CLASP1Q7Z460 1538 aa22.84■■□□□ 1.25
UBB-207ENST00000578649 ARAP1Q96P48 1450 aa22.84■■□□□ 1.25
UBB-207ENST00000578649 TOP2BQ02880 1626 aa22.82■■□□□ 1.24
UBB-207ENST00000578649 SYNJ1O43426 1573 aa22.82■■□□□ 1.24
UBB-207ENST00000578649 BIVM-ERCC5R4GMW8 1640 aa22.81■■□□□ 1.24
UBB-207ENST00000578649 GRIN2AQ12879 1464 aa22.66■■□□□ 1.22
UBB-207ENST00000578649 ADAMTS12P58397 1594 aa22.66■■□□□ 1.22
UBB-207ENST00000578649 FHAD1B1AJZ9 1412 aa22.62■■□□□ 1.21
UBB-207ENST00000578649 ERICH3Q5RHP9 1530 aa22.61■■□□□ 1.21
UBB-207ENST00000578649 TRHP20396 242 aaPredicted RBP22.59■■□□□ 1.21
UBB-207ENST00000578649 CEP170Q5SW79 1584 aa22.59■■□□□ 1.21
UBB-207ENST00000578649 NUP160Q12769 1436 aa22.58■■□□□ 1.21
UBB-207ENST00000578649 ERCC6L2Q5T890 1561 aa22.53■■□□□ 1.2
UBB-207ENST00000578649 SHROOM2Q13796 1616 aa22.46■■□□□ 1.19
UBB-207ENST00000578649 IGF1RP08069 1367 aa22.4■■□□□ 1.18
UBB-207ENST00000578649 KIF27Q86VH2 1401 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms