RNA–Protein interactions for RNA: ENST00000428621.5

CLHC1-207, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 2

Gene CLHC1, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-207ENST00000428621 NISCHQ9Y2I1 1504 aa17.1■□□□□ 0.33
CLHC1-207ENST00000428621 AEBP2Q6ZN18 517 aaPredicted RBP16.82■□□□□ 0.28
CLHC1-207ENST00000428621 CHIC1Q5VXU3 224 aa16.55■□□□□ 0.24
CLHC1-207ENST00000428621 CCDC180Q9P1Z9 1646 aa14.7□□□□□ -0.06
CLHC1-207ENST00000428621 PHF23Q9BUL5 403 aaPredicted RBP14.64□□□□□ -0.07
CLHC1-207ENST00000428621 ZCCHC6Q5VYS8 1495 aaKnown RBP14.5□□□□□ -0.09
CLHC1-207ENST00000428621 SHROOM4Q9ULL8 1493 aa14.23□□□□□ -0.13
CLHC1-207ENST00000428621 DCAF1Q9Y4B6 1507 aa14.18□□□□□ -0.14
CLHC1-207ENST00000428621 SENP3Q9H4L4 574 aaPredicted RBP14.17□□□□□ -0.14
CLHC1-207ENST00000428621 SUPT5HO00267 1087 aaKnown RBP13.92□□□□□ -0.18
CLHC1-207ENST00000428621 DCAF8L2P0C7V8 631 aa13.84□□□□□ -0.19
CLHC1-207ENST00000428621 MYO15BQ96JP2 1530 aa13.83□□□□□ -0.19
CLHC1-207ENST00000428621 ABCC9O60706 1549 aa13.69□□□□□ -0.22
CLHC1-207ENST00000428621 SCRIBQ14160 1630 aa13.56□□□□□ -0.24
CLHC1-207ENST00000428621 NACADO15069 1562 aa13.56□□□□□ -0.24
CLHC1-207ENST00000428621 PLPPR3Q6T4P5 718 aa13.54□□□□□ -0.24
CLHC1-207ENST00000428621 RSF1Q96T23 1441 aaPredicted RBP13.45□□□□□ -0.26
CLHC1-207ENST00000428621 RB1CC1Q8TDY2 1594 aa13.36□□□□□ -0.27
CLHC1-207ENST00000428621 CECR2Q9BXF3 1484 aa13.23□□□□□ -0.29
CLHC1-207ENST00000428621 MROH2BQ7Z745 1585 aa13.22□□□□□ -0.29
CLHC1-207ENST00000428621 FOXD1Q16676 465 aa13.18□□□□□ -0.3
CLHC1-207ENST00000428621 BAZ1AQ9NRL2 1556 aaPredicted RBP13.18□□□□□ -0.3
CLHC1-207ENST00000428621 WIZO95785 1651 aa13.12□□□□□ -0.31
CLHC1-207ENST00000428621 HRCP23327 699 aa13.08□□□□□ -0.32
CLHC1-207ENST00000428621 EIF4G1Q04637 1599 aaKnown RBP13.07□□□□□ -0.32
CLHC1-207ENST00000428621 LOC105371045A0A1W2PR82 267 aa13.06□□□□□ -0.32
CLHC1-207ENST00000428621 TRIM41Q8WV44 630 aa13.06□□□□□ -0.32
CLHC1-207ENST00000428621 UNC13AQ9UPW8 1703 aa13.05□□□□□ -0.32
CLHC1-207ENST00000428621 SMARCA4P51532 1647 aa13.05□□□□□ -0.32
CLHC1-207ENST00000428621 TOP2AP11388 1531 aaKnown RBP13.04□□□□□ -0.32
CLHC1-207ENST00000428621 PCGF6Q9BYE7 350 aa13.01□□□□□ -0.33
CLHC1-207ENST00000428621 POTEDQ86YR6 584 aa12.99□□□□□ -0.33
CLHC1-207ENST00000428621 SMARCA2P51531 1590 aa12.92□□□□□ -0.34
CLHC1-207ENST00000428621 BICRAQ9NZM4 1560 aa12.92□□□□□ -0.34
CLHC1-207ENST00000428621 TRIM26Q12899 539 aaPredicted RBP12.9□□□□□ -0.34
CLHC1-207ENST00000428621 PEG3Q9GZU2 1588 aa12.9□□□□□ -0.34
CLHC1-207ENST00000428621 ADRA2BP18089 450 aa12.9□□□□□ -0.34
CLHC1-207ENST00000428621 PPP6R1Q9UPN7 881 aa12.9□□□□□ -0.34
CLHC1-207ENST00000428621 CCDC88BA6NC98 1476 aa12.88□□□□□ -0.35
CLHC1-207ENST00000428621 FAM9AQ8IZU1 332 aaPredicted RBP12.81□□□□□ -0.36
CLHC1-207ENST00000428621 ABCC8Q09428 1581 aa12.77□□□□□ -0.36
CLHC1-207ENST00000428621 EEA1Q15075 1411 aa12.75□□□□□ -0.37
CLHC1-207ENST00000428621 PABPN1Q86U42 306 aaKnown RBP eCLIP12.71□□□□□ -0.38
CLHC1-207ENST00000428621 ATAD2BQ9ULI0 1458 aa12.7□□□□□ -0.38
CLHC1-207ENST00000428621 WRNQ14191 1432 aaPredicted RBP eCLIP12.67□□□□□ -0.38
CLHC1-207ENST00000428621 ZEB1P37275 1124 aaPredicted RBP12.66□□□□□ -0.38
CLHC1-207ENST00000428621 BAZ1BQ9UIG0 1483 aaKnown RBP12.66□□□□□ -0.38
CLHC1-207ENST00000428621 PPARGC1BQ86YN6 1023 aaKnown RBP12.64□□□□□ -0.39
CLHC1-207ENST00000428621 SOGA1O94964 1423 aa12.63□□□□□ -0.39
CLHC1-207ENST00000428621 TNIKQ9UKE5 1360 aa12.62□□□□□ -0.39
CLHC1-207ENST00000428621 CEP162Q5TB80 1403 aa12.6□□□□□ -0.39
CLHC1-207ENST00000428621 SYNJ1O43426 1573 aa12.58□□□□□ -0.39
CLHC1-207ENST00000428621 GOLGA3Q08378 1498 aa12.58□□□□□ -0.4
CLHC1-207ENST00000428621 EHMT2Q96KQ7 1210 aa12.58□□□□□ -0.4
CLHC1-207ENST00000428621 HMGXB3Q12766 1538 aa12.57□□□□□ -0.4
CLHC1-207ENST00000428621 CSRNP3Q8WYN3 585 aa12.56□□□□□ -0.4
CLHC1-207ENST00000428621 KIF21BO75037 1637 aa12.56□□□□□ -0.4
CLHC1-207ENST00000428621 RUSC2Q8N2Y8 1516 aa12.54□□□□□ -0.4
CLHC1-207ENST00000428621 CEP164Q9UPV0 1460 aa12.53□□□□□ -0.4
CLHC1-207ENST00000428621 NCAPD3P42695 1498 aa12.51□□□□□ -0.41
CLHC1-207ENST00000428621 TOP2BQ02880 1626 aa12.5□□□□□ -0.41
CLHC1-207ENST00000428621 PIAS4Q8N2W9 510 aaPredicted RBP12.5□□□□□ -0.41
CLHC1-207ENST00000428621 BIVM-ERCC5R4GMW8 1640 aa12.48□□□□□ -0.41
CLHC1-207ENST00000428621 UBTFP17480 764 aaKnown RBP12.42□□□□□ -0.42
CLHC1-207ENST00000428621 ERICH3Q5RHP9 1530 aa12.39□□□□□ -0.43
CLHC1-207ENST00000428621 CLIP1P30622 1438 aa12.38□□□□□ -0.43
CLHC1-207ENST00000428621 CFTRP13569 1480 aa12.38□□□□□ -0.43
CLHC1-207ENST00000428621 RAPGEF2Q9Y4G8 1499 aa12.37□□□□□ -0.43
CLHC1-207ENST00000428621 VPS8Q8N3P4 1428 aa12.36□□□□□ -0.43
CLHC1-207ENST00000428621 PRXQ9BXM0 1461 aa12.34□□□□□ -0.43
CLHC1-207ENST00000428621 CUX1P39880 1505 aa12.34□□□□□ -0.43
CLHC1-207ENST00000428621 PRDM2Q13029 1718 aa12.34□□□□□ -0.43
CLHC1-207ENST00000428621 CCER1Q8TC90 406 aaPredicted RBP12.3□□□□□ -0.44
CLHC1-207ENST00000428621 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.28□□□□□ -0.44
CLHC1-207ENST00000428621 KIF27Q86VH2 1401 aa12.28□□□□□ -0.44
CLHC1-207ENST00000428621 ARAP1Q96P48 1450 aa12.22□□□□□ -0.45
CLHC1-207ENST00000428621 CADPSQ9ULU8 1353 aa12.21□□□□□ -0.45
CLHC1-207ENST00000428621 TTBK1Q5TCY1 1321 aaPredicted RBP12.2□□□□□ -0.46
CLHC1-207ENST00000428621 APLP2Q06481 763 aa12.17□□□□□ -0.46
CLHC1-207ENST00000428621 CC2D2AQ9P2K1 1620 aa12.16□□□□□ -0.46
CLHC1-207ENST00000428621 CUX2O14529 1486 aa12.13□□□□□ -0.47
CLHC1-207ENST00000428621 FGD5Q6ZNL6 1462 aa12.12□□□□□ -0.47
CLHC1-207ENST00000428621 ARHGAP35Q9NRY4 1499 aa12.12□□□□□ -0.47
CLHC1-207ENST00000428621 IGF1RP08069 1367 aa12.1□□□□□ -0.47
CLHC1-207ENST00000428621 FANCD2Q9BXW9 1451 aa12.09□□□□□ -0.47
CLHC1-207ENST00000428621 RRBP1Q9P2E9 1410 aaKnown RBP12.08□□□□□ -0.47
CLHC1-207ENST00000428621 DNMBPQ6XZF7 1577 aa12.08□□□□□ -0.48
CLHC1-207ENST00000428621 MAP3K1Q13233 1512 aa12.08□□□□□ -0.48
CLHC1-207ENST00000428621 CLSPNQ9HAW4 1339 aa12.05□□□□□ -0.48
CLHC1-207ENST00000428621 ABCA10Q8WWZ4 1543 aa12.05□□□□□ -0.48
CLHC1-207ENST00000428621 HNRNPUL2Q1KMD3 747 aaKnown RBP12.04□□□□□ -0.48
CLHC1-207ENST00000428621 CARMIL1Q5VZK9 1371 aa12.04□□□□□ -0.48
CLHC1-207ENST00000428621 RANGAP1P46060 587 aaPredicted RBP12.03□□□□□ -0.48
CLHC1-207ENST00000428621 DIEXFQ68CQ4 756 aaKnown RBP12.02□□□□□ -0.48
CLHC1-207ENST00000428621 TOPBP1Q92547 1522 aa12.02□□□□□ -0.49
CLHC1-207ENST00000428621 TIAM1Q13009 1591 aa12.01□□□□□ -0.49
CLHC1-207ENST00000428621 LAMC3Q9Y6N6 1575 aa12.01□□□□□ -0.49
CLHC1-207ENST00000428621 MSH5O43196 834 aa12.01□□□□□ -0.49
CLHC1-207ENST00000428621 CUL7Q14999 1698 aa12.01□□□□□ -0.49
CLHC1-207ENST00000428621 POLA1P09884 1462 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms